2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set2663
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801410
Aaa>Gaa2901910
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1010
Aac>Cac7071
Aac>Gac4603011
Aac>Mac2021
Aac>Rac1010
Aac>Tac10080
Aac>Wac1011
Aag>Cag290129
Aag>Gag2801610
Aag>Mag4040
Aag>Rag2020
Aag>Tag13085
Aag>Wag1010
Aat>Cat4701610
Aat>Gat11404212
Aat>Mat1010
Aat>Rat5050
Aat>Tat190167
Aat>Wat150150
Aca>Cca7076
Aca>Gca9503416
Aca>Rca2020
Aca>Tca330237
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200108
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1010
Acg>Gcg220148
Acg>Rcg2020
Act>Cct17075
Act>Gct12305116
Act>Mct2020
Act>Rct3031
Act>Tct600168
Act>Wct120120
Aga>Cga9101210
Aga>Gga110118
Aga>Tga2020
Agc>Ggc4003016
Agc>Rgc2021
Agg>Cgg32098
Agg>Ggg3031
Agg>Rgg1011
Agg>Tgg4041
Agt>Cgt7107149
Agt>Ggt10904712
Agt>Mgt360361
Agt>Rgt2020
Agt>Tgt250138
Agt>Wgt1010
Ata>Cta8080
Ata>Gta12405717
Ata>Rta2020
Ata>Tta200155
Atc>Ctc170129
Atc>Gtc6703120
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150158
Atg>Gtg6305129
Atg>Mtg3031
Atg>Rtg3031
Atg>Ttg170129
Atg>Wtg1010
Att>Ctt350149
Att>Gtt50003279
Att>Mtt3030
Att>Rtt6061
Att>Ttt230135
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303610
Caa>Gaa6202415
Caa>Maa2020
Caa>Saa1011
Caa>Taa260208
Caa>Yaa9080
Cac>Aac13087
Cac>Gac1011
Cac>Tac9809722
Cac>Yac5050
Cag>Aag390159
Cag>Gag260128
Cag>Mag3032
Cag>Tag12065
Cag>Yag3030
Cat>Aat17099
Cat>Gat1011
Cat>Mat2020
Cat>Tat171016535
Cat>Yat100100
Cca>Aca250148
Cca>Gca5055
Cca>Mca2022
Cca>Sca1010
Cca>Tca494047661
Cca>Yca7071
Ccc>Acc8083
Ccc>Mcc1010
Ccc>Tcc340345
Ccg>Acg2021
Ccg>Gcg1010
Ccg>Tcg240241
Cct>Act190176
Cct>Gct19099
Cct>Mct5050
Cct>Tct170016148
Cct>Yct6051
Cga>Aga19098
Cga>Yga1010
Cgc>Agc6065
Cgc>Ggc1010
Cgc>Tgc240241
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1010
Cgt>Tgt167016411
Cgt>Ygt4041
Cta>Ata3401611
Cta>Gta2021
Cta>Tta822049869
Cta>Yta5051
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc193011728
Ctc>Ytc6060
Ctg>Atg7071
Ctg>Gtg8081
Ctg>Mtg1010
Ctg>Ttg17208019
Ctg>Ytg1010
Ctt>Att380316
Ctt>Gtt200105
Ctt>Stt3030
Ctt>Ttt6250373121
Ctt>Ytt160162
GAa>CCa3032
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1011
GTt>CAt5050
Gaa>Aaa8405115
Gaa>Caa3302010
Gaa>Kaa3030
Gaa>Raa8082
Gaa>Saa1010
Gaa>Taa1901811
Gac>Aac294028210
Gac>Cac170175
Gac>Kac3031
Gac>Sac2020
Gac>Tac116011561
Gag>Aag350199
Gag>Cag9098
Gag>Dag1011
Gag>Rag1010
Gag>Tag10098
Gat>Aat7305018
