2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set30
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa280149
Aaa>Gaa290195
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460308
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290128
Aag>Gag280166
Aag>Mag4040
Aag>Rag2021
Aag>Tag13085
Aag>Wag1010
Aat>Cat470169
Aat>Gat1140429
Aat>Mat1010
Aat>Rat5050
Aat>Tat190163
Aat>Wat150150
Aca>Cca7076
Aca>Gca950348
Aca>Rca2020
Aca>Tca330236
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200108
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1010
Acg>Gcg220148
Acg>Rcg2020
Act>Cct17075
Act>Gct1230519
Act>Mct2020
Act>Rct3030
Act>Tct600168
Act>Wct120120
Aga>Cga910129
Aga>Gga110118
Aga>Tga2020
Agc>Ggc400308
Agc>Rgc2020
Agg>Cgg32098
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710712
Agt>Ggt1090479
Agt>Mgt360360
Agt>Rgt2020
Agt>Tgt250138
Agt>Wgt1010
Ata>Cta8080
Ata>Gta1240579
Ata>Rta2020
Ata>Tta200155
Atc>Ctc170129
Atc>Gtc670319
Atc>Mtc1010
Atc>Ttc3031
Atg>Ctg150159
Atg>Gtg630516
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170127
Atg>Wtg1010
Att>Ctt3501410
Att>Gtt50003279
Att>Mtt3030
Att>Rtt6060
Att>Ttt230135
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa630369
Caa>Gaa620249
Caa>Maa2020
Caa>Saa1010
Caa>Taa260206
Caa>Yaa9080
Cac>Aac13087
Cac>Gac1010
Cac>Tac980978
Cac>Yac5050
Cag>Aag390158
Cag>Gag260128
Cag>Mag3030
Cag>Tag12065
Cag>Yag3030
Cat>Aat17099
Cat>Gat1010
Cat>Mat2020
Cat>Tat17101656
Cat>Yat100100
Cca>Aca250148
Cca>Gca5053
Cca>Mca2020
Cca>Sca1010
Cca>Tca494047611
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340343
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240240
Cct>Act190175
Cct>Gct19098
Cct>Mct5050
Cct>Tct17001619
Cct>Yct6050
Cga>Aga19098
Cga>Yga1010
Cgc>Agc6062
Cgc>Ggc1010
Cgc>Tgc240240
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1010
Cgt>Tgt16701641
Cgt>Ygt4040
Cta>Ata340168
Cta>Gta2021
Cta>Tta82204989
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc19301179
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg1720809
Ctg>Ytg1010
Ctt>Att380315
Ctt>Gtt200105
Ctt>Stt3030
Ctt>Ttt625037310
Ctt>Ytt160160
GAa>CCa3032
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa840519
Gaa>Caa330209
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190188
Gac>Aac29402829
Gac>Cac170175
Gac>Kac3030
Gac>Sac2020
Gac>Tac11601151
Gag>Aag350196
Gag>Cag9098
Gag>Dag1010
Gag>Rag1010
Gag>Tag10095
Gat>Aat730509
Gat>Cat360359
Gat>Kat130120
Gat>Rat3030
Gat>Tat19001786
Gca>Aca24502119
Gca>Cca150109
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606610
Gcc>Acc40403030
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160133
Gcg>Acg180139
Gcg>Kcg1010
Gcg>Tcg210213
Gct>Act16508911
Gct>Cct24085
Gct>Kct240220
Gct>Rct8080
Gct>Sct2020
Gct>Tct20001508
Gga>Aga320320
Gga>Cga1647016472
Gga>Rga160160
Gga>Sga100100
Gga>Tga6060
Ggc>Agc350357
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390390
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt281024410
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100102
