2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set1647
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1010
AAt>CTt1010
ACa>GAa2020
AaA>CaT3030
Aaa>Caa280140
Aaa>Gaa290192
Aaa>Maa2020
Aaa>Taa14070
Aaa>Waa1010
Aac>Cac7071
Aac>Gac460307
Aac>Mac2020
Aac>Rac1011
Aac>Tac10081
Aac>Wac1010
Aag>Cag290120
Aag>Gag280160
Aag>Mag4042
Aag>Rag2020
Aag>Tag13080
Aag>Wag1010
Aat>Cat470160
Aat>Gat11404214
Aat>Mat1010
Aat>Rat5052
Aat>Tat190160
Aat>Wat150159
Aca>Cca7070
Aca>Gca950342
Aca>Rca2020
Aca>Tca3302313
Aca>Wca1010
Acc>Ccc1010
Acc>Gcc200100
Acc>Rcc1010
Acc>Tcc9080
Acc>Wcc1010
Acg>Gcg220142
Acg>Rcg2020
Act>Cct17070
Act>Gct1230511
Act>Mct2020
Act>Rct3031
Act>Tct600162
Act>Wct120128
Aga>Cga910120
Aga>Gga110111
Aga>Tga2021
Agc>Ggc400300
Agc>Rgc2020
Agg>Cgg32090
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710713
Agt>Ggt1090475
Agt>Mgt360360
Agt>Rgt2020
Agt>Tgt250132
Agt>Wgt1010
Ata>Cta8082
Ata>Gta1240572
Ata>Rta2020
Ata>Tta200150
Atc>Ctc170120
Atc>Gtc670311
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150150
Atg>Gtg630511
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170120
Atg>Wtg1010
Att>Ctt350140
Att>Gtt50003271
Att>Mtt3030
Att>Rtt6061
Att>Ttt230130
CAT>TTG3030
CAa>ACa1010
CCa>AAa5050
CTt>GGt1010
Caa>Aaa630368
Caa>Gaa620242
Caa>Maa2021
Caa>Saa1010
Caa>Taa260201
Caa>Yaa9083
Cac>Aac13081
Cac>Gac1010
Cac>Tac980976
Cac>Yac5051
Cag>Aag390150
Cag>Gag260120
Cag>Mag3030
Cag>Tag12060
Cag>Yag3030
Cat>Aat17090
Cat>Gat1010
Cat>Mat2020
Cat>Tat171016521
Cat>Yat100104
Cca>Aca250141
Cca>Gca5050
Cca>Mca2020
Cca>Sca1010
Cca>Tca494047622
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc3403414
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240243
Cct>Act190174
Cct>Gct19090
Cct>Mct5050
Cct>Tct170016134
Cct>Yct6052
Cga>Aga19090
Cga>Yga1010
Cgc>Agc6060
Cgc>Ggc1010
Cgc>Tgc240246
Cgc>Ygc4040
Cgg>Agg20050
Cgg>Tgg5050
Cgt>Agt62080
Cgt>Ggt1011
Cgt>Tgt16701645
Cgt>Ygt4040
Cta>Ata340160
Cta>Gta2020
Cta>Tta822049814
Cta>Yta5050
Ctc>Atc3031
Ctc>Gtc1010
Ctc>Mtc8086
Ctc>Ttc193011711
Ctc>Ytc6060
Ctg>Atg7074
Ctg>Gtg8080
Ctg>Mtg1011
Ctg>Ttg1720803
Ctg>Ytg1010
Ctt>Att380314
Ctt>Gtt200100
Ctt>Stt3030
Ctt>Ttt625037368
Ctt>Ytt160162
GAa>CCa3030
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa840515
Gaa>Caa330200
Gaa>Kaa3030
Gaa>Raa8082
Gaa>Saa1011
Gaa>Taa190181
Gac>Aac29402820
Gac>Cac170170
Gac>Kac3030
Gac>Sac2020
Gac>Tac11601155
Gag>Aag350190
Gag>Cag9090
Gag>Dag1010
Gag>Rag1010
