2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set1700
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801410
Aaa>Gaa290199
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1010
Aac>Cac7070
Aac>Gac4603012
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag2901210
Aag>Gag280167
Aag>Mag4041
Aag>Rag2020
Aag>Tag13087
Aag>Wag1010
Aat>Cat4701610
Aat>Gat11404212
Aat>Mat1010
Aat>Rat5050
Aat>Tat190164
Aat>Wat150151
Aca>Cca7076
Aca>Gca9503417
Aca>Rca2020
Aca>Tca330236
Aca>Wca1011
Acc>Ccc1011
Acc>Gcc200108
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1011
Acg>Gcg2201410
Acg>Rcg2020
Act>Cct17075
Act>Gct12305119
Act>Mct2020
Act>Rct3030
Act>Tct6001610
Act>Wct120120
Aga>Cga9101210
Aga>Gga110119
Aga>Tga2020
Agc>Ggc4003018
Agc>Rgc2020
Agg>Cgg32099
Agg>Ggg3031
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710712
Agt>Ggt10904713
Agt>Mgt360360
Agt>Rgt2020
Agt>Tgt250138
Agt>Wgt1010
Ata>Cta8086
Ata>Gta12405710
Ata>Rta2021
Ata>Tta200157
Atc>Ctc1701210
Atc>Gtc6703116
Atc>Mtc1010
Atc>Ttc3031
Atg>Ctg150158
Atg>Gtg6305112
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170129
Atg>Wtg1010
Att>Ctt3501410
Att>Gtt500032726
Att>Mtt3031
Att>Rtt6060
Att>Ttt230137
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1011
Caa>Aaa6303613
Caa>Gaa6202410
Caa>Maa2021
Caa>Saa1010
Caa>Taa260208
Caa>Yaa9081
Cac>Aac13087
Cac>Gac1010
Cac>Tac9809717
Cac>Yac5050
Cag>Aag3901512
Cag>Gag260129
Cag>Mag3030
Cag>Tag12065
Cag>Yag3030
Cat>Aat17099
Cat>Gat1010
Cat>Mat2021
Cat>Tat171016536
Cat>Yat100100
Cca>Aca2501411
Cca>Gca5053
Cca>Mca2020
Cca>Sca1010
Cca>Tca494047622
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340347
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240241
Cct>Act190177
Cct>Gct19098
Cct>Mct5050
Cct>Tct170016128
Cct>Yct6050
Cga>Aga19099
Cga>Yga1010
Cgc>Agc6062
Cgc>Ggc1010
Cgc>Tgc240241
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5053
Cgt>Agt62088
Cgt>Ggt1010
Cgt>Tgt167016411
Cgt>Ygt4041
Cta>Ata340169
Cta>Gta2022
Cta>Tta822049845
Cta>Yta5051
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc193011710
Ctc>Ytc6062
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg17208040
Ctg>Ytg1010
Ctt>Att3803117
Ctt>Gtt200105
Ctt>Stt3031
Ctt>Ttt625037351
Ctt>Ytt160160
GAa>CCa3033
GCt>AGt2020
GGa>TTa2022
GGt>TTt2020
GTg>CAg1010
GTt>CAt5051
Gaa>Aaa8405115
Gaa>Caa330209
Gaa>Kaa3031
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa1901810
Gac>Aac294028222
Gac>Cac170177
Gac>Kac3031
Gac>Sac2022
Gac>Tac11601154
Gag>Aag3501915
Gag>Cag9098
Gag>Dag1010
Gag>Rag1010
Gag>Tag10096
Gat>Aat7305010
Gat>Cat3603510
Gat>Kat130122
Gat>Rat3030
Gat>Tat190017821
Gca>Aca245021136
Gca>Cca1501010
Gca>Kca4041
Gca>Rca100100
Gca>Tca10606625
Gcc>Acc4003015
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160134
Gcg>Acg1801311
Gcg>Kcg1010
Gcg>Tcg210214
Gct>Act16508920
Gct>Cct24087
Gct>Kct240220
Gct>Rct8080
Gct>Sct2020
Gct>Tct200015023
Gga>Aga3203210
Gga>Cga1647016473
Gga>Rga160162
Gga>Sga100100
Gga>Tga6061
Ggc>Agc3503511
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1011
Ggc>Tgc390399
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt281024426
