2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set498
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801410
Aaa>Gaa290195
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460309
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290129
Aag>Gag280167
Aag>Mag4041
Aag>Rag2021
Aag>Tag13085
Aag>Wag1010
Aat>Cat4701611
Aat>Gat11404211
Aat>Mat1010
Aat>Rat5050
Aat>Tat190164
Aat>Wat150151
Aca>Cca7076
Aca>Gca950349
Aca>Rca2020
Aca>Tca330237
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200108
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1011
Acg>Gcg220149
Acg>Rcg2020
Act>Cct17075
Act>Gct12305112
Act>Mct2020
Act>Rct3030
Act>Tct600169
Act>Wct120120
Aga>Cga9101210
Aga>Gga110118
Aga>Tga2020
Agc>Ggc4003010
Agc>Rgc2020
Agg>Cgg32099
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710712
Agt>Ggt10904710
Agt>Mgt360364
Agt>Rgt2020
Agt>Tgt2501310
Agt>Wgt1011
Ata>Cta8081
Ata>Gta12405712
Ata>Rta2020
Ata>Tta200155
Atc>Ctc1701210
Atc>Gtc6703110
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150158
Atg>Gtg630518
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170127
Atg>Wtg1010
Att>Ctt3501410
Att>Gtt500032719
Att>Mtt3031
Att>Rtt6061
Att>Ttt230135
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1011
Caa>Aaa6303610
Caa>Gaa620249
Caa>Maa2020
Caa>Saa1010
Caa>Taa260206
Caa>Yaa9082
Cac>Aac13087
Cac>Gac1010
Cac>Tac9809711
Cac>Yac5050
Cag>Aag390158
Cag>Gag260129
Cag>Mag3030
Cag>Tag12065
Cag>Yag3031
Cat>Aat17099
Cat>Gat1010
Cat>Mat2020
Cat>Tat171016511
Cat>Yat100100
Cca>Aca250149
Cca>Gca5055
Cca>Mca2020
Cca>Sca1010
Cca>Tca494047624
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340344
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240243
Cct>Act190174
Cct>Gct19098
Cct>Mct5050
Cct>Tct170016117
Cct>Yct6050
Cga>Aga19099
Cga>Yga1010
Cgc>Agc6062
Cgc>Ggc1010
Cgc>Tgc240242
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1010
Cgt>Tgt16701643
Cgt>Ygt4041
Cta>Ata340168
Cta>Gta2022
Cta>Tta822822498498
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc193011712
Ctc>Ytc6061
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg17208011
Ctg>Ytg1010
Ctt>Att380314
Ctt>Gtt200106
Ctt>Stt3031
Ctt>Ttt625037332
Ctt>Ytt160161
GAa>CCa3033
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa8405111
Gaa>Caa330208
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa1901810
Gac>Aac294028239
Gac>Cac170175
Gac>Kac3031
Gac>Sac2022
Gac>Tac11601156
Gag>Aag350196
Gag>Cag9098
Gag>Dag1011
Gag>Rag1010
Gag>Tag10095
Gat>Aat7305010
Gat>Cat360358
Gat>Kat130120
Gat>Rat3030
Gat>Tat190017811
Gca>Aca245021118
Gca>Cca1501010
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606616
Gcc>Acc400309
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160133
Gcg>Acg1801310
Gcg>Kcg1010
Gcg>Tcg2102117
Gct>Act16508913
Gct>Cct24085
Gct>Kct240220
Gct>Rct8080
Gct>Sct2020
Gct>Tct200015012
Gga>Aga320320
Gga>Cga16470164714
Gga>Rga160164
Gga>Sga100100
Gga>Tga6060
Ggc>Agc3503511
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390390
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt281024411