Gag>Tag10090
Gat>Aat730505
Gat>Cat360351
Gat>Kat130124
Gat>Rat3030
Gat>Tat190017847
Gca>Aca24502112
Gca>Cca150100
Gca>Kca4040
Gca>Rca100100
Gca>Tca1060669
Gcc>Acc400302
Gcc>Ccc10050
Gcc>Kcc1010
Gcc>Rcc4041
Gcc>Tcc160134
Gcg>Acg180131
Gcg>Kcg1010
Gcg>Tcg210210
Gct>Act16508911
Gct>Cct24080
Gct>Kct2402211
Gct>Rct8082
Gct>Sct2020
Gct>Tct200015056
Gga>Aga320322
Gga>Cga1647164716471647
Gga>Rga160160
Gga>Sga100100
Gga>Tga6061
Ggc>Agc350357
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390394
Ggg>Agg8080
Ggg>Tgg1010
Ggt>Agt2810244134
Ggt>Cgt4030
Ggt>Kgt7071
Ggt>Rgt100101
Ggt>Tgt660652
Gta>Ata315020210
Gta>Cta6061
Gta>Kta9081
Gta>Rta1010
Gta>Tta304029912
Gtc>Atc720270
Gtc>Ctc6062
Gtc>Ktc1011
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450456
Gtg>Atg530222
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg114011423
Gtt>Att32701145
Gtt>Ctt450201
Gtt>Ktt100101
Gtt>Rtt4041
Gtt>Stt2020
Gtt>Ttt232022940
TAt>GTt7070
TGc>GAc1010
TTa>AAa1010
TTa>CAa1010
TTa>CCa1010
TTg>GGg2020
TTt>CAt2020
TTt>CCt1010
Tac>Aac160150
Tac>Cac490396
Tac>Gac2020
Tac>Yac140141
Tat>Aat9091
Tat>Cat190194
Tat>Gat5050
Tat>Kat1010
Tat>Yat3031
Tca>Aca470140
Tca>Cca640340
Tca>Gca530180
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120111
Tcc>Ccc5050
Tcc>Gcc260120
Tcc>Wcc3031
Tcc>Ycc1010
Tcg>Acg13080
Tcg>Gcg10050
Tct>Act420110
Tct>Cct260210
Tct>Gct670180
Tct>Wct1010
Tga>Aga1011
Tgc>Agc1010
Tgc>Cgc5050
Tgc>Ggc6060
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5051
Tgg>Cgg1010
Tgg>Wgg2022
Tgt>Agt14090
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1011
Tgt>Ygt3031
Tta>Ata620162
Tta>Cta6010511
Tta>Gta240110
Tta>Kta1010
Tta>Yta5054
Ttc>Atc3030
Ttc>Ctc890791
Ttc>Gtc8080
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370111
Ttg>Ctg56702062
Ttg>Gtg160150
Ttg>Ytg8081
Ttt>Att17090
Ttt>Ctt23002054
Ttt>Gtt270190
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190110
aAa>aGa1020553
aAa>aRa1010
aAa>aTa19080
aAa>aWa2021
aAc>aCc210110
aAc>aGc510302
aAc>aMc2020
aAc>aRc1010
aAc>aTc8080
aAc>aWc3030
aAg>aCg180121
aAg>aGg22302061
aAg>aMg1010
aAg>aRg5051
aAg>aTg18080
aAg>aWg1010
aAt>aCt1160509
aAt>aGt11707310
aAt>aMt2020
aAt>aRt6062
aAt>aTt9080
aAt>aWt4040
aCa>aAa16401464
aCa>aBa1010
aCa>aGa150100
aCa>aMa3030
aCa>aTa345033341
aCa>aYa210215
aCc>aAc12070
aCc>aGc9080
aCc>aTc2697026638
aCc>aYc6061
aCg>aAg1010
aCg>aGg4040
aCg>aTg2760274231
aCg>aYg4041
aCt>aAt7205622
aCt>aGt330100
aCt>aSt1011
aCt>aTt691061184