Gat>Cat3603514
Gat>Kat130121
Gat>Rat3030
Gat>Tat190017835
Gca>Aca245021115
Gca>Cca150109
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606621
Gcc>Acc4003013
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4042
Gcc>Tcc160136
Gcg>Acg1801310
Gcg>Kcg1010
Gcg>Tcg210214
Gct>Act16508919
Gct>Cct24085
Gct>Kct240220
Gct>Rct8080
Gct>Sct2020
Gct>Tct200015028
Gga>Aga320325
Gga>Cga1647016478
Gga>Rga160164
Gga>Sga100101
Gga>Tga6062
Ggc>Agc3503518
Ggc>Cgc3032
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc3903910
Ggg>Agg8088
Ggg>Tgg1011
Ggt>Agt281024452
Ggt>Cgt4031
Ggt>Kgt7071
Ggt>Rgt100101
Ggt>Tgt6606517
Gta>Ata315020220
Gta>Cta6061
Gta>Kta9080
Gta>Rta1010
Gta>Tta304029937
Gtc>Atc720278
Gtc>Ctc6062
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450457
Gtg>Atg5302211
Gtg>Ctg18901898
Gtg>Stg1010
Gtg>Ttg114011434
Gtt>Att327011422
Gtt>Ctt4502012
Gtt>Ktt100100
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt232022961
TAt>GTt7071
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2022
TTt>CAt2021
TTt>CCt1011
Tac>Aac160158
Tac>Cac4903918
Tac>Gac2020
Tac>Yac140141
Tat>Aat9095
Tat>Cat1901911
Tat>Gat5055
Tat>Kat1011
Tat>Yat3030
Tca>Aca4701412
Tca>Cca6403410
Tca>Gca5301811
Tca>Kca1010
Tca>Wca1010
Tca>Yca4041
Tcc>Acc120118
Tcc>Ccc5054
Tcc>Gcc260128
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420119
Tct>Cct2602110
Tct>Gct6701813
Tct>Wct1011
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6066
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5051
Tgg>Cgg1011
Tgg>Wgg2020
Tgt>Agt14096
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata6201611
Tta>Cta60105115
Tta>Gta240119
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3031
Ttc>Ctc8907967
Ttc>Gtc8085
Ttc>Ktc1011
Ttc>Ytc3033
Ttg>Atg370118
Ttg>Ctg567020619
Ttg>Gtg160157
Ttg>Ytg8080
Ttt>Att17095
Ttt>Ctt230020518
Ttt>Gtt2701913
Ttt>Ktt1010
Ttt>Wtt2022
Ttt>Ytt3030
aAa>aCa190119
aAa>aGa10205519
aAa>aRa1010
aAa>aTa19086
aAa>aWa2020
aAc>aCc210118
aAc>aGc5103023
aAc>aMc2022
aAc>aRc1010
aAc>aTc8086
aAc>aWc3031
aAg>aCg180128
aAg>aGg223020631
aAg>aMg1010
aAg>aRg5050
aAg>aTg18085
aAg>aWg1010
aAt>aCt11605020
aAt>aGt11707320
aAt>aMt2021
aAt>aRt6060
aAt>aTt9086
aAt>aWt4040
aCa>aAa164014611
aCa>aBa1011
aCa>aGa150108
aCa>aMa3030
aCa>aTa345033376
aCa>aYa210211
aCc>aAc12075
aCc>aGc9088
aCc>aTc2697269726632663
aCc>aYc6060
aCg>aAg1011
aCg>aGg4043
aCg>aTg276027413
aCg>aYg4040
aCt>aAt7205614
aCt>aGt330108
aCt>aSt1010
aCt>aTt6910611191
aCt>aYt240240