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660659
Gta>Ata315020217
Gta>Cta6061
Gta>Kta9081
Gta>Rta1010
Gta>Tta3040299109
Gtc>Atc7202711
Gtc>Ctc6061
Gtc>Ktc1010
Gtc>Rtc2021
Gtc>Stc2020
Gtc>Ttc4504511
Gtg>Atg5302214
Gtg>Ctg1890189186
Gtg>Stg1010
Gtg>Ttg114011410
Gtt>Att327011448
Gtt>Ctt4502010
Gtt>Ktt100101
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt232022936
TAt>GTt7071
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160153
Tac>Cac490397
Tac>Gac2020
Tac>Yac140140
Tat>Aat9096
Tat>Cat1901910
Tat>Gat5053
Tat>Kat1010
Tat>Yat3030
Tca>Aca4701410
Tca>Cca6403415
Tca>Gca530189
Tca>Kca1011
Tca>Wca1010
Tca>Yca4041
Tcc>Acc120119
Tcc>Ccc5053
Tcc>Gcc260129
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420119
Tct>Cct2602111
Tct>Gct6701813
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5051
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14095
Tgt>Cgt1011
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata6201610
Tta>Cta60105111
Tta>Gta240118
Tta>Kta1010
Tta>Yta5051
Ttc>Atc3031
Ttc>Ctc890797
Ttc>Gtc8085
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370119
Ttg>Ctg567020611
Ttg>Gtg160158
Ttg>Ytg8081
Ttt>Att17096
Ttt>Ctt2300205189
Ttt>Gtt2701910
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3031
aAa>aCa1901110
aAa>aGa10205519
aAa>aRa1010
aAa>aTa19085
aAa>aWa2020
aAc>aCc210119
aAc>aGc5103011
aAc>aMc2020
aAc>aRc1010
aAc>aTc8085
aAc>aWc3030
aAg>aCg180128
aAg>aGg223020655
aAg>aMg1010
aAg>aRg5050
aAg>aTg18085
aAg>aWg1010
aAt>aCt11605012
aAt>aGt11707315
aAt>aMt2020
aAt>aRt6061
aAt>aTt9085
aAt>aWt4040
aCa>aAa164014614
aCa>aBa1010
aCa>aGa150108
aCa>aMa3030
aCa>aTa345033329
aCa>aYa210215
aCc>aAc12075
aCc>aGc9088
aCc>aTc26970266330
aCc>aYc6061
aCg>aAg1011
aCg>aGg4044
aCg>aTg276027412
aCg>aYg4040
aCt>aAt7205610
aCt>aGt330108
aCt>aSt1010
aCt>aTt6910611126
aCt>aYt240242
aGA>aAC2022
aGa>aAa8303412
aGa>aCa2902412
aGa>aKa4040
aGa>aRa6062
aGa>aSa2020
aGa>aTa460466
aGc>aAc150107
aGc>aCc7077
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190190
aGg>aAg17150170711
aGg>aCg1011
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt13307566
aGt>aCt9504112
aGt>aKt110112
aGt>aRt1010
aGt>aSt350350
aGt>aTt154014917
aTa>aAa3030
aTa>aCa9206624
aTa>aGa7065
aTa>aYa2020
aTc>aAc1011
aTc>aCc6206112
aTc>aGc1010
aTc>aYc2020
aTg>aAg4041
aTg>aCg210211
aTg>aDg1010
aTg>aGg4043
aTg>aKg2020
aTt>aAt7076
aTt>aCt7404415
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310198
aaA>aaG762013537
aaA>aaM1011
aaA>aaR6060
aaA>aaT420188
aaA>aaW2021
aaC>aaA130135
aaC>aaG7076
aaC>aaM2020
aaC>aaT12810715228
aaC>aaY240222
aaG>aaA66104417
aaG>aaC150151
aaG>aaK4040
aaG>aaR3030
aaG>aaT168015128
aaT>aaA6101610
aaT>aaC761015817
aaT>aaG160116
aaT>aaK1011
aaT>aaW3030
aaT>aaY9090
acA>acC12701110
acA>acG205012414
acA>acM2020
acA>acR4040
acA>acT56902716
acA>acW1010
acC>acA11701610
acC>acG10055
acC>acM2020
acC>acT379020727
acC>acY130130
acG>acA14702518
acG>acC6065
acG>acK1010
acG>acR3030
acG>acT9506219
acT>acA52402010
acT>acC406011640
acT>acG7502510
acT>acW2020
acT>acY7070
agA>agC23085
agA>agG19703011
agA>agM1010
agA>agR7072
agA>agT4101311