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660653
Gta>Ata315020218
Gta>Cta6063
Gta>Kta9081
Gta>Rta1010
Gta>Tta304029914
Gtc>Atc7202710
Gtc>Ctc6061
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450458
Gtg>Atg5302210
Gtg>Ctg18901894
Gtg>Stg1010
Gtg>Ttg11401149
Gtt>Att327011412
Gtt>Ctt4502010
Gtt>Ktt100101
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt232022916
TAt>GTt7070
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160150
Tac>Cac490396
Tac>Gac2020
Tac>Yac140141
Tat>Aat9095
Tat>Cat1901910
Tat>Gat5054
Tat>Kat1010
Tat>Yat3031
Tca>Aca4701410
Tca>Cca6403410
Tca>Gca530189
Tca>Kca1010
Tca>Wca1010
Tca>Yca4041
Tcc>Acc120119
Tcc>Ccc5052
Tcc>Gcc260129
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420119
Tct>Cct260219
Tct>Gct6701811
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14095
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620169
Tta>Cta60105112
Tta>Gta240118
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc890798
Ttc>Gtc8085
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370119
Ttg>Ctg567020613
Ttg>Gtg160158
Ttg>Ytg8081
Ttt>Att17095
Ttt>Ctt230020515
Ttt>Gtt2701910
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3031
aAa>aCa190119
aAa>aGa10205515
aAa>aRa1011
aAa>aTa19085
aAa>aWa2020
aAc>aCc210118
aAc>aGc5103010
aAc>aMc2020
aAc>aRc1011
aAc>aTc8086
aAc>aWc3030
aAg>aCg180128
aAg>aGg223020615
aAg>aMg1010
aAg>aRg5051
aAg>aTg18085
aAg>aWg1010
aAt>aCt11605013
aAt>aGt11707310
aAt>aMt2020
aAt>aRt6062
aAt>aTt9085
aAt>aWt4040
aCa>aAa164014611
aCa>aBa1010
aCa>aGa150109
aCa>aMa3030
aCa>aTa345033323
aCa>aYa210211
aCc>aAc12075
aCc>aGc9088
aCc>aTc26970266369
aCc>aYc6060
aCg>aAg1011
aCg>aGg4044
aCg>aTg276027412
aCg>aYg4040
aCt>aAt7205623
aCt>aGt330108
aCt>aSt1010
aCt>aTt691061135
aCt>aYt240243
aGA>aAC2022
aGa>aAa8303411
aGa>aCa2902411
aGa>aKa4040
aGa>aRa6060
aGa>aSa2020
aGa>aTa460465
aGc>aAc150106
aGc>aCc7077
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190192
aGg>aAg17150170722
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt13307511
aGt>aCt950419
aGt>aKt110110
aGt>aRt1010
aGt>aSt350354
aGt>aTt154014915
aTa>aAa3030
aTa>aCa9206611
aTa>aGa7065
aTa>aYa2020
aTc>aAc1011
aTc>aCc6206110
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210211
aTg>aDg1010
aTg>aGg4043
aTg>aKg2020
aTt>aAt7076
aTt>aCt7404413
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310198
aaA>aaG762013512
aaA>aaM1010
aaA>aaR6061
aaA>aaT420188
aaA>aaW2021
aaC>aaA130135
aaC>aaG7076
aaC>aaM2020
aaC>aaT1281071529
aaC>aaY240220
aaG>aaA66104411
aaG>aaC150150
aaG>aaK4040
aaG>aaR3030
aaG>aaT168015110
aaT>aaA610169
aaT>aaC761015810
aaT>aaG160117
aaT>aaK1011
aaT>aaW3031
aaT>aaY9090
acA>acC12701110
acA>acG205012413
acA>acM2020
acA>acR4040
acA>acT56902712
acA>acW1010
acC>acA11701610
acC>acG10055
acC>acM2020
acC>acT379020720
acC>acY130133
acG>acA14702510
acG>acC6064
acG>acK1010
acG>acR3030
acG>acT9506211
acT>acA52402011
acT>acC406011621
acT>acG750259
acT>acW2020
acT>acY7070
agA>agC23085
agA>agG19703011
agA>agM1010
agA>agR7073
agA>agT4101310
agC>agA560561
agC>agM4040