aCt>aYt240245
aGA>aAC2020
aGa>aAa830340
aGa>aCa290240
aGa>aKa4040
aGa>aRa6063
aGa>aSa2020
aGa>aTa460467
aGc>aAc150101
aGc>aCc7070
aGc>aKc1010
aGc>aRc2020
aGc>aSc1011
aGc>aTc190191
aGg>aAg1715017071645
aGg>aCg1010
aGg>aKg2022
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330750
aGt>aCt950413
aGt>aKt110111
aGt>aRt1011
aGt>aSt350350
aGt>aTt15401495
aTa>aAa3031
aTa>aCa9206626
aTa>aGa7060
aTa>aYa2020
aTc>aAc1010
aTc>aCc6206134
aTc>aGc1010
aTc>aYc2021
aTg>aAg4040
aTg>aCg210213
aTg>aDg1010
aTg>aGg4041
aTg>aKg2020
aTt>aAt7070
aTt>aCt740442
aTt>aGt4040
aTt>aWt1010
aTt>aYt6061
aaA>aaC310192
aaA>aaG76201351
aaA>aaM1010
aaA>aaR6063
aaA>aaT420180
aaA>aaW2020
aaC>aaA130130
aaC>aaG7070
aaC>aaM2020
aaC>aaT1281071543
aaC>aaY240221
aaG>aaA6610443
aaG>aaC150151
aaG>aaK4040
aaG>aaR3030
aaG>aaT168015130
aaT>aaA610160
aaT>aaC761015889
aaT>aaG160110
aaT>aaK1010
aaT>aaW3030
aaT>aaY9091
acA>acC1270111
acA>acG20501246
acA>acM2020
acA>acR4040
acA>acT5690270
acA>acW1011
acC>acA1170160
acC>acG10050
acC>acM2020
acC>acT3790207110
acC>acY130132
acG>acA1470251
acG>acC6060
acG>acK1010
acG>acR3030
acG>acT950624
acT>acA5240202
acT>acC406011625
acT>acG7502510
acT>acW2020
acT>acY7072
agA>agC23080
agA>agG19703012
agA>agM1010
agA>agR7070
agA>agT410131
agC>agA560560
agC>agM4040
agC>agT1797017003
agC>agY2020
agG>agA1841016641645
agG>agC1010
agG>agK2020
agG>agR100101
agG>agT290240
agT>agA420110
agT>agC1500280
agT>agG9070
agT>agW1010
agT>agY2020
atA>atC450100
atA>atG180181
atA>atM2022
atA>atR1010
atA>atT3140110
atA>atW1010
atC>atA1080250
atC>atG9050
atC>atM2020
atC>atT589033155
atC>atY4041
atG>atA950922
atG>atC120120
atG>atK9092
atG>atR2020
atG>atT232021428
atT>atA3480130
atT>atC2600344
atT>atG120120
atT>atW2101210
atT>atY3031
cAa>cCa460154
cAa>cGa440343
cAa>cMa5052
cAa>cRa1010
cAa>cTa180181
cAa>cWa1010
cAc>cGc3030
cAg>cCg21060
cAg>cGg240191
cAg>cTg130100
cAg>cWg1010
cAt>cCt1010
cAt>cGt560561
cAt>cMt5040
cAt>cRt3030
cAt>cTt4041
cAt>cWt1010
cCa>cAa210132
cCa>cGa2010
cCa>cMa1010
cCa>cSa1011
cCa>cTa165016515
cCa>cYa150150
cCc>cAc1010
cCc>cGc2020
cCc>cTc18201821
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290120
cCt>cGt5050
cCt>cTt8126080531636
cCt>cYt240242
cGa>cTa3030
cGc>cAc200202
cGc>cTc9096
cGg>cAg6060
cGg>cCg3030
cGt>cAt170175
cGt>cKt1010
cGt>cTt240247
cTa>cAa1010
cTa>cCa9090
cTa>cWa1011
cTa>cYa2020
cTc>cAc3030
cTc>cCc320325
cTc>cWc1010
cTc>cYc1010
cTg>cAg5050
cTg>cCg2021
cTg>cGg2020
cTg>cWg1010