Ggt>Tgt660651
Gta>Ata315020210
Gta>Cta6061
Gta>Kta9081
Gta>Rta1010
Gta>Tta30402999
Gtc>Atc720278
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450455
Gtg>Atg5302211
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg11401149
Gtt>Att32701149
Gtt>Ctt4502010
Gtt>Ktt100100
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt23202297
TAt>GTt7070
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160150
Tac>Cac490397
Tac>Gac2020
Tac>Yac140140
Tat>Aat9095
Tat>Cat190199
Tat>Gat5053
Tat>Kat1010
Tat>Yat3030
Tca>Aca470149
Tca>Cca640349
Tca>Gca530188
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120118
Tcc>Ccc5052
Tcc>Gcc260129
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420118
Tct>Cct260219
Tct>Gct670189
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14096
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620169
Tta>Cta6010519
Tta>Gta240118
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc890795
Ttc>Gtc8085
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370118
Ttg>Ctg567020612
Ttg>Gtg160157
Ttg>Ytg8080
Ttt>Att17095
Ttt>Ctt23002059
Ttt>Gtt270198
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190119
aAa>aGa1020559
aAa>aRa1010
aAa>aTa19086
aAa>aWa2020
aAc>aCc210117
aAc>aGc510309
aAc>aMc2020
aAc>aRc1010
aAc>aTc8085
aAc>aWc3030
aAg>aCg180128
aAg>aGg22302069
aAg>aMg1010
aAg>aRg5050
aAg>aTg18086
aAg>aWg1010
aAt>aCt1160509
aAt>aGt1170739
aAt>aMt2020
aAt>aRt6060
aAt>aTt9085
aAt>aWt4040
aCa>aAa164014610
aCa>aBa1010
aCa>aGa150108
aCa>aMa3030
aCa>aTa345033310
aCa>aYa210210
aCc>aAc12075
aCc>aGc9088
aCc>aTc26970266313
aCc>aYc6060
aCg>aAg1011
aCg>aGg4043
aCg>aTg27602748
aCg>aYg4040
aCt>aAt720568
aCt>aGt330108
aCt>aSt1010
aCt>aTt691061111
aCt>aYt240240
aGA>aAC2022
aGa>aAa830349
aGa>aCa290249
aGa>aKa4040
aGa>aRa6060
aGa>aSa2020
aGa>aTa460465
aGc>aAc150106
aGc>aCc7075
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190190
aGg>aAg17150170710
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330759
aGt>aCt950418
aGt>aKt110110
aGt>aRt1010
aGt>aSt350350
aGt>aTt15401498
aTa>aAa3030
aTa>aCa920669
aTa>aGa7065
aTa>aYa2020
aTc>aAc1011
aTc>aCc620619
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210210
aTg>aDg1010
aTg>aGg4043
aTg>aKg2020
aTt>aAt7076
aTt>aCt740449
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310198
aaA>aaG76201359
aaA>aaM1010
aaA>aaR6060
aaA>aaT420188
aaA>aaW2020
aaC>aaA130135
aaC>aaG7076
aaC>aaM2020
aaC>aaT1281071511
aaC>aaY240220
aaG>aaA6610449
aaG>aaC150150
aaG>aaK4040
aaG>aaR3030
aaG>aaT16801515
aaT>aaA610168
aaT>aaC76101589
aaT>aaG160117
aaT>aaK1010
aaT>aaW3030
aaT>aaY9090
acA>acC1270119
acA>acG20501249
acA>acM2020
acA>acR4040
acA>acT5690279
acA>acW1010
acC>acA1170169
acC>acG10055
acC>acM2020
acC>acT379020711
acC>acY130130
acG>acA1470259
acG>acC6063
acG>acK1010
acG>acR3030
acG>acT950629
acT>acA5240209
acT>acC406011610
acT>acG750259
acT>acW2020
acT>acY7070
agA>agC23085
agA>agG1970309
agA>agM1010
agA>agR7070
agA>agT410139
agC>agA560560
agC>agM4040
agC>agT17970170015
agC>agY2020
