2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set1664
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801410
Aaa>Gaa290197
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1010
Aac>Cac7071
Aac>Gac4603016
Aac>Mac2020
Aac>Rac1011
Aac>Tac10081
Aac>Wac1010
Aag>Cag290129
Aag>Gag280167
Aag>Mag4043
Aag>Rag2020
Aag>Tag13085
Aag>Wag1010
Aat>Cat4701610
Aat>Gat11404224
Aat>Mat1010
Aat>Rat5052
Aat>Tat190163
Aat>Wat1501510
Aca>Cca7076
Aca>Gca9503411
Aca>Rca2020
Aca>Tca3302319
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200108
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1011
Acg>Gcg2201411
Acg>Rcg2020
Act>Cct17075
Act>Gct12305111
Act>Mct2020
Act>Rct3031
Act>Tct6001611
Act>Wct120128
Aga>Cga9101210
Aga>Gga110119
Aga>Tga2021
Agc>Ggc400309
Agc>Rgc2020
Agg>Cgg32099
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710715
Agt>Ggt10904715
Agt>Mgt360360
Agt>Rgt2020
Agt>Tgt2501310
Agt>Wgt1010
Ata>Cta8082
Ata>Gta12405712
Ata>Rta2020
Ata>Tta200155
Atc>Ctc1701210
Atc>Gtc6703110
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150158
Atg>Gtg630516
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170127
Atg>Wtg1010
Att>Ctt3501410
Att>Gtt500032711
Att>Mtt3031
Att>Rtt6061
Att>Ttt230135
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303618
Caa>Gaa6202411
Caa>Maa2021
Caa>Saa1010
Caa>Taa260207
Caa>Yaa9084
Cac>Aac13088
Cac>Gac1010
Cac>Tac9809714
Cac>Yac5051
Cag>Aag390158
Cag>Gag260129
Cag>Mag3030
Cag>Tag12065
Cag>Yag3030
Cat>Aat17099
Cat>Gat1010
Cat>Mat2020
Cat>Tat171016528
Cat>Yat100104
Cca>Aca2501410
Cca>Gca5053
Cca>Mca2020
Cca>Sca1010
Cca>Tca494047633
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc3403417
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240243
Cct>Act190178
Cct>Gct19098
Cct>Mct5050
Cct>Tct170016143
Cct>Yct6052
Cga>Aga19099
Cga>Yga1010
Cgc>Agc6063
Cgc>Ggc1010
Cgc>Tgc240246
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1011
Cgt>Tgt16701645
Cgt>Ygt4040
Cta>Ata340168
Cta>Gta2022
Cta>Tta822049824
Cta>Yta5050
Ctc>Atc3031
Ctc>Gtc1010
Ctc>Mtc8086
Ctc>Ttc193011720
Ctc>Ytc6060
Ctg>Atg7074
Ctg>Gtg8080
Ctg>Mtg1011
Ctg>Ttg17208013
Ctg>Ytg1010
Ctt>Att380318
Ctt>Gtt200105
Ctt>Stt3031
Ctt>Ttt625037378
Ctt>Ytt160162
GAa>CCa3033
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa8405115
Gaa>Caa330208
Gaa>Kaa3030
Gaa>Raa8082
Gaa>Saa1011
Gaa>Taa1901810
Gac>Aac29402827
Gac>Cac170175
Gac>Kac3031
Gac>Sac2020
Gac>Tac11601155
Gag>Aag350196
Gag>Cag9098
Gag>Dag1010
Gag>Rag1010
Gag>Tag10095
Gat>Aat7305014
Gat>Cat360359
Gat>Kat130124
Gat>Rat3030
Gat>Tat190017852
Gca>Aca245021112
Gca>Cca1501010
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606619
Gcc>Acc4003011
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4041
Gcc>Tcc160137
Gcg>Acg1801311
Gcg>Kcg1010
Gcg>Tcg210213
Gct>Act16508921
Gct>Cct24085
Gct>Kct2402211
Gct>Rct8082
Gct>Sct2020
Gct>Tct200015065
Gga>Aga320322
Gga>Cga1647016471645
Gga>Rga160160
Gga>Sga100100
Gga>Tga6061
Ggc>Agc3503514
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390394
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt2810244144
