2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set244
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa280149
Aaa>Gaa290196
Aaa>Maa2020
Aaa>Taa14076
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460309
Aac>Mac2020
Aac>Rac1010
Aac>Tac10081
Aac>Wac1010
Aag>Cag290129
Aag>Gag280166
Aag>Mag4040
Aag>Rag2020
Aag>Tag13086
Aag>Wag1010
Aat>Cat470169
Aat>Gat1140429
Aat>Mat1010
Aat>Rat5050
Aat>Tat190164
Aat>Wat150150
Aca>Cca7076
Aca>Gca950349
Aca>Rca2020
Aca>Tca330237
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200108
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1010
Acg>Gcg220148
Acg>Rcg2021
Act>Cct17075
Act>Gct12305110
Act>Mct2020
Act>Rct3030
Act>Tct600169
Act>Wct120120
Aga>Cga910129
Aga>Gga110118
Aga>Tga2020
Agc>Ggc4003010
Agc>Rgc2020
Agg>Cgg32098
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4041
Agt>Cgt710712
Agt>Ggt10904711
Agt>Mgt360361
Agt>Rgt2020
Agt>Tgt250138
Agt>Wgt1010
Ata>Cta8080
Ata>Gta12405710
Ata>Rta2020
Ata>Tta200156
Atc>Ctc170129
Atc>Gtc670319
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150158
Atg>Gtg630515
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170128
Atg>Wtg1010
Att>Ctt350149
Att>Gtt500032714
Att>Mtt3030
Att>Rtt6061
Att>Ttt230135
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303613
Caa>Gaa6202410
Caa>Maa2020
Caa>Saa1010
Caa>Taa260207
Caa>Yaa9082
Cac>Aac13087
Cac>Gac1010
Cac>Tac980978
Cac>Yac5050
Cag>Aag390159
Cag>Gag260129
Cag>Mag3030
Cag>Tag12066
Cag>Yag3030
Cat>Aat17099
Cat>Gat1010
Cat>Mat2020
Cat>Tat171016513
Cat>Yat100101
Cca>Aca250148
Cca>Gca5053
Cca>Mca2020
Cca>Sca1010
Cca>Tca494047616
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340343
Ccg>Acg2021
Ccg>Gcg1010
Ccg>Tcg240240
Cct>Act190175
Cct>Gct19098
Cct>Mct5050
Cct>Tct170016122
Cct>Yct6050
Cga>Aga19098
Cga>Yga1010
Cgc>Agc6063
Cgc>Ggc1010
Cgc>Tgc240241
Cgc>Ygc4041
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1010
Cgt>Tgt16701645
Cgt>Ygt4040
Cta>Ata340168
Cta>Gta2021
Cta>Tta822049811
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1011
Ctc>Mtc8080
Ctc>Ttc193011711
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg17208010
Ctg>Ytg1010
Ctt>Att380316
Ctt>Gtt200105
Ctt>Stt3030
Ctt>Ttt625037320
Ctt>Ytt160160
GAa>CCa3032
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa8405110
Gaa>Caa330209
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190188
Gac>Aac29402829
Gac>Cac170176
Gac>Kac3030
Gac>Sac2020
Gac>Tac11601151
Gag>Aag350196
Gag>Cag9098
Gag>Dag1010
Gag>Rag1010
Gag>Tag10095
Gat>Aat7305010
Gat>Cat360359
Gat>Kat130120
Gat>Rat3030
Gat>Tat190017843
Gca>Aca245021110
Gca>Cca150109
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606612
Gcc>Acc4003010
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160133
Gcg>Acg180139
Gcg>Kcg1010
Gcg>Tcg210213
Gct>Act16508915
Gct>Cct24086
Gct>Kct240220
Gct>Rct8081
Gct>Sct2020
Gct>Tct200015028
Gga>Aga320322
Gga>Cga164701647134
Gga>Rga160160
Gga>Sga100100
Gga>Tga6060
Ggc>Agc350357
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390391
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt281281244244