agG>agA18410166411
agG>agC1010
agG>agK2020
agG>agR100100
agG>agT290248
agT>agA420118
agT>agC1500289
agT>agG9074
agT>agW1010
agT>agY2020
atA>atC450108
atA>atG180188
atA>atM2020
atA>atR1010
atA>atT3140119
atA>atW1010
atC>atA1080258
atC>atG9055
atC>atM2020
atC>atT58903319
atC>atY4040
atG>atA950929
atG>atC120123
atG>atK9090
atG>atR2020
atG>atT23202148
atT>atA3480139
atT>atC2600349
atT>atG120127
atT>atW210120
atT>atY3030
cAa>cCa460159
cAa>cGa4403414
cAa>cMa5050
cAa>cRa1010
cAa>cTa180186
cAa>cWa1010
cAc>cGc3030
cAg>cCg21066
cAg>cGg240195
cAg>cTg130108
cAg>cWg1010
cAt>cCt1010
cAt>cGt560565
cAt>cMt5040
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210138
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa16501656
cCa>cYa150150
cCc>cAc1011
cCc>cGc2020
cCc>cTc18201820
cCc>cYc5050
cCg>cTg7071
cCg>cYg1010
cCt>cAt290125
cCt>cGt5050
cCt>cTt81260805326
cCt>cYt240240
cGa>cTa3030
cGc>cAc200201
cGc>cTc9090
cGg>cAg6062
cGg>cCg3030
cGt>cAt170171
cGt>cKt1010
cGt>cTt240240
cTa>cAa1010
cTa>cCa9098
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320321
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2021
cTg>cWg1010
cTt>cAt250206
cTt>cCt170154
cTt>cDt1010
cTt>cGt110105
cTt>cWt2020
cTt>cYt9090
caA>caC330199
caA>caG4250459
caA>caM2020
caA>caR5050
caA>caT370169
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT3090989
caC>caY5050
caG>caA4600529
caG>caC250238
caG>caK110110
caG>caR1010
caG>caT32640321113
caT>caA9063
caT>caC35801529
caT>caG9095
caT>caK1010
caT>caY6060
ccA>ccC570159
ccA>ccG970499
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720319
ccA>ccW2020
ccC>ccA450139
ccC>ccG10098
ccC>ccM1010
ccC>ccT2070859
ccC>ccY3030
ccG>ccA520239
ccG>ccC100108
ccG>ccK5050
ccG>ccT14901228
ccT>ccA3490189
ccT>ccC1540499
ccT>ccG700199
ccT>ccW3030
ccT>ccY5050
cgA>cgC5053
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130108
cgC>cgT1030399
cgC>cgY1010
cgG>cgA320138
cgG>cgC9098
cgG>cgR1010
cgG>cgT270168
cgT>cgA650108
cgT>cgC44403739
cgT>cgG16065
cgT>cgY4040
ctA>ctC430109
ctA>ctG980139
ctA>ctR1010
ctA>ctT1610179
ctA>ctW3030
ctC>ctA8401210
ctC>ctG580159
ctC>ctM1010
ctC>ctT16560136916
ctC>ctY180180
ctG>ctA1150209
ctG>ctC200109
ctG>ctK2020
ctG>ctT710479
ctT>ctA3310209
ctT>ctC32001039
ctT>ctG1940279
ctT>ctK1010
ctT>ctY3030
gAa>gCa150124
gAa>gGa610545
gAa>gRa2020
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc160128
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt400158
gAt>gGt69850684817
gAt>gMt1010
gAt>gRt260260
gAt>gTt160154
gAt>gWt2020
gCa>gAa130129
gCa>gGa11065
gCa>gMa1010
gCa>gTa30603027
gCa>gYa160150
gCc>gAc9098
gCc>gGc7075
gCc>gTc840845
gCc>gYc3030
gCg>gAg3033
gCg>gTg220220
gCg>gYg2020
gCt>gAt350206
gCt>gGt690695
gCt>gMt120120
gCt>gSt1010
gCt>gTt853078111
gCt>gYt240240
gGa>gAa200201
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301520
gGc>gAc18801886
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6061
gGg>gAg9093
gGg>gTg1010
gGt>gAt510308
gGt>gCt8083
gGt>gKt430310
gGt>gRt1010
gGt>gTt94008822
gTa>gAa1010
gTa>gCa510259
gTa>gGa5055
gTa>gYa2020
gTc>gAc2021
