2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set6
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa280144
Aaa>Gaa290190
Aaa>Maa2020
Aaa>Taa14070
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460304
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290125
Aag>Gag280162
Aag>Mag4041
Aag>Rag2020
Aag>Tag13080
Aag>Wag1010
Aat>Cat470164
Aat>Gat1140424
Aat>Mat1010
Aat>Rat5050
Aat>Tat190163
Aat>Wat150151
Aca>Cca7073
Aca>Gca950344
Aca>Rca2020
Aca>Tca330230
Aca>Wca1010
Acc>Ccc1010
Acc>Gcc200103
Acc>Rcc1010
Acc>Tcc9083
Acc>Wcc1011
Acg>Gcg220144
Acg>Rcg2020
Act>Cct17070
Act>Gct1230514
Act>Mct2020
Act>Rct3030
Act>Tct600164
Act>Wct120120
Aga>Cga910124
Aga>Gga110113
Aga>Tga2020
Agc>Ggc400304
Agc>Rgc2020
Agg>Cgg32094
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710712
Agt>Ggt1090474
Agt>Mgt360360
Agt>Rgt2020
Agt>Tgt250133
Agt>Wgt1010
Ata>Cta8080
Ata>Gta1240574
Ata>Rta2020
Ata>Tta200150
Atc>Ctc170124
Atc>Gtc670313
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150153
Atg>Gtg630510
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170122
Atg>Wtg1010
Att>Ctt350144
Att>Gtt50003274
Att>Mtt3031
Att>Rtt6060
Att>Ttt230130
CAT>TTG3033
CAa>ACa1011
CCa>AAa5050
CTt>GGt1010
Caa>Aaa630364
Caa>Gaa620243
Caa>Maa2020
Caa>Saa1010
Caa>Taa260200
Caa>Yaa9081
Cac>Aac13081
Cac>Gac1010
Cac>Tac980973
Cac>Yac5050
Cag>Aag390153
Cag>Gag260124
Cag>Mag3030
Cag>Tag12060
Cag>Yag3030
Cat>Aat17093
Cat>Gat1010
Cat>Mat2020
Cat>Tat17101650
Cat>Yat100100
Cca>Aca250144
Cca>Gca5053
Cca>Mca2020
Cca>Sca1010
Cca>Tca49404764
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340343
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240240
Cct>Act190173
Cct>Gct19093
Cct>Mct5050
Cct>Tct17001613
Cct>Yct6050
Cga>Aga19094
Cga>Yga1010
Cgc>Agc6062
Cgc>Ggc1010
Cgc>Tgc240240
Cgc>Ygc4040
Cgg>Agg20050
Cgg>Tgg5050
Cgt>Agt62083
Cgt>Ggt1010
Cgt>Tgt16701640
Cgt>Ygt4040
Cta>Ata340163
Cta>Gta2022
Cta>Tta82204984
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc19301173
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg1720804
Ctg>Ytg1010
Ctt>Att380313
Ctt>Gtt200100
Ctt>Stt3031
Ctt>Ttt62503734
Ctt>Ytt160160
GAa>CCa3033
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa840514
Gaa>Caa330203
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190184
Gac>Aac29402822
Gac>Cac170171
Gac>Kac3031
Gac>Sac2020
Gac>Tac11601151
Gag>Aag350191
Gag>Cag9093
Gag>Dag1010
Gag>Rag1010
Gag>Tag10090
Gat>Aat730503
Gat>Cat360353
Gat>Kat130120
Gat>Rat3030
Gat>Tat19001781
Gca>Aca24502114
Gca>Cca150104
Gca>Kca4040
Gca>Rca100100
Gca>Tca1060665
Gcc>Acc400303
Gcc>Ccc10050
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160134
Gcg>Acg180134
Gcg>Kcg1010
Gcg>Tcg210213
Gct>Act1650894
Gct>Cct24081
Gct>Kct240220
Gct>Rct8080
Gct>Sct2020
Gct>Tct20001505
Gga>Aga320320
Gga>Cga1647016470
Gga>Rga160160
Gga>Sga100100
Gga>Tga6060
Ggc>Agc350351
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390390
Ggg>Agg8083
Ggg>Tgg1010
Ggt>Agt28102443
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660651
Gta>Ata31502024