Ggt>Cgt4030
Ggt>Kgt7071
Ggt>Rgt100101
Ggt>Tgt660653
Gta>Ata315020221
Gta>Cta6062
Gta>Kta9082
Gta>Rta1010
Gta>Tta304029921
Gtc>Atc720279
Gtc>Ctc6062
Gtc>Ktc1011
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc4504512
Gtg>Atg5302212
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg114011431
Gtt>Att327011415
Gtt>Ctt4502011
Gtt>Ktt100101
Gtt>Rtt4041
Gtt>Stt2020
Gtt>Ttt232022945
TAt>GTt7070
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160150
Tac>Cac4903912
Tac>Gac2020
Tac>Yac140141
Tat>Aat9096
Tat>Cat1901914
Tat>Gat5053
Tat>Kat1010
Tat>Yat3031
Tca>Aca4701410
Tca>Cca6403410
Tca>Gca530189
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc1201110
Tcc>Ccc5052
Tcc>Gcc260129
Tcc>Wcc3031
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420119
Tct>Cct260219
Tct>Gct6701810
Tct>Wct1010
Tga>Aga1011
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5051
Tgg>Cgg1010
Tgg>Wgg2022
Tgt>Agt14095
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1011
Tgt>Ygt3031
Tta>Ata6201611
Tta>Cta60105111
Tta>Gta240118
Tta>Kta1010
Tta>Yta5054
Ttc>Atc3030
Ttc>Ctc890796
Ttc>Gtc8085
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg3701110
Ttg>Ctg567020612
Ttg>Gtg160158
Ttg>Ytg8082
Ttt>Att17095
Ttt>Ctt230020515
Ttt>Gtt270199
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190119
aAa>aGa10205513
aAa>aRa1010
aAa>aTa19085
aAa>aWa2021
aAc>aCc210118
aAc>aGc5103012
aAc>aMc2020
aAc>aRc1010
aAc>aTc8085
aAc>aWc3031
aAg>aCg180129
aAg>aGg223020611
aAg>aMg1010
aAg>aRg5051
aAg>aTg18085
aAg>aWg1010
aAt>aCt11605019
aAt>aGt11707320
aAt>aMt2020
aAt>aRt6062
aAt>aTt9085
aAt>aWt4040
aCa>aAa164014613
aCa>aBa1010
aCa>aGa150108
aCa>aMa3030
aCa>aTa345033350
aCa>aYa210216
aCc>aAc12075
aCc>aGc9088
aCc>aTc26970266320
aCc>aYc6061
aCg>aAg1011
aCg>aGg4044
aCg>aTg2760274240
aCg>aYg4041
aCt>aAt7205630
aCt>aGt330108
aCt>aSt1011
aCt>aTt691061195
aCt>aYt240245
aGA>aAC2022
aGa>aAa8303410
aGa>aCa2902410
aGa>aKa4040
aGa>aRa6063
aGa>aSa2020
aGa>aTa4604612
aGc>aAc150107
aGc>aCc7075
aGc>aKc1010
aGc>aRc2020
aGc>aSc1011
aGc>aTc190191
aGg>aAg1715017071655
aGg>aCg1010
aGg>aKg2022
aGg>aRg9090
aGg>aTg4040
aGt>aAt13307510
aGt>aCt9504112
aGt>aKt110111
aGt>aRt1011
aGt>aSt350350
aGt>aTt154014914
aTa>aAa3031
aTa>aCa9206636
aTa>aGa7065
aTa>aYa2020
aTc>aAc1011
aTc>aCc6206144
aTc>aGc1010
aTc>aYc2021
aTg>aAg4040
aTg>aCg210213
aTg>aDg1010
aTg>aGg4044
aTg>aKg2020
aTt>aAt7076
aTt>aCt7404412
aTt>aGt4040
aTt>aWt1010
aTt>aYt6061
aaA>aaC3101910
aaA>aaG762013511
aaA>aaM1010
aaA>aaR6063
aaA>aaT420188
aaA>aaW2021
aaC>aaA130135
aaC>aaG7076
aaC>aaM2020
aaC>aaT1281071554
aaC>aaY240221
aaG>aaA66104413
aaG>aaC150151
aaG>aaK4040
aaG>aaR3030
aaG>aaT168015137
aaT>aaA610168
aaT>aaC761015899
aaT>aaG160116
aaT>aaK1011
aaT>aaW3030
aaT>aaY9091
acA>acC12701111
acA>acG205012416
acA>acM2020
acA>acR4040
acA>acT56902710
acA>acW1011
acC>acA11701610
acC>acG10055
acC>acM2020
acC>acT3790207120
acC>acY130132
acG>acA14702511
acG>acC6064
acG>acK1010
acG>acR3030
acG>acT9506214
acT>acA52402012
acT>acC406011635
acT>acG7502519
acT>acW2020
acT>acY7072
agA>agC23085
agA>agG19703022
agA>agM1010