agC>agT17970170045
agC>agY2020
agG>agA18410166424
agG>agC1010
agG>agK2020
agG>agR100100
agG>agT2902410
agT>agA420119
agT>agC15002810
agT>agG9074
agT>agW1010
agT>agY2020
atA>atC450109
atA>atG180188
atA>atM2020
atA>atR1010
atA>atT31401110
atA>atW1010
atC>atA1080259
atC>atG9055
atC>atM2020
atC>atT589033160
atC>atY4040
atG>atA9509211
atG>atC120123
atG>atK9091
atG>atR2020
atG>atT232021414
atT>atA34801311
atT>atC26003411
atT>atG120129
atT>atW210120
atT>atY3030
cAa>cCa460159
cAa>cGa440348
cAa>cMa5050
cAa>cRa1010
cAa>cTa180189
cAa>cWa1010
cAc>cGc3030
cAg>cCg21066
cAg>cGg240197
cAg>cTg130108
cAg>cWg1011
cAt>cCt1010
cAt>cGt560565
cAt>cMt5040
cAt>cRt3031
cAt>cTt4040
cAt>cWt1010
cCa>cAa210139
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa165016510
cCa>cYa150150
cCc>cAc1011
cCc>cGc2021
cCc>cTc18201821
cCc>cYc5050
cCg>cTg7072
cCg>cYg1010
cCt>cAt290125
cCt>cGt5051
cCt>cTt812608053410
cCt>cYt240240
cGa>cTa3030
cGc>cAc200201
cGc>cTc9090
cGg>cAg6062
cGg>cCg3031
cGt>cAt170173
cGt>cKt1010
cGt>cTt240240
cTa>cAa1010
cTa>cCa9099
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320321
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2021
cTg>cWg1010
cTt>cAt250206
cTt>cCt170154
cTt>cDt1010
cTt>cGt110105
cTt>cWt2020
cTt>cYt9091
caA>caC3301910
caA>caG42504511
caA>caM2020
caA>caR5050
caA>caT370169
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT30909812
caC>caY5050
caG>caA46005210
caG>caC250238
caG>caK110110
caG>caR1010
caG>caT326403211344
caT>caA9064
caT>caC358015211
caT>caG9095
caT>caK1010
caT>caY6060
ccA>ccC5701510
ccA>ccG9704914
ccA>ccM1010
ccA>ccR5050
ccA>ccT37203111
ccA>ccW2020
ccC>ccA4501310
ccC>ccG10099
ccC>ccM1010
ccC>ccT20708510
ccC>ccY3030
ccG>ccA5202310
ccG>ccC100109
ccG>ccK5050
ccG>ccT149012211
ccT>ccA34901810
ccT>ccC15404911
ccT>ccG7001910
ccT>ccW3030
ccT>ccY5050
cgA>cgC5053
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130109
cgC>cgT10303910
cgC>cgY1011
cgG>cgA320139
cgG>cgC9099
cgG>cgR1010
cgG>cgT270169
cgT>cgA650109
cgT>cgC444037319
cgT>cgG16065
cgT>cgY4040
ctA>ctC4301010
ctA>ctG9801310
ctA>ctR1011
ctA>ctT16101710
ctA>ctW3030
ctC>ctA8401210
ctC>ctG580159
ctC>ctM1010
ctC>ctT16560136927
ctC>ctY180181
ctG>ctA11502010
ctG>ctC2001010
ctG>ctK2020
ctG>ctT7104710
ctT>ctA33102010
ctT>ctC320010331
ctT>ctG19402710
ctT>ctK1010
ctT>ctY3030
gAa>gCa150124
gAa>gGa610545
gAa>gRa2020
gAa>gTa19097
gAa>gWa1010
gAc>gCc130136
gAc>gGc160129
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt400158
gAt>gGt698506848394
gAt>gMt1010
gAt>gRt260261
gAt>gTt160154
gAt>gWt2020
gCa>gAa1301210
gCa>gGa11065
gCa>gMa1010
gCa>gTa306030216
gCa>gYa160150
gCc>gAc9098
gCc>gGc7075
gCc>gTc8408414
gCc>gYc3031
gCg>gAg3033
gCg>gTg220220
gCg>gYg2020
gCt>gAt350206
gCt>gGt690697
gCt>gMt120122
gCt>gSt1010
gCt>gTt853078131
gCt>gYt240241
gGa>gAa200200
gGa>gKa140144
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301521
gGc>gAc188018811
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6060
gGg>gAg9093
gGg>gTg1011
gGt>gAt5103012
gGt>gCt8083
gGt>gKt430311
gGt>gRt1010
gGt>gTt940088218
gTa>gAa1010
gTa>gCa5102510
gTa>gGa5055
