2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set146
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa280149
Aaa>Gaa290196
Aaa>Maa2020
Aaa>Taa14076
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460309
Aac>Mac2020
Aac>Rac1010
Aac>Tac10081
Aac>Wac1010
Aag>Cag290129
Aag>Gag280168
Aag>Mag4040
Aag>Rag2020
Aag>Tag13086
Aag>Wag1010
Aat>Cat470169
Aat>Gat1140429
Aat>Mat1011
Aat>Rat5050
Aat>Tat190164
Aat>Wat150150
Aca>Cca7076
Aca>Gca950349
Aca>Rca2021
Aca>Tca330237
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200108
Acc>Rcc1011
Acc>Tcc9088
Acc>Wcc1010
Acg>Gcg220149
Acg>Rcg2022
Act>Cct17075
Act>Gct12305111
Act>Mct2022
Act>Rct3031
Act>Tct600169
Act>Wct120120
Aga>Cga910129
Aga>Gga110118
Aga>Tga2020
Agc>Ggc400308
Agc>Rgc2020
Agg>Cgg32098
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4041
Agt>Cgt710712
Agt>Ggt1090479
Agt>Mgt3603621
Agt>Rgt2020
Agt>Tgt250138
Agt>Wgt1010
Ata>Cta8080
Ata>Gta12405712
Ata>Rta2021
Ata>Tta200156
Atc>Ctc170129
Atc>Gtc670319
Atc>Mtc1011
Atc>Ttc3031
Atg>Ctg150158
Atg>Gtg630515
Atg>Mtg3030
Atg>Rtg3031
Atg>Ttg170128
Atg>Wtg1010
Att>Ctt3501410
Att>Gtt500032712
Att>Mtt3030
Att>Rtt6061
Att>Ttt230135
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303610
Caa>Gaa6202410
Caa>Maa2020
Caa>Saa1010
Caa>Taa260207
Caa>Yaa9081
Cac>Aac13087
Cac>Gac1010
Cac>Tac980979
Cac>Yac5050
Cag>Aag390159
Cag>Gag260129
Cag>Mag3031
Cag>Tag12066
Cag>Yag3031
Cat>Aat17099
Cat>Gat1010
Cat>Mat2021
Cat>Tat17101656
Cat>Yat100101
Cca>Aca250148
Cca>Gca5053
Cca>Mca2020
Cca>Sca1011
Cca>Tca494047610
Cca>Yca7071
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340343
Ccg>Acg2021
Ccg>Gcg1010
Ccg>Tcg240240
Cct>Act190176
Cct>Gct19098
Cct>Mct5052
Cct>Tct17001619
Cct>Yct6050
Cga>Aga19098
Cga>Yga1010
Cgc>Agc6063
Cgc>Ggc1010
Cgc>Tgc240240
Cgc>Ygc4042
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1010
Cgt>Tgt16701642
Cgt>Ygt4040
Cta>Ata340168
Cta>Gta2021
Cta>Tta822049811
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1011
Ctc>Mtc8080
Ctc>Ttc193011710
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg1720809
Ctg>Ytg1010
Ctt>Att380315
Ctt>Gtt200105
Ctt>Stt3032
Ctt>Ttt62503739
Ctt>Ytt160164
GAa>CCa3032
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa8405111
Gaa>Caa3302011
Gaa>Kaa3031
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190188
Gac>Aac29402827
Gac>Cac170176
Gac>Kac3030
Gac>Sac2020
Gac>Tac11601151
Gag>Aag350196
Gag>Cag9098
Gag>Dag1010
Gag>Rag1010
Gag>Tag10095
Gat>Aat730509
Gat>Cat3603510
Gat>Kat130122
Gat>Rat3030
Gat>Tat190017810
Gca>Aca245021110
Gca>Cca150109
Gca>Kca4040
Gca>Rca100100
Gca>Tca1060669
Gcc>Acc4003010
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160133
Gcg>Acg180139
Gcg>Kcg1011
Gcg>Tcg210213
Gct>Act16508913
Gct>Cct24086
Gct>Kct240221
Gct>Rct8081
Gct>Sct2020
Gct>Tct200015015
Gga>Aga320326
Gga>Cga1647016474
Gga>Rga160161
Gga>Sga100100
Gga>Tga6060
Ggc>Agc350356
Ggc>Cgc3030
Ggc>Kgc1011
Ggc>Rgc2021
Ggc>Sgc1010
Ggc>Tgc390390
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt281024413
Ggt>Cgt4031
Ggt>Kgt7071
Ggt>Rgt100102