agA>agR7071
agA>agT4101311
agC>agA560560
agC>agM4040
agC>agT17970170013
agC>agY2020
agG>agA1841184116641664
agG>agC1010
agG>agK2020
agG>agR100101
agG>agT290248
agT>agA420119
agT>agC15002810
agT>agG9074
agT>agW1010
agT>agY2020
atA>atC450109
atA>atG180189
atA>atM2022
atA>atR1010
atA>atT31401110
atA>atW1010
atC>atA1080259
atC>atG9055
atC>atM2020
atC>atT589033165
atC>atY4041
atG>atA9509210
atG>atC120123
atG>atK9092
atG>atR2020
atG>atT232021434
atT>atA34801310
atT>atC26003414
atT>atG120127
atT>atW2101210
atT>atY3031
cAa>cCa4601513
cAa>cGa4403411
cAa>cMa5052
cAa>cRa1010
cAa>cTa180188
cAa>cWa1010
cAc>cGc3030
cAg>cCg21066
cAg>cGg240196
cAg>cTg130108
cAg>cWg1011
cAt>cCt1010
cAt>cGt560566
cAt>cMt5040
cAt>cRt3030
cAt>cTt4041
cAt>cWt1010
cCa>cAa2101311
cCa>cGa2010
cCa>cMa1010
cCa>cSa1011
cCa>cTa165016520
cCa>cYa150150
cCc>cAc1011
cCc>cGc2020
cCc>cTc18201821
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290125
cCt>cGt5051
cCt>cTt8126080531650
cCt>cYt240242
cGa>cTa3030
cGc>cAc200203
cGc>cTc9096
cGg>cAg6062
cGg>cCg3031
cGt>cAt170175
cGt>cKt1010
cGt>cTt240247
cTa>cAa1010
cTa>cCa9098
cTa>cWa1011
cTa>cYa2020
cTc>cAc3030
cTc>cCc320326
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2021
cTg>cGg2021
cTg>cWg1010
cTt>cAt250205
cTt>cCt170157
cTt>cDt1010
cTt>cGt110106
cTt>cWt2021
cTt>cYt9091
caA>caC3301912
caA>caG42504513
caA>caM2020
caA>caR5050
caA>caT370169
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT30909812
caC>caY5051
caG>caA46005218
caG>caC250238
caG>caK110111
caG>caR1011
caG>caT32640321140
caT>caA9065
caT>caC358015210
caT>caG9095
caT>caK1010
caT>caY6060
ccA>ccC5701514
ccA>ccG9704911
ccA>ccM1010
ccA>ccR5050
ccA>ccT37203122
ccA>ccW2020
ccC>ccA4501310
ccC>ccG10099
ccC>ccM1010
ccC>ccT20708511
ccC>ccY3031
ccG>ccA5202313
ccG>ccC100109
ccG>ccK5051
ccG>ccT149012220
ccT>ccA34901810
ccT>ccC15404915
ccT>ccG7001911
ccT>ccW3030
ccT>ccY5052
cgA>cgC5055
cgA>cgG6065
cgA>cgR1010
cgA>cgT26066
cgC>cgA130109
cgC>cgT10303915
cgC>cgY1010
cgG>cgA320139
cgG>cgC9099
cgG>cgR1011
cgG>cgT2701610
cgT>cgA650109
cgT>cgC444037313
cgT>cgG16065
cgT>cgY4040
ctA>ctC4301010
ctA>ctG9801310
ctA>ctR1010
ctA>ctT16101712
ctA>ctW3031
ctC>ctA8401210
ctC>ctG580159
ctC>ctM1011
ctC>ctT165601369125
ctC>ctY180183
ctG>ctA11502011
ctG>ctC2001010
ctG>ctK2020
ctG>ctT7104724
ctT>ctA33102012
ctT>ctC320010317
ctT>ctG19402711
ctT>ctK1010
ctT>ctY3032
gAa>gCa150124
gAa>gGa610545
gAa>gRa2020
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc1601210
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt400158
gAt>gGt6985068481658
gAt>gMt1010
gAt>gRt260261
gAt>gTt160154
gAt>gWt2021
gCa>gAa1301210
gCa>gGa11065
gCa>gMa1010
gCa>gTa306030226
gCa>gYa160153
gCc>gAc9098
gCc>gGc7076
gCc>gTc8408424
gCc>gYc3030
gCg>gAg3033
gCg>gTg220222
gCg>gYg2021
gCt>gAt350205
gCt>gGt690695
gCt>gMt120121
gCt>gSt1010
gCt>gTt853078193
gCt>gYt240245
gGa>gAa200200
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301523
gGc>gAc18801887
gGc>gCc1010
gGc>gKc3031
gGc>gRc6061
gGc>gTc6062
gGg>gAg9093
gGg>gTg1011
gGt>gAt5103011
gGt>gCt8084
gGt>gKt430317
gGt>gRt1010
gGt>gTt940088213