Gta>Cta6060
Gta>Kta9081
Gta>Rta1010
Gta>Tta30402993
Gtc>Atc720274
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450454
Gtg>Atg530224
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg11401143
Gtt>Att32701144
Gtt>Ctt450204
Gtt>Ktt100100
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt23202290
TAt>GTt7070
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160150
Tac>Cac490390
Tac>Gac2020
Tac>Yac140140
Tat>Aat9090
Tat>Cat190194
Tat>Gat5053
Tat>Kat1010
Tat>Yat3030
Tca>Aca470144
Tca>Cca640344
Tca>Gca530184
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120114
Tcc>Ccc5051
Tcc>Gcc260124
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13083
Tcg>Gcg10050
Tct>Act420114
Tct>Cct260214
Tct>Gct670184
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5050
Tgc>Ggc6060
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14090
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620164
Tta>Cta6010514
Tta>Gta240113
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc890790
Ttc>Gtc8080
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370114
Ttg>Ctg56702064
Ttg>Gtg160152
Ttg>Ytg8081
Ttt>Att17090
Ttt>Ctt23002054
Ttt>Gtt270194
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190113
aAa>aGa1020554
aAa>aRa1010
aAa>aTa19080
aAa>aWa2020
aAc>aCc210112
aAc>aGc510304
aAc>aMc2020
aAc>aRc1010
aAc>aTc8080
aAc>aWc3030
aAg>aCg180123
aAg>aGg22302064
aAg>aMg1010
aAg>aRg5050
aAg>aTg18080
aAg>aWg1010
aAt>aCt1160504
aAt>aGt1170735
aAt>aMt2020
aAt>aRt6060
aAt>aTt9080
aAt>aWt4040
aCa>aAa16401463
aCa>aBa1010
aCa>aGa150103
aCa>aMa3030
aCa>aTa34503333
aCa>aYa210211
aCc>aAc12070
aCc>aGc9083
aCc>aTc2697026634
aCc>aYc6060
aCg>aAg1010
aCg>aGg4044
aCg>aTg27602744
aCg>aYg4040
aCt>aAt720564
aCt>aGt330103
aCt>aSt1010
aCt>aTt69106114
aCt>aYt240240
aGA>aAC2022
aGa>aAa830345
aGa>aCa290244
aGa>aKa4040
aGa>aRa6060
aGa>aSa2020
aGa>aTa460460
aGc>aAc150100
aGc>aCc7070
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190190
aGg>aAg1715017073
aGg>aCg1011
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330755
aGt>aCt950414
aGt>aKt110110
aGt>aRt1010
aGt>aSt350350
aGt>aTt15401495
aTa>aAa3030
aTa>aCa920664
aTa>aGa7060
aTa>aYa2020
aTc>aAc1011
aTc>aCc620614
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210210
aTg>aDg1010
aTg>aGg4043
aTg>aKg2020
aTt>aAt7071
aTt>aCt740444
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310193
aaA>aaG76201354
aaA>aaM1010
aaA>aaR6060
aaA>aaT420183
aaA>aaW2021
aaC>aaA130130
aaC>aaG7070
aaC>aaM2020
aaC>aaT128107154
aaC>aaY240220
aaG>aaA6610444
aaG>aaC150151
aaG>aaK4040
aaG>aaR3030
aaG>aaT16801512
aaT>aaA610164
aaT>aaC76101584
aaT>aaG160111
aaT>aaK1011
aaT>aaW3030
aaT>aaY9090
acA>acC1270114
acA>acG20501244
acA>acM2020
acA>acR4040
acA>acT5690274
acA>acW1010
acC>acA1170164
acC>acG10050
acC>acM2020
acC>acT37902074
acC>acY130130
acG>acA1470254
acG>acC6666
acG>acK1010
acG>acR3030
acG>acT950624
acT>acA5240204
acT>acC40601164
acT>acG750254
acT>acW2020
acT>acY7070
agA>agC23080
agA>agG1970304
agA>agM1010
agA>agR7071
agA>agT410134
agC>agA560560