Ggt>Tgt660651
Gta>Ata315020211
Gta>Cta6061
Gta>Kta9082
Gta>Rta1010
Gta>Tta304029912
Gtc>Atc720278
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450455
Gtg>Atg5302210
Gtg>Ctg18901891
Gtg>Stg1010
Gtg>Ttg11401148
Gtt>Att327011410
Gtt>Ctt4502011
Gtt>Ktt100102
Gtt>Rtt4041
Gtt>Stt2020
Gtt>Ttt23202297
TAt>GTt7070
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160151
Tac>Cac490396
Tac>Gac2021
Tac>Yac140140
Tat>Aat9096
Tat>Cat190199
Tat>Gat5053
Tat>Kat1010
Tat>Yat3030
Tca>Aca4701410
Tca>Cca640349
Tca>Gca530188
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120119
Tcc>Ccc5052
Tcc>Gcc260129
Tcc>Wcc3031
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420118
Tct>Cct260219
Tct>Gct670189
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1011
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14096
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620168
Tta>Cta60105110
Tta>Gta2401110
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc890796
Ttc>Gtc8086
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370118
Ttg>Ctg567020611
Ttg>Gtg160157
Ttg>Ytg8082
Ttt>Att17096
Ttt>Ctt230020510
Ttt>Gtt270198
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa1901110
aAa>aGa10205511
aAa>aRa1010
aAa>aTa19087
aAa>aWa2021
aAc>aCc210118
aAc>aGc5103010
aAc>aMc2020
aAc>aRc1010
aAc>aTc8085
aAc>aWc3030
aAg>aCg180128
aAg>aGg223020612
aAg>aMg1010
aAg>aRg5050
aAg>aTg18088
aAg>aWg1011
aAt>aCt11605010
aAt>aGt1170739
aAt>aMt2020
aAt>aRt6060
aAt>aTt9085
aAt>aWt4041
aCa>aAa164164146146
aCa>aBa1010
aCa>aGa150109
aCa>aMa3030
aCa>aTa345033315
aCa>aYa210212
aCc>aAc12076
aCc>aGc9088
aCc>aTc26970266311
aCc>aYc6061
aCg>aAg1011
aCg>aGg4043
aCg>aTg27602748
aCg>aYg4040
aCt>aAt720568
aCt>aGt330109
aCt>aSt1010
aCt>aTt691061116
aCt>aYt240242
aGA>aAC2022
aGa>aAa830349
aGa>aCa290249
aGa>aKa4040
aGa>aRa6061
aGa>aSa2021
aGa>aTa460465
aGc>aAc150107
aGc>aCc7075
aGc>aKc1010
aGc>aRc2021
aGc>aSc1010
aGc>aTc190191
aGg>aAg17150170712
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330759
aGt>aCt950418
aGt>aKt110112
aGt>aRt1010
aGt>aSt3503521
aGt>aTt15401499
aTa>aAa3030
aTa>aCa920669
aTa>aGa7066
aTa>aYa2020
aTc>aAc1011
aTc>aCc620619
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210210
aTg>aDg1010
aTg>aGg4043
aTg>aKg2021
aTt>aAt7077
aTt>aCt740449
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310199
aaA>aaG762013511
aaA>aaM1010
aaA>aaR6060
aaA>aaT420188
aaA>aaW2020
aaC>aaA130135
aaC>aaG7076
aaC>aaM2022
aaC>aaT1281071511
aaC>aaY240222
aaG>aaA66104410
aaG>aaC150151
aaG>aaK4040
aaG>aaR3033
aaG>aaT16801516
aaT>aaA610169
aaT>aaC76101589
aaT>aaG160117
aaT>aaK1010
aaT>aaW3031
aaT>aaY9092
acA>acC1270119
acA>acG20501249
acA>acM2020
acA>acR4043
acA>acT5690279
acA>acW1010
acC>acA1170169
acC>acG10055
acC>acM2020
acC>acT379020712
acC>acY130131
acG>acA1470259
acG>acC6063
acG>acK1010
acG>acR3030
acG>acT950629
acT>acA52402011
acT>acC406011610
acT>acG750258
acT>acW2021
acT>acY7070
agA>agC23085
agA>agG19703011
agA>agM1011
agA>agR7072
agA>agT410139
agC>agA5605651
agC>agM4044
agC>agT17970170014