gTa>gAa1010
gTa>gCa5102513
gTa>gGa5055
gTa>gYa2020
gTc>gAc2020
gTc>gCc7507010
gTc>gGc4044
gTc>gKc1010
gTc>gYc3031
gTg>gAg4043
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1010
gTt>gAt210107
gTt>gCt8904911
gTt>gGt3002014
gTt>gKt400401
gTt>gWt2022
gTt>gYt2021
gaA>gaC680286
gaA>gaG48506323
gaA>gaM1010
gaA>gaR9092
gaA>gaT12601512
gaA>gaW1601411
gaC>gaA9507348
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045750
gaC>gaY140143
gaG>gaA42308545
gaG>gaC250129
gaG>gaK7070
gaG>gaS1011
gaG>gaT9407825
gaT>gaA29601949
gaT>gaC760017926
gaT>gaG5401812
gaT>gaW2020
gaT>gaY100103
gcA>gcC7701412
gcA>gcG6902613
gcA>gcR1010
gcA>gcT42506613
gcA>gcW110110
gcC>gcA14402218
gcC>gcG150109
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011120
gcC>gcY6060
gcG>gcA12801710
gcG>gcC240199
gcG>gcK1010
gcG>gcR2021
gcG>gcT9405415
gcT>gcA47901510
gcT>gcC588029615
gcT>gcG6901411
gcT>gcS1011
gcT>gcW2020
gcT>gcY9091
ggA>ggC200169
ggA>ggG7504216
ggA>ggR1010
ggA>ggT320013111
ggC>ggA5801810
ggC>ggG7077
ggC>ggT425010317
ggC>ggY2021
ggG>ggA8803114
ggG>ggC1501010
ggG>ggT2402410
ggT>ggA26601510
ggT>ggC30304213
ggT>ggG460129
ggT>ggW1011
ggT>ggY3030
gtA>gtC7601010
gtA>gtG25207236
gtA>gtR3031
gtA>gtT41001511
gtC>gtA1750919
gtC>gtG38098
gtC>gtM1010
gtC>gtT502021747
gtC>gtY7071
gtG>gtA25106911
gtG>gtC10402810
gtG>gtK6063
gtG>gtR3031
gtG>gtT288012927
gtT>gtA39201611
gtT>gtC35306421
gtT>gtG27201710
gtT>gtK1010
gtT>gtY2021
tAc>tCc5055
tAc>tGc210210
tAc>tTc320119
tAc>tWc1010
tAt>tCt1010
tAt>tGt11420113930
tAt>tMt1010
tAt>tRt1010
tAt>tTt260119
tAt>tWt2020
tCa>tGa17076
tCa>tMa1010
tCa>tTa10590104322
tCa>tYa110110
tCc>tAc100109
tCc>tGc6065
tCc>tTc500509
tCc>tYc6061
tCg>tAg3033
tCg>tGg1010
tCg>tTg3903913
tCg>tYg3030
tCt>tAt390396
tCt>tGt100105
tCt>tMt8084
tCt>tTt227022748
tCt>tYt220224
tGc>tAc130135
tGc>tTc10096
tGg>tCg2021
tGg>tKg2021
tGg>tTg2802813
tGt>tAt220224
tGt>tCt3020
tGt>tKt5042
tGt>tRt1010
tGt>tTt300309
tTa>tAa9093
tTa>tCa16710166710
tTa>tGa6065
tTa>tWa2020
tTa>tYa9092
tTc>tAc9064
tTc>tCc140149
tTc>tGc160118
tTc>tYc1010
tTg>tAg9098
tTg>tCg5054
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt183013813
tTt>tCt4001511
tTt>tGt140149
tTt>tKt2020
tTt>tWt1010
tTt>tYt100101
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657101
taC>taY200203
taG>taT1010
taT>taA4040
taT>taC799020831
taT>taG5405419
taT>taK4040
taT>taY3031
tcA>tcC860109
tcA>tcG9203513
tcA>tcR3031
tcA>tcT38701911
tcA>tcW1010
tcC>tcA530148
tcC>tcG8086
tcC>tcT340018228
tcC>tcY5053
tcG>tcA2802211
tcG>tcC8088
tcG>tcT4803213
tcT>tcA41301611
tcT>tcC16603111
tcT>tcG220119
tcT>tcY2022
tgA>tgG2021
tgC>tgA1010
tgC>tgT331013333
tgC>tgY7071
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190197
tgT>tgA3031
tgT>tgC35803311
tgT>tgG2020
tgT>tgK3030
tgT>tgY3031
ttA>ttC800119
ttA>ttG951058821
ttA>ttR4041
ttA>ttT29101710
ttA>ttW1011
ttC>ttA240198
ttC>ttG100108
ttC>ttS2020
ttC>ttT7742070661662
ttC>ttY320312
ttG>ttA43406519
ttG>ttC6001610
ttG>ttK160160
ttG>ttS1011
ttG>ttT14180128749
ttT>ttA5703610
ttT>ttC64005816
ttT>ttG5054
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: agG>agA