Ggt>Cgt4031
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660652
Gta>Ata315020215
Gta>Cta6061
Gta>Kta9081
Gta>Rta1010
Gta>Tta304029917
Gtc>Atc720278
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450455
Gtg>Atg5302210
Gtg>Ctg18901894
Gtg>Stg1010
Gtg>Ttg11401149
Gtt>Att327011413
Gtt>Ctt4502010
Gtt>Ktt100100
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt232022911
TAt>GTt7070
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160151
Tac>Cac4903911
Tac>Gac2021
Tac>Yac140140
Tat>Aat9096
Tat>Cat1901910
Tat>Gat5053
Tat>Kat1010
Tat>Yat3030
Tca>Aca4701410
Tca>Cca6403410
Tca>Gca530188
Tca>Kca1010
Tca>Wca1011
Tca>Yca4040
Tcc>Acc120119
Tcc>Ccc5052
Tcc>Gcc260128
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420118
Tct>Cct260218
Tct>Gct670189
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5051
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14095
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620169
Tta>Cta60105110
Tta>Gta240119
Tta>Kta1010
Tta>Yta5051
Ttc>Atc3030
Ttc>Ctc890795
Ttc>Gtc8086
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370118
Ttg>Ctg567020615
Ttg>Gtg160157
Ttg>Ytg8080
Ttt>Att17096
Ttt>Ctt230020517
Ttt>Gtt270198
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa1901110
aAa>aGa1020559
aAa>aRa1010
aAa>aTa19086
aAa>aWa2020
aAc>aCc210118
aAc>aGc5103011
aAc>aMc2020
aAc>aRc1010
aAc>aTc8085
aAc>aWc3030
aAg>aCg180128
aAg>aGg223020611
aAg>aMg1010
aAg>aRg5050
aAg>aTg18086
aAg>aWg1010
aAt>aCt1160509
aAt>aGt11707311
aAt>aMt2020
aAt>aRt6060
aAt>aTt9085
aAt>aWt4040
aCa>aAa164014613
aCa>aBa1010
aCa>aGa150109
aCa>aMa3030
aCa>aTa345033320
aCa>aYa210210
aCc>aAc12076
aCc>aGc9088
aCc>aTc26970266352
aCc>aYc6060
aCg>aAg1011
aCg>aGg4043
aCg>aTg276027413
aCg>aYg4041
aCt>aAt720569
aCt>aGt330109
aCt>aSt1010
aCt>aTt691061170
aCt>aYt240240
aGA>aAC2022
aGa>aAa830349
aGa>aCa290249
aGa>aKa4040
aGa>aRa6060
aGa>aSa2021
aGa>aTa460465
aGc>aAc150106
aGc>aCc7075
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190190
aGg>aAg171501707145
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330759
aGt>aCt950418
aGt>aKt110111
aGt>aRt1011
aGt>aSt350351
aGt>aTt154014910
aTa>aAa3030
aTa>aCa920669
aTa>aGa7066
aTa>aYa2020
aTc>aAc1011
aTc>aCc6206112
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210212
aTg>aDg1010
aTg>aGg4043
aTg>aKg2020
aTt>aAt7077
aTt>aCt740449
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310199
aaA>aaG762013510
aaA>aaM1010
aaA>aaR6060
aaA>aaT420188
aaA>aaW2020
aaC>aaA130135
aaC>aaG7076
aaC>aaM2020
aaC>aaT1281071520
aaC>aaY240220
aaG>aaA66104410
aaG>aaC150152
aaG>aaK4040
aaG>aaR3030
aaG>aaT16801518
aaT>aaA610169
aaT>aaC761015823
aaT>aaG160116
aaT>aaK1010
aaT>aaW3030
aaT>aaY9091
acA>acC1270119
acA>acG205012415
acA>acM2020
acA>acR4040
acA>acT5690279
acA>acW1010
acC>acA1170169
acC>acG10055
acC>acM2020
acC>acT3790207105
acC>acY130131
acG>acA1470259
acG>acC6063
acG>acK1010
acG>acR3030
acG>acT9506210
acT>acA52402011
acT>acC406011611
acT>acG7502516
acT>acW2021
acT>acY7071
agA>agC23085
agA>agG19703011
agA>agM1010
agA>agR7071
agA>agT410139