agC>agY2020
agG>agA18410166413
agG>agC1011
agG>agK2021
agG>agR100100
agG>agT290249
agT>agA420118
agT>agC15002810
agT>agG9074
agT>agW1010
agT>agY2021
atA>atC450108
atA>atG180188
atA>atM2020
atA>atR1011
atA>atT3140119
atA>atW1010
atC>atA1080258
atC>atG9055
atC>atM2021
atC>atT589033111
atC>atY4040
atG>atA950929
atG>atC120123
atG>atK9091
atG>atR2020
atG>atT23202149
atT>atA3480139
atT>atC2600349
atT>atG120127
atT>atW210120
atT>atY3030
cAa>cCa460159
cAa>cGa440348
cAa>cMa5050
cAa>cRa1011
cAa>cTa180188
cAa>cWa1010
cAc>cGc3030
cAg>cCg21066
cAg>cGg240196
cAg>cTg130108
cAg>cWg1010
cAt>cCt1010
cAt>cGt560565
cAt>cMt5043
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210138
cCa>cGa2011
cCa>cMa1010
cCa>cSa1010
cCa>cTa16501655
cCa>cYa150150
cCc>cAc1011
cCc>cGc2020
cCc>cTc1820182121
cCc>cYc5052
cCg>cTg7071
cCg>cYg1010
cCt>cAt290125
cCt>cGt5051
cCt>cTt81260805325
cCt>cYt240240
cGa>cTa3030
cGc>cAc200201
cGc>cTc9090
cGg>cAg6062
cGg>cCg3030
cGt>cAt170170
cGt>cKt1010
cGt>cTt240240
cTa>cAa1010
cTa>cCa9098
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320321
cTc>cWc1011
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2021
cTg>cWg1011
cTt>cAt250207
cTt>cCt170154
cTt>cDt1010
cTt>cGt110106
cTt>cWt2020
cTt>cYt9095
caA>caC330199
caA>caG42504511
caA>caM2020
caA>caR5050
caA>caT3701610
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT30909810
caC>caY5051
caG>caA4600529
caG>caC250239
caG>caK110113
caG>caR1010
caG>caT32640321116
caT>caA9063
caT>caC35801529
caT>caG9095
caT>caK1010
caT>caY6060
ccA>ccC570159
ccA>ccG970499
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720319
ccA>ccW2021
ccC>ccA450139
ccC>ccG10098
ccC>ccM1010
ccC>ccT2070859
ccC>ccY3030
ccG>ccA5202311
ccG>ccC100109
ccG>ccK5050
ccG>ccT14901229
ccT>ccA3490189
ccT>ccC1540499
ccT>ccG700199
ccT>ccW3030
ccT>ccY5050
cgA>cgC5053
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130108
cgC>cgT1030399
cgC>cgY1010
cgG>cgA320138
cgG>cgC9098
cgG>cgR1010
cgG>cgT270168
cgT>cgA650108
cgT>cgC444037310
cgT>cgG16065
cgT>cgY4040
ctA>ctC430109
ctA>ctG980139
ctA>ctR1010
ctA>ctT16101710
ctA>ctW3031
ctC>ctA8401210
ctC>ctG580159
ctC>ctM1010
ctC>ctT16560136972
ctC>ctY180184
ctG>ctA1150209
ctG>ctC200109
ctG>ctK2020
ctG>ctT710479
ctT>ctA33102010
ctT>ctC320010310
ctT>ctG1940279
ctT>ctK1010
ctT>ctY3030
gAa>gCa150124
gAa>gGa610545
gAa>gRa2021
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc160128
gAc>gMc2021
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt400158
gAt>gGt69850684818
gAt>gMt1010
gAt>gRt260265
gAt>gTt160155
gAt>gWt2020
gCa>gAa130129
gCa>gGa11066
gCa>gMa1011
gCa>gTa30603026
gCa>gYa160152
gCc>gAc9099
gCc>gGc7076
gCc>gTc840849
gCc>gYc3031
gCg>gAg3033
gCg>gTg220220
gCg>gYg2021
gCt>gAt350207
gCt>gGt690695
gCt>gMt120122
gCt>gSt1010
gCt>gTt8530781134
gCt>gYt240243
gGa>gAa200201
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301521
gGc>gAc18801887
gGc>gCc1010
gGc>gKc3031
gGc>gRc6060
gGc>gTc6061
gGg>gAg9093
gGg>gTg1010
gGt>gAt510309
gGt>gCt8084
gGt>gKt430310
gGt>gRt1010
gGt>gTt94008823
gTa>gAa1010
gTa>gCa5102510
gTa>gGa5055