gTa>gYa2020
gTc>gAc2020
gTc>gCc7507011
gTc>gGc4044
gTc>gKc1010
gTc>gYc3031
gTg>gAg4043
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1010
gTt>gAt210107
gTt>gCt8904911
gTt>gGt3002010
gTt>gKt400406
gTt>gWt2021
gTt>gYt2020
gaA>gaC680286
gaA>gaG48506311
gaA>gaM1010
gaA>gaR9092
gaA>gaT12601511
gaA>gaW160141
gaC>gaA9507310
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045731
gaC>gaY140140
gaG>gaA42308513
gaG>gaC250129
gaG>gaK7070
gaG>gaS1010
gaG>gaT9407817
gaT>gaA296019413
gaT>gaC760017914
gaT>gaG540189
gaT>gaW2020
gaT>gaY100101
gcA>gcC7701410
gcA>gcG6902610
gcA>gcR1010
gcA>gcT42506611
gcA>gcW110112
gcC>gcA14402211
gcC>gcG150109
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011118
gcC>gcY6062
gcG>gcA12801710
gcG>gcC2401910
gcG>gcK1010
gcG>gcR2020
gcG>gcT9405411
gcT>gcA47901512
gcT>gcC588029617
gcT>gcG6901410
gcT>gcS1011
gcT>gcW2021
gcT>gcY9090
ggA>ggC200169
ggA>ggG7504210
ggA>ggR1010
ggA>ggT320013113
ggC>ggA5801811
ggC>ggG7077
ggC>ggT425010313
ggC>ggY2021
ggG>ggA8803111
ggG>ggC150109
ggG>ggT2402415
ggT>ggA26601511
ggT>ggC30304213
ggT>ggG460129
ggT>ggW1010
ggT>ggY3030
gtA>gtC7601010
gtA>gtG25207211
gtA>gtR3030
gtA>gtT41001510
gtC>gtA17509110
gtC>gtG38098
gtC>gtM1010
gtC>gtT502021719
gtC>gtY7070
gtG>gtA25106913
gtG>gtC10402811
gtG>gtK6061
gtG>gtR3031
gtG>gtT288012910
gtT>gtA39201610
gtT>gtC35306413
gtT>gtG27201710
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc320119
tAc>tWc1010
tAt>tCt1011
tAt>tGt11420113922
tAt>tMt1010
tAt>tRt1011
tAt>tTt260119
tAt>tWt2020
tCa>tGa17076
tCa>tMa1010
tCa>tTa10590104396
tCa>tYa110110
tCc>tAc100109
tCc>tGc6065
tCc>tTc500502
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg390396
tCg>tYg3030
tCt>tAt390398
tCt>tGt100105
tCt>tMt8080
tCt>tTt227022722
tCt>tYt220221
tGc>tAc130135
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280280
tGt>tAt220222
tGt>tCt3020
tGt>tKt5041
tGt>tRt1010
tGt>tTt300306
tTa>tAa9093
tTa>tCa16710166742
tTa>tGa6065
tTa>tWa2020
tTa>tYa9091
tTc>tAc9064
tTc>tCc140149
tTc>tGc160115
tTc>tYc1010
tTg>tAg9098
tTg>tCg5054
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt183013810
tTt>tCt4001510
tTt>tGt140147
tTt>tKt2020
tTt>tWt1010
tTt>tYt100103
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT22560165772
taC>taY200202
taG>taT1010
taT>taA4040
taT>taC799020810
taT>taG540542
taT>taK4043
taT>taY3030
tcA>tcC860109
tcA>tcG9203512
tcA>tcR3030
tcA>tcT38701910
tcA>tcW1010
tcC>tcA530148
tcC>tcG8086
tcC>tcT340018241
tcC>tcY5050
tcG>tcA2802210
tcG>tcC8088
tcG>tcT4803210
tcT>tcA41301610
tcT>tcC16603110
tcT>tcG220119
tcT>tcY2020
tgA>tgG2021
tgC>tgA1010
tgC>tgT331013315
tgC>tgY7070
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190191
tgT>tgA3030
tgT>tgC35803310
tgT>tgG2020
tgT>tgK3032
tgT>tgY3030
ttA>ttC8001110
ttA>ttG951058826
ttA>ttR4040
ttA>ttT29101710
ttA>ttW1010
ttC>ttA240198
ttC>ttG100108
ttC>ttS2020
ttC>ttT774207066398
ttC>ttY320311
ttG>ttA43406513
ttG>ttC6001612
ttG>ttK160160
ttG>ttS1011
ttG>ttT14180128736
ttT>ttA5703610
ttT>ttC64005811
ttT>ttG5053
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: Cta>Tta