agC>agA560561
agC>agM4040
agC>agT1797179717001700
agC>agY2020
agG>agA18410166413
agG>agC1010
agG>agK2020
agG>agR100100
agG>agT290249
agT>agA420119
agT>agC15002810
agT>agG9074
agT>agW1010
agT>agY2020
atA>atC450109
atA>atG1801812
atA>atM2020
atA>atR1010
atA>atT31401110
atA>atW1010
atC>atA10802511
atC>atG9055
atC>atM2020
atC>atT5890331126
atC>atY4040
atG>atA9509271
atG>atC120125
atG>atK9090
atG>atR2020
atG>atT232021417
atT>atA34801310
atT>atC26003411
atT>atG120128
atT>atW210120
atT>atY3030
cAa>cCa460159
cAa>cGa4403414
cAa>cMa5051
cAa>cRa1010
cAa>cTa180187
cAa>cWa1010
cAc>cGc3030
cAg>cCg21066
cAg>cGg240198
cAg>cTg130109
cAg>cWg1011
cAt>cCt1010
cAt>cGt560569
cAt>cMt5041
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa2101310
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa165016524
cCa>cYa150152
cCc>cAc1011
cCc>cGc2020
cCc>cTc182018236
cCc>cYc5050
cCg>cTg7071
cCg>cYg1010
cCt>cAt290125
cCt>cGt5051
cCt>cTt8126080531268
cCt>cYt240243
cGa>cTa3030
cGc>cAc200204
cGc>cTc9090
cGg>cAg6062
cGg>cCg3031
cGt>cAt170170
cGt>cKt1010
cGt>cTt240242
cTa>cAa1010
cTa>cCa9098
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320326
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2021
cTg>cWg1010
cTt>cAt250207
cTt>cCt170157
cTt>cDt1010
cTt>cGt110107
cTt>cWt2020
cTt>cYt9090
caA>caC3301910
caA>caG42504510
caA>caM2020
caA>caR5050
caA>caT370169
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT30909818
caC>caY5050
caG>caA46005225
caG>caC250239
caG>caK110110
caG>caR1010
caG>caT32640321128
caT>caA9065
caT>caC358015217
caT>caG9097
caT>caK1011
caT>caY6060
ccA>ccC5701510
ccA>ccG9704919
ccA>ccM1010
ccA>ccR5050
ccA>ccT37203111
ccA>ccW2020
ccC>ccA4501310
ccC>ccG10099
ccC>ccM1010
ccC>ccT20708513
ccC>ccY3030
ccG>ccA5202311
ccG>ccC100109
ccG>ccK5052
ccG>ccT149012246
ccT>ccA34901811
ccT>ccC15404911
ccT>ccG7001913
ccT>ccW3030
ccT>ccY5050
cgA>cgC5053
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130109
cgC>cgT10303914
cgC>cgY1010
cgG>cgA320139
cgG>cgC9099
cgG>cgR1010
cgG>cgT270169
cgT>cgA650109
cgT>cgC444037316
cgT>cgG16065
cgT>cgY4040
ctA>ctC4301010
ctA>ctG9801311
ctA>ctR1010
ctA>ctT16101710
ctA>ctW3030
ctC>ctA8401210
ctC>ctG580159
ctC>ctM1010
ctC>ctT1656013691089
ctC>ctY180182
ctG>ctA11502013
ctG>ctC2001010
ctG>ctK2020
ctG>ctT7104712
ctT>ctA33102014
ctT>ctC320010349
ctT>ctG19402724
ctT>ctK1010
ctT>ctY3030
gAa>gCa150125
gAa>gGa610548
gAa>gRa2020
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc1601210
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120126
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt400159
gAt>gGt69850684841
gAt>gMt1010
gAt>gRt260262
gAt>gTt160156
gAt>gWt2020
gCa>gAa1301210
gCa>gGa11065
gCa>gMa1010
gCa>gTa306030225
gCa>gYa160150
gCc>gAc9098
gCc>gGc7075
gCc>gTc8408419
gCc>gYc3030
gCg>gAg3033
gCg>gTg220221
gCg>gYg2020
gCt>gAt350207
gCt>gGt6906968
gCt>gMt120120
gCt>gSt1010
gCt>gTt853078150
gCt>gYt240241
gGa>gAa2002014
gGa>gKa140142
gGa>gRa1010
gGa>gSa1010
gGa>gTa1530152120
gGc>gAc188018811
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6060
gGg>gAg9093
gGg>gTg1011
gGt>gAt510309
gGt>gCt8083
gGt>gKt430311
gGt>gRt1010