gTc>gCc750709
gTc>gGc4043
gTc>gKc1010
gTc>gYc3030
gTg>gAg4043
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1010
gTt>gAt210107
gTt>gCt8904910
gTt>gGt300208
gTt>gKt400400
gTt>gWt2020
gTt>gYt2020
gaA>gaC680286
gaA>gaG4850639
gaA>gaM1010
gaA>gaR9090
gaA>gaT1260159
gaA>gaW160140
gaC>gaA950738
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045711
gaC>gaY140140
gaG>gaA42308511
gaG>gaC250128
gaG>gaK7070
gaG>gaS1010
gaG>gaT940789
gaT>gaA29601948
gaT>gaC76001799
gaT>gaG540188
gaT>gaW2020
gaT>gaY100100
gcA>gcC770149
gcA>gcG6902610
gcA>gcR1010
gcA>gcT4250669
gcA>gcW110110
gcC>gcA1440229
gcC>gcG150108
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011110
gcC>gcY6060
gcG>gcA1280179
gcG>gcC240198
gcG>gcK1010
gcG>gcR2020
gcG>gcT940549
gcT>gcA4790159
gcT>gcC588029610
gcT>gcG690149
gcT>gcS1010
gcT>gcW2020
gcT>gcY9090
ggA>ggC200168
ggA>ggG750429
ggA>ggR1010
ggA>ggT32001318
ggC>ggA580189
ggC>ggG7077
ggC>ggT42501039
ggC>ggY2020
ggG>ggA880319
ggG>ggC150108
ggG>ggT240248
ggT>ggA26601510
ggT>ggC3030429
ggT>ggG460128
ggT>ggW1010
ggT>ggY3030
gtA>gtC760109
gtA>gtG2520729
gtA>gtR3030
gtA>gtT4100159
gtC>gtA1750918
gtC>gtG38098
gtC>gtM1010
gtC>gtT502021710
gtC>gtY7070
gtG>gtA25106910
gtG>gtC1040289
gtG>gtK6060
gtG>gtR3030
gtG>gtT28801299
gtT>gtA3920169
gtT>gtC3530649
gtT>gtG2720179
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc320118
tAc>tWc1010
tAt>tCt1010
tAt>tGt11420113911
tAt>tMt1010
tAt>tRt1010
tAt>tTt260119
tAt>tWt2020
tCa>tGa17076
tCa>tMa1010
tCa>tTa10590104310
tCa>tYa110110
tCc>tAc100108
tCc>tGc6065
tCc>tTc500501
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg390395
tCg>tYg3030
tCt>tAt390395
tCt>tGt100105
tCt>tMt8080
tCt>tTt227022710
tCt>tYt220220
tGc>tAc130135
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280280
tGt>tAt220223
tGt>tCt3020
tGt>tKt5040
tGt>tRt1010
tGt>tTt300305
tTa>tAa9093
tTa>tCa16710166715
tTa>tGa6065
tTa>tWa2020
tTa>tYa9090
tTc>tAc9063
tTc>tCc140149
tTc>tGc160115
tTc>tYc1010
tTg>tAg9098
tTg>tCg5054
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt18301389
tTt>tCt400159
tTt>tGt140147
tTt>tKt2020
tTt>tWt1010
tTt>tYt100100
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT22560165714
taC>taY200200
taG>taT1010
taT>taA4041
taT>taC79902089
taT>taG540540
taT>taK4040
taT>taY3030
tcA>tcC860108
tcA>tcG920359
tcA>tcR3030
tcA>tcT38701910
tcA>tcW1010
tcC>tcA530148
tcC>tcG8086
tcC>tcT340018210
tcC>tcY5050
tcG>tcA280229
tcG>tcC8088
tcG>tcT480329
tcT>tcA41301610
tcT>tcC1660319
tcT>tcG220118
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT331013310
tgC>tgY7070
tgG>tgA2021
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190190
tgT>tgA3030
tgT>tgC3580339
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800118
ttA>ttG951058810
ttA>ttR4040
ttA>ttT2910179
ttA>ttW1010
ttC>ttA240199
ttC>ttG100108
ttC>ttS2020
ttC>ttT77420706617
ttC>ttY320310
ttG>ttA4340659
ttG>ttC600169
ttG>ttK160160
ttG>ttS1010
ttG>ttT1418012879
ttT>ttA5703610
ttT>ttC6400589
ttT>ttG5053
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: Gcc>Acc