aGA>aAC2022
aGa>aAa8303424
aGa>aCa2902420
aGa>aKa4040
aGa>aRa6060
aGa>aSa2020
aGa>aTa4604613
aGc>aAc150107
aGc>aCc7075
aGc>aKc1010
aGc>aRc2021
aGc>aSc1010
aGc>aTc1901914
aGg>aAg17150170755
aGg>aCg1010
aGg>aKg2020
aGg>aRg9091
aGg>aTg4042
aGt>aAt13307515
aGt>aCt950419
aGt>aKt110110
aGt>aRt1010
aGt>aSt350350
aGt>aTt154014930
aTa>aAa3030
aTa>aCa9206617
aTa>aGa7065
aTa>aYa2021
aTc>aAc1011
aTc>aCc6206113
aTc>aGc1010
aTc>aYc2020
aTg>aAg4043
aTg>aCg210214
aTg>aDg1011
aTg>aGg4043
aTg>aKg2020
aTt>aAt7076
aTt>aCt7404415
aTt>aGt4041
aTt>aWt1010
aTt>aYt6062
aaA>aaC310198
aaA>aaG762013546
aaA>aaM1010
aaA>aaR6061
aaA>aaT4201812
aaA>aaW2020
aaC>aaA130135
aaC>aaG7076
aaC>aaM2020
aaC>aaT1281071586
aaC>aaY240223
aaG>aaA66104418
aaG>aaC150156
aaG>aaK4040
aaG>aaR3030
aaG>aaT168015141
aaT>aaA610168
aaT>aaC761015820
aaT>aaG160119
aaT>aaK1010
aaT>aaW3030
aaT>aaY9092
acA>acC1270119
acA>acG205012417
acA>acM2020
acA>acR4041
acA>acT56902715
acA>acW1010
acC>acA11701610
acC>acG10055
acC>acM2022
acC>acT379020732
acC>acY130135
acG>acA14702512
acG>acC6064
acG>acK1010
acG>acR3031
acG>acT9506222
acT>acA52402012
acT>acC406011628
acT>acG7502510
acT>acW2020
acT>acY7074
agA>agC23086
agA>agG19703011
agA>agM1010
agA>agR7070
agA>agT410139
agC>agA560562
agC>agM4040
agC>agT17970170030
agC>agY2020
agG>agA18410166420
agG>agC1010
agG>agK2020
agG>agR100101
agG>agT2902413
agT>agA420118
agT>agC15002810
agT>agG9074
agT>agW1010
agT>agY2021
atA>atC450109
atA>atG1801812
atA>atM2020
atA>atR1010
atA>atT3140119
atA>atW1010
atC>atA1080258
atC>atG9055
atC>atM2020
atC>atT589033152
atC>atY4041
atG>atA9509217
atG>atC120126
atG>atK9090
atG>atR2020
atG>atT232021429
atT>atA34801310
atT>atC26003416
atT>atG120128
atT>atW210120
atT>atY3031
cAa>cCa460159
cAa>cGa4403410
cAa>cMa5050
cAa>cRa1010
cAa>cTa1801811
cAa>cWa1011
cAc>cGc3030
cAg>cCg21066
cAg>cGg2401911
cAg>cTg130108
cAg>cWg1010
cAt>cCt1011
cAt>cGt560567
cAt>cMt5040
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210139
cCa>cGa2010
cCa>cMa1011
cCa>cSa1010
cCa>cTa165016532
cCa>cYa150152
cCc>cAc1011
cCc>cGc2020
cCc>cTc18201829
cCc>cYc5051
cCg>cTg7071
cCg>cYg1010
cCt>cAt290125
cCt>cGt5050
cCt>cTt8126080532640
cCt>cYt240244
cGa>cTa3030
cGc>cAc200206
cGc>cTc9092
cGg>cAg6062
cGg>cCg3030
cGt>cAt170175
cGt>cKt1010
cGt>cTt2402411
cTa>cAa1010
cTa>cCa9099
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320322
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2022
cTg>cWg1010
cTt>cAt2502014
cTt>cCt170157
cTt>cDt1011