cTt>cAt250200
cTt>cCt170153
cTt>cDt1010
cTt>cGt110101
cTt>cWt2021
cTt>cYt9091
caA>caC330192
caA>caG4250453
caA>caM2020
caA>caR5050
caA>caT370160
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT3090982
caC>caY5051
caG>caA4600528
caG>caC250230
caG>caK110111
caG>caR1011
caG>caT32640321131
caT>caA9061
caT>caC35801520
caT>caG9090
caT>caK1010
caT>caY6060
ccA>ccC570154
ccA>ccG970491
ccA>ccM1010
ccA>ccR5050
ccA>ccT37203112
ccA>ccW2020
ccC>ccA450130
ccC>ccG10090
ccC>ccM1010
ccC>ccT2070851
ccC>ccY3031
ccG>ccA520233
ccG>ccC100100
ccG>ccK5051
ccG>ccT149012211
ccT>ccA3490180
ccT>ccC1540495
ccT>ccG700191
ccT>ccW3030
ccT>ccY5052
cgA>cgC5052
cgA>cgG6060
cgA>cgR1010
cgA>cgT26061
cgC>cgA130100
cgC>cgT1030395
cgC>cgY1010
cgG>cgA320130
cgG>cgC9090
cgG>cgR1011
cgG>cgT270161
cgT>cgA650100
cgT>cgC44403733
cgT>cgG16060
cgT>cgY4040
ctA>ctC430100
ctA>ctG980130
ctA>ctR1010
ctA>ctT1610172
ctA>ctW3031
ctC>ctA840120
ctC>ctG580150
ctC>ctM1011
ctC>ctT165601369115
ctC>ctY180183
ctG>ctA1150201
ctG>ctC200100
ctG>ctK2020
ctG>ctT7104714
ctT>ctA3310202
ctT>ctC32001037
ctT>ctG1940271
ctT>ctK1010
ctT>ctY3032
gAa>gCa150120
gAa>gGa610540
gAa>gRa2020
gAa>gTa19090
gAa>gWa1010
gAc>gCc130130
gAc>gGc160121
gAc>gMc2020
gAc>gRc1010
gAc>gTc3030
gAg>gCg16060
gAg>gGg120120
gAg>gMg1010
gAg>gTg4040
gAg>gWg1010
gAt>gCt400150
gAt>gGt6985068481644
gAt>gMt1010
gAt>gRt260261
gAt>gTt160150
gAt>gWt2021
gCa>gAa130120
gCa>gGa11060
gCa>gMa1010
gCa>gTa306030219
gCa>gYa160153
gCc>gAc9090
gCc>gGc7071
gCc>gTc8408419
gCc>gYc3030
gCg>gAg3030
gCg>gTg220222
gCg>gYg2021
gCt>gAt350200
gCt>gGt690690
gCt>gMt120121
gCt>gSt1010
gCt>gTt853078183
gCt>gYt240245
gGa>gAa200200
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301522
gGc>gAc18801881
gGc>gCc1010
gGc>gKc3031
gGc>gRc6061
gGc>gTc6062
gGg>gAg9090
gGg>gTg1010
gGt>gAt510303
gGt>gCt8081
gGt>gKt430317
gGt>gRt1010
gGt>gTt940088210
gTa>gAa1010
gTa>gCa510253
gTa>gGa5050
gTa>gYa2020
gTc>gAc2020
gTc>gCc750700
gTc>gGc4040
gTc>gKc1010
gTc>gYc3031
gTg>gAg4040
gTg>gCg160110
gTg>gGg5050
gTg>gKg1010
gTg>gYg1010
gTt>gAt210100
gTt>gCt890491
gTt>gGt300206
gTt>gKt400401
gTt>gWt2021
gTt>gYt2021
gaA>gaC680280
gaA>gaG48506313
gaA>gaM1010
gaA>gaR9091
gaA>gaT1260152
gaA>gaW1601411
gaC>gaA9507340
gaC>gaG5050
gaC>gaM2020
gaC>gaT952045740
gaC>gaY140143
gaG>gaA42308535
gaG>gaC250120
gaG>gaK7070
gaG>gaS1011
gaG>gaT9407815
gaT>gaA29601940
gaT>gaC760017916
gaT>gaG540183
gaT>gaW2020
gaT>gaY100102
gcA>gcC770142
gcA>gcG690263