agC>agM4040
agC>agT1797017005
agC>agY2020
agG>agA1841016644
agG>agC1010
agG>agK2020
agG>agR100100
agG>agT290243
agT>agA420114
agT>agC1500284
agT>agG9073
agT>agW1010
agT>agY2020
atA>atC450104
atA>atG180183
atA>atM2020
atA>atR1010
atA>atT3140114
atA>atW1010
atC>atA1080254
atC>atG9050
atC>atM2020
atC>atT58903314
atC>atY4040
atG>atA950923
atG>atC120123
atG>atK9090
atG>atR2020
atG>atT23202141
atT>atA3480134
atT>atC2600344
atT>atG120122
atT>atW210120
atT>atY3030
cAa>cCa460154
cAa>cGa440343
cAa>cMa5050
cAa>cRa1010
cAa>cTa180181
cAa>cWa1010
cAc>cGc3030
cAg>cCg21060
cAg>cGg240190
cAg>cTg130103
cAg>cWg1011
cAt>cCt1010
cAt>cGt560560
cAt>cMt5040
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210134
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa16501650
cCa>cYa150150
cCc>cAc1010
cCc>cGc2020
cCc>cTc18201820
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290120
cCt>cGt5051
cCt>cTt8126080534
cCt>cYt240240
cGa>cTa3030
cGc>cAc200200
cGc>cTc9090
cGg>cAg6060
cGg>cCg3031
cGt>cAt170170
cGt>cKt1010
cGt>cTt240240
cTa>cAa1010
cTa>cCa9093
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320320
cTc>cWc1010
cTc>cYc1010
cTg>cAg5050
cTg>cCg2020
cTg>cGg2020
cTg>cWg1010
cTt>cAt250200
cTt>cCt170153
cTt>cDt1010
cTt>cGt110100
cTt>cWt2020
cTt>cYt9090
caA>caC330194
caA>caG4250454
caA>caM2020
caA>caR5050
caA>caT370163
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT3090984
caC>caY5050
caG>caA4600524
caG>caC250234
caG>caK110110
caG>caR1010
caG>caT3264032111
caT>caA9064
caT>caC35801524
caT>caG9090
caT>caK1010
caT>caY6060
ccA>ccC570154
ccA>ccG970494
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720314
ccA>ccW2020
ccC>ccA450134
ccC>ccG10094
ccC>ccM1010
ccC>ccT2070854
ccC>ccY3030
ccG>ccA520234
ccG>ccC100104
ccG>ccK5050
ccG>ccT14901224
ccT>ccA3490184
ccT>ccC1540494
ccT>ccG700195
ccT>ccW3030
ccT>ccY5050
cgA>cgC5053
cgA>cgG6060
cgA>cgR1010
cgA>cgT26060
cgC>cgA130104
cgC>cgT1030394
cgC>cgY1010
cgG>cgA320134
cgG>cgC9094
cgG>cgR1010
cgG>cgT270164
cgT>cgA650104
cgT>cgC44403734
cgT>cgG16060
cgT>cgY4040
ctA>ctC430104
ctA>ctG980134
ctA>ctR1010
ctA>ctT1610174
ctA>ctW3030
ctC>ctA840124
ctC>ctG580153
ctC>ctM1010
ctC>ctT1656013694
ctC>ctY180180
ctG>ctA1150204
ctG>ctC200104
ctG>ctK2020
ctG>ctT710474
ctT>ctA3310204
ctT>ctC32001034
ctT>ctG1940274
ctT>ctK1010
ctT>ctY3030
gAa>gCa150123
gAa>gGa610540
gAa>gRa2020
gAa>gTa19092
gAa>gWa1010
gAc>gCc130130
gAc>gGc160124
gAc>gMc2020
gAc>gRc1010
gAc>gTc3030
gAg>gCg16060
gAg>gGg120120
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt400153
gAt>gGt6985068485
gAt>gMt1010
gAt>gRt260260
gAt>gTt160152
gAt>gWt2020
gCa>gAa130124
gCa>gGa11060
gCa>gMa1010
gCa>gTa30603021
gCa>gYa160150
gCc>gAc9093
gCc>gGc7070
gCc>gTc840840
gCc>gYc3030
gCg>gAg3033
gCg>gTg220220
gCg>gYg2020
gCt>gAt350200
gCt>gGt690690
gCt>gMt120120
gCt>gSt1010
gCt>gTt85307814
gCt>gYt240240
gGa>gAa200200
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301521
gGc>gAc18801880
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6060
gGg>gAg9093
gGg>gTg1011
gGt>gAt510303
gGt>gCt8083