gGt>gTt940088216
gTa>gAa1010
gTa>gCa5102514
gTa>gGa5055
gTa>gYa2020
gTc>gAc2020
gTc>gCc7507010
gTc>gGc4044
gTc>gKc1010
gTc>gYc3030
gTg>gAg4043
gTg>gCg1601110
gTg>gGg5055
gTg>gKg1010
gTg>gYg1010
gTt>gAt210107
gTt>gCt8904936
gTt>gGt300208
gTt>gKt400400
gTt>gWt2021
gTt>gYt2020
gaA>gaC680288
gaA>gaG48506313
gaA>gaM1010
gaA>gaR9091
gaA>gaT12601510
gaA>gaW160140
gaC>gaA9507311
gaC>gaG5055
gaC>gaM2020
gaC>gaT9520457184
gaC>gaY140140
gaG>gaA42308516
gaG>gaC2501210
gaG>gaK7070
gaG>gaS1010
gaG>gaT9407813
gaT>gaA2960194187
gaT>gaC760017955
gaT>gaG5401813
gaT>gaW2020
gaT>gaY100102
gcA>gcC7701410
gcA>gcG6902614
gcA>gcR1010
gcA>gcT42506650
gcA>gcW110110
gcC>gcA14402210
gcC>gcG150109
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011130
gcC>gcY6063
gcG>gcA12801710
gcG>gcC2401918
gcG>gcK1011
gcG>gcR2020
gcG>gcT9405417
gcT>gcA47901511
gcT>gcC5880296196
gcT>gcG6901410
gcT>gcS1011
gcT>gcW2020
gcT>gcY9090
ggA>ggC200169
ggA>ggG7504216
ggA>ggR1010
ggA>ggT3200131124
ggC>ggA5801810
ggC>ggG7077
ggC>ggT425010319
ggC>ggY2022
ggG>ggA8803110
ggG>ggC150109
ggG>ggT240249
ggT>ggA26601510
ggT>ggC30304214
ggT>ggG460129
ggT>ggW1010
ggT>ggY3030
gtA>gtC7601010
gtA>gtG25207213
gtA>gtR3030
gtA>gtT41001510
gtC>gtA1750919
gtC>gtG38098
gtC>gtM1010
gtC>gtT502021736
gtC>gtY7070
gtG>gtA25106925
gtG>gtC10402811
gtG>gtK6060
gtG>gtR3030
gtG>gtT288012930
gtT>gtA39201612
gtT>gtC35306427
gtT>gtG27201710
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210212
tAc>tTc320119
tAc>tWc1010
tAt>tCt1010
tAt>tGt1142011391082
tAt>tMt1010
tAt>tRt1010
tAt>tTt260119
tAt>tWt2020
tCa>tGa17076
tCa>tMa1010
tCa>tTa105901043221
tCa>tYa110114
tCc>tAc100109
tCc>tGc6065
tCc>tTc500509
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg390399
tCg>tYg3030
tCt>tAt390396
tCt>tGt100108
tCt>tMt8080
tCt>tTt227022744
tCt>tYt220225
tGc>tAc1301312
tGc>tTc10096
tGg>tCg2020
tGg>tKg2020
tGg>tTg280280
tGt>tAt220225
tGt>tCt3020
tGt>tKt5041
tGt>tRt1010
tGt>tTt3003010
tTa>tAa9094
tTa>tCa1671016671654
tTa>tGa6065
tTa>tWa2020
tTa>tYa9091
tTc>tAc9064
tTc>tCc1401410
tTc>tGc160115
tTc>tYc1010
tTg>tAg9098
tTg>tCg5054
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt1830138131
tTt>tCt4001510
tTt>tGt1401410
tTt>tKt2020
tTt>tWt1010
tTt>tYt100101
taA>taG1010
taA>taR1010
taC>taA1011
taC>taT225601657227
taC>taY200201
taG>taT1010
taT>taA4040
taT>taC7990208102
taT>taG540540
taT>taK4040
taT>taY3030
tcA>tcC860109
tcA>tcG9203527
tcA>tcR3030
tcA>tcT38701913
tcA>tcW1010
tcC>tcA530148
tcC>tcG8086
tcC>tcT340018232
tcC>tcY5050
tcG>tcA2802210
tcG>tcC8088
tcG>tcT4803210
tcT>tcA41301610
tcT>tcC16603115
tcT>tcG220119
tcT>tcY2020
tgA>tgG2021
tgC>tgA1010
tgC>tgT331013322
tgC>tgY7071
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190190
tgT>tgA3030
tgT>tgC35803312
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800119
ttA>ttG951058822
ttA>ttR4041
ttA>ttT29101712
ttA>ttW1010
ttC>ttA240198
ttC>ttG1001010
ttC>ttS2020
ttC>ttT774207066186
ttC>ttY320310
ttG>ttA43406516
ttG>ttC6001611
ttG>ttK160160
ttG>ttS1011
ttG>ttT14180128783
ttT>ttA5703610
ttT>ttC64005827
ttT>ttG5053
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: agC>agT