agC>agA560563
agC>agM4040
agC>agT17970170026
agC>agY2020
agG>agA184101664144
agG>agC1011
agG>agK2020
agG>agR100100
agG>agT290249
agT>agA420118
agT>agC1500289
agT>agG9074
agT>agW1010
agT>agY2020
atA>atC450108
atA>atG180188
atA>atM2020
atA>atR1011
atA>atT3140119
atA>atW1010
atC>atA1080258
atC>atG9055
atC>atM2020
atC>atT589033120
atC>atY4040
atG>atA9509211
atG>atC120123
atG>atK9090
atG>atR2020
atG>atT232021414
atT>atA3480139
atT>atC26003410
atT>atG120127
atT>atW210120
atT>atY3030
cAa>cCa460158
cAa>cGa440348
cAa>cMa5052
cAa>cRa1010
cAa>cTa180187
cAa>cWa1010
cAc>cGc3030
cAg>cCg21066
cAg>cGg240196
cAg>cTg130108
cAg>cWg1010
cAt>cCt1010
cAt>cGt560565
cAt>cMt5040
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210138
cCa>cGa2011
cCa>cMa1010
cCa>cSa1010
cCa>cTa16501657
cCa>cYa150150
cCc>cAc1011
cCc>cGc2020
cCc>cTc18201824
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290125
cCt>cGt5051
cCt>cTt812608053217
cCt>cYt240241
cGa>cTa3030
cGc>cAc200200
cGc>cTc9090
cGg>cAg6062
cGg>cCg3030
cGt>cAt170171
cGt>cKt1010
cGt>cTt240240
cTa>cAa1010
cTa>cCa9098
cTa>cWa1010
cTa>cYa2020
cTc>cAc3031
cTc>cCc320324
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2021
cTg>cWg1010
cTt>cAt250206
cTt>cCt170154
cTt>cDt1010
cTt>cGt110106
cTt>cWt2020
cTt>cYt9091
caA>caC330199
caA>caG42504510
caA>caM2020
caA>caR5050
caA>caT3701610
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT30909810
caC>caY5050
caG>caA4600529
caG>caC250239
caG>caK110110
caG>caR1010
caG>caT32640321160
caT>caA9063
caT>caC358015211
caT>caG9095
caT>caK1010
caT>caY6060
ccA>ccC570159
ccA>ccG970499
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720319
ccA>ccW2020
ccC>ccA450139
ccC>ccG10098
ccC>ccM1010
ccC>ccT20708510
ccC>ccY3031
ccG>ccA5202310
ccG>ccC100109
ccG>ccK5050
ccG>ccT14901228
ccT>ccA3490189
ccT>ccC15404912
ccT>ccG7001910
ccT>ccW3030
ccT>ccY5052
cgA>cgC5053
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130108
cgC>cgT10303910
cgC>cgY1010
cgG>cgA320138
cgG>cgC9098
cgG>cgR1010
cgG>cgT270168
cgT>cgA650108
cgT>cgC444037311
cgT>cgG16065
cgT>cgY4040
ctA>ctC430109
ctA>ctG980139
ctA>ctR1010
ctA>ctT16101710
ctA>ctW3030
ctC>ctA840129
ctC>ctG580159
ctC>ctM1010
ctC>ctT16560136928
ctC>ctY180182
ctG>ctA1150209
ctG>ctC200109
ctG>ctK2020
ctG>ctT7104710
ctT>ctA3310209
ctT>ctC320010316
ctT>ctG19402710
ctT>ctK1010
ctT>ctY3030
gAa>gCa150124
gAa>gGa610546
gAa>gRa2020
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc160128
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt400158
gAt>gGt698506848201
gAt>gMt1010
gAt>gRt260260
gAt>gTt160155
gAt>gWt2020
gCa>gAa130129
gCa>gGa11066
gCa>gMa1010
gCa>gTa306030212
gCa>gYa160151
gCc>gAc9099
gCc>gGc7076
gCc>gTc840845
gCc>gYc3030
gCg>gAg3033
gCg>gTg220220
gCg>gYg2020
gCt>gAt350206
gCt>gGt690698
gCt>gMt120120
gCt>gSt1010
gCt>gTt853078119
gCt>gYt240241
gGa>gAa200200
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301520
gGc>gAc18801888
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6061
gGg>gAg9093
gGg>gTg1010
gGt>gAt510309
gGt>gCt8084
gGt>gKt430310
gGt>gRt1010
gGt>gTt940088212
gTa>gAa1010
gTa>gCa5102510