gGt>gKt430310
gGt>gRt1010
gGt>gTt94008821
gTa>gAa1010
gTa>gCa510254
gTa>gGa5050
gTa>gYa2020
gTc>gAc2020
gTc>gCc750704
gTc>gGc4044
gTc>gKc1010
gTc>gYc3030
gTg>gAg4043
gTg>gCg160112
gTg>gGg5050
gTg>gKg1010
gTg>gYg1010
gTt>gAt210101
gTt>gCt890494
gTt>gGt300203
gTt>gKt400400
gTt>gWt2021
gTt>gYt2020
gaA>gaC680281
gaA>gaG4850634
gaA>gaM1010
gaA>gaR9091
gaA>gaT1260154
gaA>gaW160140
gaC>gaA950734
gaC>gaG5050
gaC>gaM2020
gaC>gaT95204574
gaC>gaY140140
gaG>gaA4230854
gaG>gaC250125
gaG>gaK7070
gaG>gaS1010
gaG>gaT940785
gaT>gaA29601944
gaT>gaC76001794
gaT>gaG540184
gaT>gaW2020
gaT>gaY100101
gcA>gcC770144
gcA>gcG690264
gcA>gcR1010
gcA>gcT4250664
gcA>gcW110110
gcC>gcA1440224
gcC>gcG150104
gcC>gcM2020
gcC>gcS1010
gcC>gcT41501114
gcC>gcY6060
gcG>gcA1280174
gcG>gcC240194
gcG>gcK1010
gcG>gcR2020
gcG>gcT940544
gcT>gcA4790154
gcT>gcC58802964
gcT>gcG690144
gcT>gcS1011
gcT>gcW2020
gcT>gcY9090
ggA>ggC200164
ggA>ggG750424
ggA>ggR1010
ggA>ggT32001314
ggC>ggA580184
ggC>ggG7072
ggC>ggT42501034
ggC>ggY2021
ggG>ggA880314
ggG>ggC150104
ggG>ggT240244
ggT>ggA2660154
ggT>ggC3030424
ggT>ggG460124
ggT>ggW1010
ggT>ggY3030
gtA>gtC760104
gtA>gtG2520724
gtA>gtR3030
gtA>gtT4100154
gtC>gtA1750914
gtC>gtG38093
gtC>gtM1010
gtC>gtT50202174
gtC>gtY7070
gtG>gtA2510694
gtG>gtC1040284
gtG>gtK6060
gtG>gtR3030
gtG>gtT28801294
gtT>gtA3920164
gtT>gtC3530644
gtT>gtG2720174
gtT>gtK1010
gtT>gtY2020
tAc>tCc5050
tAc>tGc210210
tAc>tTc320114
tAc>tWc1010
tAt>tCt1010
tAt>tGt1142011390
tAt>tMt1010
tAt>tRt1010
tAt>tTt260113
tAt>tWt2020
tCa>tGa17070
tCa>tMa1010
tCa>tTa1059010433
tCa>tYa110110
tCc>tAc100104
tCc>tGc6060
tCc>tTc500500
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg390390
tCg>tYg3030
tCt>tAt390391
tCt>tGt100100
tCt>tMt8080
tCt>tTt22702274
tCt>tYt220221
tGc>tAc130130
tGc>tTc10090
tGg>tCg2020
tGg>tKg2020
tGg>tTg280280
tGt>tAt220222
tGt>tCt3020
tGt>tKt5041
tGt>tRt1010
tGt>tTt300301
tTa>tAa9093
tTa>tCa1671016676
tTa>tGa6060
tTa>tWa2020
tTa>tYa9091
tTc>tAc9064
tTc>tCc140143
tTc>tGc160110
tTc>tYc1010
tTg>tAg9093
tTg>tCg5053
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt18301384
tTt>tCt400154
tTt>tGt140142
tTt>tKt2020
tTt>tWt1010
tTt>tYt100101
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT2256016574
taC>taY200200
taG>taT1010
taT>taA4040
taT>taC79902084
taT>taG540540
taT>taK4040
taT>taY3030
tcA>tcC860104
tcA>tcG920354
tcA>tcR3030
tcA>tcT3870194
tcA>tcW1010
tcC>tcA530143
tcC>tcG8080
tcC>tcT34001824
tcC>tcY5050
tcG>tcA280224
tcG>tcC8083
tcG>tcT480324
tcT>tcA4130164
tcT>tcC1660314
tcT>tcG220114
tcT>tcY2020
tgA>tgG2021
tgC>tgA1010
tgC>tgT33101334
tgC>tgY7070
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190190
tgT>tgA3030
tgT>tgC3580334
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800114
ttA>ttG95105884
ttA>ttR4040
ttA>ttT2910174
ttA>ttW1010
ttC>ttA240193
ttC>ttG100103
ttC>ttS2020
ttC>ttT7742070665
ttC>ttY320310
ttG>ttA4340654
ttG>ttC600164
ttG>ttK160160
ttG>ttS1011
ttG>ttT1418012875
ttT>ttA570364
ttT>ttC6400584
ttT>ttG5053
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: acG>acC