cTt>cGt110105
cTt>cWt2020
cTt>cYt9090
caA>caC330199
caA>caG42504518
caA>caM2022
caA>caR5050
caA>caT3701614
caA>caW1011
caC>caA1010
caC>caG1010
caC>caT30909824
caC>caY5050
caG>caA46005212
caG>caC250239
caG>caK110111
caG>caR1010
caG>caT3264032112600
caT>caA9063
caT>caC358015214
caT>caG9096
caT>caK1010
caT>caY6061
ccA>ccC5701510
ccA>ccG9704915
ccA>ccM1010
ccA>ccR5050
ccA>ccT37203112
ccA>ccW2020
ccC>ccA450139
ccC>ccG10098
ccC>ccM1011
ccC>ccT20708530
ccC>ccY3030
ccG>ccA5202310
ccG>ccC100108
ccG>ccK5051
ccG>ccT149012216
ccT>ccA34901812
ccT>ccC15404935
ccT>ccG7001914
ccT>ccW3032
ccT>ccY5051
cgA>cgC5053
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130108
cgC>cgT10303918
cgC>cgY1010
cgG>cgA320139
cgG>cgC9098
cgG>cgR1010
cgG>cgT2701611
cgT>cgA650109
cgT>cgC444037334
cgT>cgG16065
cgT>cgY4040
ctA>ctC430109
ctA>ctG980139
ctA>ctR1010
ctA>ctT1610179
ctA>ctW3030
ctC>ctA8401210
ctC>ctG580159
ctC>ctM1010
ctC>ctT16560136948
ctC>ctY180181
ctG>ctA11502012
ctG>ctC200109
ctG>ctK2020
ctG>ctT7104722
ctT>ctA33102011
ctT>ctC320010317
ctT>ctG19402710
ctT>ctK1010
ctT>ctY3030
gAa>gCa150126
gAa>gGa6105430
gAa>gRa2020
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc160129
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120126
gAg>gMg1011
gAg>gTg4042
gAg>gWg1010
gAt>gCt4001512
gAt>gGt6985068482630
gAt>gMt1011
gAt>gRt260261
gAt>gTt160158
gAt>gWt2020
gCa>gAa130129
gCa>gGa11065
gCa>gMa1010
gCa>gTa3060302178
gCa>gYa160153
gCc>gAc9098
gCc>gGc7075
gCc>gTc8408434
gCc>gYc3030
gCg>gAg3033
gCg>gTg220225
gCg>gYg2020
gCt>gAt3502012
gCt>gGt690695
gCt>gMt120121
gCt>gSt1010
gCt>gTt8530781190
gCt>gYt240244
gGa>gAa200202
gGa>gKa140144
gGa>gRa1010
gGa>gSa1010
gGa>gTa153015215
gGc>gAc188018813
gGc>gCc1011
gGc>gKc3030
gGc>gRc6060
gGc>gTc6061
gGg>gAg9093
gGg>gTg1010
gGt>gAt5103010
gGt>gCt8084
gGt>gKt430317
gGt>gRt1011
gGt>gTt940088248
gTa>gAa1010
gTa>gCa510259
gTa>gGa5055
gTa>gYa2020
gTc>gAc2020
gTc>gCc7507067
gTc>gGc4043
gTc>gKc1010
gTc>gYc3031
gTg>gAg4043
gTg>gCg160117
gTg>gGg5055
gTg>gKg1011
gTg>gYg1010
gTt>gAt210107
gTt>gCt8904912
gTt>gGt300208
gTt>gKt400402
gTt>gWt2020
gTt>gYt2020
gaA>gaC680288
gaA>gaG48506319
gaA>gaM1011
gaA>gaR9090
gaA>gaT1260159
gaA>gaW160140
gaC>gaA950739
gaC>gaG5055
gaC>gaM2020
gaC>gaT9520457101
gaC>gaY140142
gaG>gaA42308516
gaG>gaC2501210
gaG>gaK7073
gaG>gaS1010
gaG>gaT9407822
gaT>gaA296019419
gaT>gaC760017945
gaT>gaG540188
gaT>gaW2021
gaT>gaY100103
gcA>gcC770149
gcA>gcG6902614
gcA>gcR1010
gcA>gcT42506610