gTa>gGa5055
gTa>gYa2020
gTc>gAc2021
gTc>gCc750709
gTc>gGc4043
gTc>gKc1010
gTc>gYc3030
gTg>gAg4043
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1010
gTt>gAt210106
gTt>gCt890499
gTt>gGt300209
gTt>gKt400402
gTt>gWt2020
gTt>gYt2020
gaA>gaC680286
gaA>gaG48506310
gaA>gaM1010
gaA>gaR9090
gaA>gaT1260159
gaA>gaW160140
gaC>gaA9507310
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045711
gaC>gaY140141
gaG>gaA42308513
gaG>gaC250128
gaG>gaK7070
gaG>gaS1010
gaG>gaT9407810
gaT>gaA296019411
gaT>gaC760017910
gaT>gaG5401812
gaT>gaW2020
gaT>gaY100100
gcA>gcC770149
gcA>gcG6902610
gcA>gcR1010
gcA>gcT4250669
gcA>gcW110111
gcC>gcA1440229
gcC>gcG150108
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011112
gcC>gcY6060
gcG>gcA1280179
gcG>gcC240198
gcG>gcK1010
gcG>gcR2020
gcG>gcT9405412
gcT>gcA4790159
gcT>gcC588029612
gcT>gcG6901410
gcT>gcS1010
gcT>gcW2020
gcT>gcY9090
ggA>ggC200168
ggA>ggG750429
ggA>ggR1010
ggA>ggT320013110
ggC>ggA5801813
ggC>ggG7077
ggC>ggT425010312
ggC>ggY2020
ggG>ggA880319
ggG>ggC150108
ggG>ggT240248
ggT>ggA2660159
ggT>ggC30304212
ggT>ggG460129
ggT>ggW1010
ggT>ggY3030
gtA>gtC760109
gtA>gtG25207214
gtA>gtR3030
gtA>gtT4100159
gtC>gtA1750918
gtC>gtG38098
gtC>gtM1010
gtC>gtT502021712
gtC>gtY7071
gtG>gtA2510699
gtG>gtC10402810
gtG>gtK6060
gtG>gtR3030
gtG>gtT288012918
gtT>gtA39201611
gtT>gtC3530649
gtT>gtG2720179
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc320119
tAc>tWc1010
tAt>tCt1010
tAt>tGt11420113917
tAt>tMt1010
tAt>tRt1010
tAt>tTt260119
tAt>tWt2020
tCa>tGa17077
tCa>tMa1010
tCa>tTa10590104315
tCa>tYa110110
tCc>tAc100108
tCc>tGc6066
tCc>tTc500501
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg390396
tCg>tYg3030
tCt>tAt390396
tCt>tGt100106
tCt>tMt8080
tCt>tTt227022711
tCt>tYt220220
tGc>tAc130135
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280283
tGt>tAt220223
tGt>tCt3021
tGt>tKt5040
tGt>tRt1010
tGt>tTt300305
tTa>tAa9093
tTa>tCa16710166726
tTa>tGa6065
tTa>tWa2020
tTa>tYa9090
tTc>tAc9063
tTc>tCc140149
tTc>tGc160115
tTc>tYc1011
tTg>tAg9099
tTg>tCg5054
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt183013810
tTt>tCt4001510
tTt>tGt140148
tTt>tKt2020
tTt>tWt1010
tTt>tYt100100
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT22560165766
taC>taY200200
taG>taT1010
taT>taA4040
taT>taC799020824
taT>taG540540
taT>taK4040
taT>taY3031
tcA>tcC860108
tcA>tcG920359
tcA>tcR3030
tcA>tcT38701910
tcA>tcW1010
tcC>tcA530148
tcC>tcG8087
tcC>tcT340018210
tcC>tcY5050
tcG>tcA280229
tcG>tcC8088
tcG>tcT480329
tcT>tcA4130169
tcT>tcC1660319
tcT>tcG220118
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT331013310
tgC>tgY7071
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190190
tgT>tgA3030
tgT>tgC3580339
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800118
ttA>ttG951058821
ttA>ttR4040
ttA>ttT29101710
ttA>ttW1010
ttC>ttA240199
ttC>ttG100108
ttC>ttS2020
ttC>ttT774207066207
ttC>ttY320311
ttG>ttA43406515
ttG>ttC600169
ttG>ttK160160
ttG>ttS1010
ttG>ttT14180128737
ttT>ttA5703610
ttT>ttC64005811
ttT>ttG5053
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: Ggt>Agt