gTa>gYa2020
gTc>gAc2022
gTc>gCc750709
gTc>gGc4043
gTc>gKc1010
gTc>gYc3030
gTg>gAg4043
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1011
gTt>gAt210107
gTt>gCt8904910
gTt>gGt300208
gTt>gKt4004019
gTt>gWt2020
gTt>gYt2020
gaA>gaC680286
gaA>gaG48506311
gaA>gaM1010
gaA>gaR9091
gaA>gaT1260159
gaA>gaW160140
gaC>gaA950739
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045710
gaC>gaY140142
gaG>gaA42308510
gaG>gaC250128
gaG>gaK7072
gaG>gaS1010
gaG>gaT940789
gaT>gaA29601948
gaT>gaC760017913
gaT>gaG540189
gaT>gaW2020
gaT>gaY100100
gcA>gcC770149
gcA>gcG690269
gcA>gcR1010
gcA>gcT4250669
gcA>gcW110115
gcC>gcA1440229
gcC>gcG150108
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011111
gcC>gcY6060
gcG>gcA1280179
gcG>gcC240198
gcG>gcK1010
gcG>gcR2020
gcG>gcT940549
gcT>gcA4790159
gcT>gcC58802969
gcT>gcG6901410
gcT>gcS1010
gcT>gcW2020
gcT>gcY9092
ggA>ggC200168
ggA>ggG750429
ggA>ggR1011
ggA>ggT32001318
ggC>ggA580189
ggC>ggG7077
ggC>ggT425010310
ggC>ggY2020
ggG>ggA880319
ggG>ggC150108
ggG>ggT2402410
ggT>ggA26601510
ggT>ggC30304210
ggT>ggG460129
ggT>ggW1010
ggT>ggY3031
gtA>gtC760109
gtA>gtG2520729
gtA>gtR3031
gtA>gtT4100159
gtC>gtA1750918
gtC>gtG38098
gtC>gtM1011
gtC>gtT502021714
gtC>gtY7073
gtG>gtA25106914
gtG>gtC1040289
gtG>gtK6061
gtG>gtR3030
gtG>gtT288012913
gtT>gtA39201610
gtT>gtC3530649
gtT>gtG2720179
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc320119
tAc>tWc1011
tAt>tCt1010
tAt>tGt1142011399
tAt>tMt1011
tAt>tRt1010
tAt>tTt260119
tAt>tWt2020
tCa>tGa17077
tCa>tMa1011
tCa>tTa1059010439
tCa>tYa110110
tCc>tAc100108
tCc>tGc6066
tCc>tTc500503
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg390395
tCg>tYg3032
tCt>tAt390395
tCt>tGt100106
tCt>tMt8081
tCt>tTt227022711
tCt>tYt220226
tGc>tAc130135
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280282
tGt>tAt220222
tGt>tCt3021
tGt>tKt5042
tGt>tRt1011
tGt>tTt300305
tTa>tAa9093
tTa>tCa16710166713
tTa>tGa6065
tTa>tWa2021
tTa>tYa9090
tTc>tAc9063
tTc>tCc140149
tTc>tGc160116
tTc>tYc1010
tTg>tAg9099
tTg>tCg5054
tTg>tGg1011
tTg>tWg1010
tTg>tYg1010
tTt>tAt183013810
tTt>tCt4001510
tTt>tGt140147
tTt>tKt2020
tTt>tWt1011
tTt>tYt100104
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657131
taC>taY200201
taG>taT1010
taT>taA4041
taT>taC799020811
taT>taG540540
taT>taK4040
taT>taY3030
tcA>tcC860108
tcA>tcG920359
tcA>tcR3031
tcA>tcT38701910
tcA>tcW1010
tcC>tcA530148
tcC>tcG8086
tcC>tcT340018210
tcC>tcY5050
tcG>tcA280229
tcG>tcC8088
tcG>tcT480329
tcT>tcA41301610
tcT>tcC16603111
tcT>tcG220118
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT331013315
tgC>tgY7070
tgG>tgA2021
tgG>tgC1010
tgG>tgK1010
tgG>tgR2022
tgG>tgT190191
tgT>tgA3030
tgT>tgC35803312
tgT>tgG2020
tgT>tgK3031
tgT>tgY3031
ttA>ttC800118
ttA>ttG951058812
ttA>ttR4040
ttA>ttT29101710
ttA>ttW1010
ttC>ttA2401910
ttC>ttG100108
ttC>ttS2022
ttC>ttT77420706627
ttC>ttY320316
ttG>ttA43406510
ttG>ttC600169
ttG>ttK160162
ttG>ttS1010
ttG>ttT141801287130
ttT>ttA5703613
ttT>ttC6400589
ttT>ttG5053
ttT>ttK5052
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: aCa>aAa