gcA>gcW110111
gcC>gcA14402210
gcC>gcG150109
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011132
gcC>gcY6061
gcG>gcA12801712
gcG>gcC240198
gcG>gcK1010
gcG>gcR2020
gcG>gcT9405417
gcT>gcA47901511
gcT>gcC588029650
gcT>gcG690149
gcT>gcS1010
gcT>gcW2021
gcT>gcY9093
ggA>ggC200168
ggA>ggG7504212
ggA>ggR1010
ggA>ggT32001318
ggC>ggA5801814
ggC>ggG7077
ggC>ggT425010331
ggC>ggY2020
ggG>ggA8803117
ggG>ggC150108
ggG>ggT2402410
ggT>ggA26601512
ggT>ggC30304215
ggT>ggG460129
ggT>ggW1010
ggT>ggY3030
gtA>gtC760109
gtA>gtG25207220
gtA>gtR3030
gtA>gtT4100159
gtC>gtA17509189
gtC>gtG38098
gtC>gtM1010
gtC>gtT502021752
gtC>gtY7072
gtG>gtA25106943
gtG>gtC1040289
gtG>gtK6061
gtG>gtR3030
gtG>gtT288012946
gtT>gtA3920169
gtT>gtC35306414
gtT>gtG2720179
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210212
tAc>tTc320119
tAc>tWc1010
tAt>tCt1010
tAt>tGt11420113913
tAt>tMt1010
tAt>tRt1010
tAt>tTt260119
tAt>tWt2020
tCa>tGa17076
tCa>tMa1010
tCa>tTa105901043506
tCa>tYa110112
tCc>tAc100108
tCc>tGc6065
tCc>tTc500502
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg3903916
tCg>tYg3030
tCt>tAt3903936
tCt>tGt100105
tCt>tMt8081
tCt>tTt227022754
tCt>tYt220222
tGc>tAc130136
tGc>tTc10095
tGg>tCg2020
tGg>tKg2021
tGg>tTg280285
tGt>tAt220224
tGt>tCt3020
tGt>tKt5040
tGt>tRt1010
tGt>tTt3003013
tTa>tAa9097
tTa>tCa16710166724
tTa>tGa6065
tTa>tWa2020
tTa>tYa9091
tTc>tAc9063
tTc>tCc1401410
tTc>tGc160117
tTc>tYc1010
tTg>tAg9098
tTg>tCg5055
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt183013810
tTt>tCt400159
tTt>tGt140148
tTt>tKt2022
tTt>tWt1010
tTt>tYt100100
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657124
taC>taY200203
taG>taT1010
taT>taA4040
taT>taC799020825
taT>taG540543
taT>taK4041
taT>taY3031
tcA>tcC860108
tcA>tcG9203511
tcA>tcR3031
tcA>tcT38701912
tcA>tcW1010
tcC>tcA5301411
tcC>tcG8087
tcC>tcT340018234
tcC>tcY5051
tcG>tcA2802214
tcG>tcC8088
tcG>tcT4803211
tcT>tcA4130169
tcT>tcC16603114
tcT>tcG220118
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT331013348
tgC>tgY7071
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190195
tgT>tgA3030
tgT>tgC35803311
tgT>tgG2020
tgT>tgK3030
tgT>tgY3031
ttA>ttC800119
ttA>ttG951058826
ttA>ttR4040
ttA>ttT2910179
ttA>ttW1010
ttC>ttA240198
ttC>ttG100108
ttC>ttS2020
ttC>ttT7742070662606
ttC>ttY320316
ttG>ttA43406522
ttG>ttC6001610
ttG>ttK160163
ttG>ttS1010
ttG>ttT14180128770
ttT>ttA570369
ttT>ttC64005823
ttT>ttG5053
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: aCc>aTc