gcA>gcR1010
gcA>gcT4250663
gcA>gcW110110
gcC>gcA1440228
gcC>gcG150100
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011110
gcC>gcY6060
gcG>gcA1280170
gcG>gcC240190
gcG>gcK1010
gcG>gcR2021
gcG>gcT940545
gcT>gcA4790150
gcT>gcC58802965
gcT>gcG690141
gcT>gcS1010
gcT>gcW2020
gcT>gcY9091
ggA>ggC200160
ggA>ggG750426
ggA>ggR1010
ggA>ggT32001312
ggC>ggA580180
ggC>ggG7070
ggC>ggT42501037
ggC>ggY2020
ggG>ggA880314
ggG>ggC150101
ggG>ggT240241
ggT>ggA2660150
ggT>ggC3030423
ggT>ggG460120
ggT>ggW1011
ggT>ggY3030
gtA>gtC760100
gtA>gtG25207226
gtA>gtR3031
gtA>gtT4100150
gtC>gtA1750910
gtC>gtG38090
gtC>gtM1010
gtC>gtT502021737
gtC>gtY7071
gtG>gtA2510691
gtG>gtC1040280
gtG>gtK6063
gtG>gtR3031
gtG>gtT288012917
gtT>gtA3920161
gtT>gtC35306411
gtT>gtG2720170
gtT>gtK1010
gtT>gtY2021
tAc>tCc5050
tAc>tGc210210
tAc>tTc320110
tAc>tWc1010
tAt>tCt1010
tAt>tGt11420113925
tAt>tMt1010
tAt>tRt1010
tAt>tTt260110
tAt>tWt2020
tCa>tGa17070
tCa>tMa1010
tCa>tTa10590104311
tCa>tYa110110
tCc>tAc100100
tCc>tGc6060
tCc>tTc500509
tCc>tYc6061
tCg>tAg3030
tCg>tGg1010
tCg>tTg390398
tCg>tYg3030
tCt>tAt390390
tCt>tGt100100
tCt>tMt8084
tCt>tTt227022737
tCt>tYt220223
tGc>tAc130130
tGc>tTc10091
tGg>tCg2021
tGg>tKg2021
tGg>tTg2802813
tGt>tAt220222
tGt>tCt3020
tGt>tKt5041
tGt>tRt1010
tGt>tTt300303
tTa>tAa9090
tTa>tCa1671016670
tTa>tGa6060
tTa>tWa2020
tTa>tYa9091
tTc>tAc9060
tTc>tCc140140
tTc>tGc160113
tTc>tYc1010
tTg>tAg9090
tTg>tCg5050
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt18301383
tTt>tCt400151
tTt>tGt140142
tTt>tKt2020
tTt>tWt1010
tTt>tYt100100
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT22560165791
taC>taY200203
taG>taT1010
taT>taA4040
taT>taC799020821
taT>taG5405419
taT>taK4040
taT>taY3031
tcA>tcC860100
tcA>tcG920353
tcA>tcR3031
tcA>tcT3870191
tcA>tcW1010
tcC>tcA530140
tcC>tcG8080
tcC>tcT340018218
tcC>tcY5053
tcG>tcA280221
tcG>tcC8080
tcG>tcT480323
tcT>tcA4130161
tcT>tcC1660311
tcT>tcG220110
tcT>tcY2022
tgA>tgG2020
tgC>tgA1010
tgC>tgT331013323
tgC>tgY7071
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190197
tgT>tgA3031
tgT>tgC3580331
tgT>tgG2020
tgT>tgK3030
tgT>tgY3031
ttA>ttC800110
ttA>ttG951058810
ttA>ttR4041
ttA>ttT2910170
ttA>ttW1011
ttC>ttA240190
ttC>ttG100100
ttC>ttS2020
ttC>ttT7742070661646
ttC>ttY320312
ttG>ttA4340659
ttG>ttC600160
ttG>ttK160160
ttG>ttS1010
ttG>ttT14180128738
ttT>ttA570360
ttT>ttC6400586
ttT>ttG5051
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: Gga>Cga