2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set214
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1010
AAt>CTt1010
ACa>GAa2020
AaA>CaT3031
Aaa>Caa280147
Aaa>Gaa290196
Aaa>Maa2020
Aaa>Taa14076
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460307
Aac>Mac2020
Aac>Rac1010
Aac>Tac10081
Aac>Wac1010
Aag>Cag290127
Aag>Gag280166
Aag>Mag4040
Aag>Rag2020
Aag>Tag13086
Aag>Wag1010
Aat>Cat470166
Aat>Gat1140426
Aat>Mat1010
Aat>Rat5050
Aat>Tat190162
Aat>Wat150152
Aca>Cca7074
Aca>Gca950348
Aca>Rca2020
Aca>Tca330236
Aca>Wca1010
Acc>Ccc1010
Acc>Gcc200106
Acc>Rcc1010
Acc>Tcc9086
Acc>Wcc1010
Acg>Gcg220146
Acg>Rcg2020
Act>Cct17075
Act>Gct1230518
Act>Mct2020
Act>Rct3030
Act>Tct600168
Act>Wct120121
Aga>Cga910126
Aga>Gga110116
Aga>Tga2020
Agc>Ggc400307
Agc>Rgc2020
Agg>Cgg32096
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4041
Agt>Cgt710710
Agt>Ggt10904717
Agt>Mgt360361
Agt>Rgt2020
Agt>Tgt250137
Agt>Wgt1010
Ata>Cta8080
Ata>Gta1240577
Ata>Rta2020
Ata>Tta200156
Atc>Ctc170127
Atc>Gtc670316
Atc>Mtc1010
Atc>Ttc3031
Atg>Ctg150156
Atg>Gtg630516
Atg>Mtg3030
Atg>Rtg3031
Atg>Ttg170126
Atg>Wtg1010
Att>Ctt350146
Att>Gtt500032714
Att>Mtt3030
Att>Rtt6060
Att>Ttt230135
CAT>TTG3031
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa630369
Caa>Gaa620247
Caa>Maa2020
Caa>Saa1010
Caa>Taa260206
Caa>Yaa9080
Cac>Aac13086
Cac>Gac1010
Cac>Tac980979
Cac>Yac5050
Cag>Aag390157
Cag>Gag260127
Cag>Mag3030
Cag>Tag12066
Cag>Yag3030
Cat>Aat17096
Cat>Gat1010
Cat>Mat2020
Cat>Tat17101657
Cat>Yat100100
Cca>Aca250146
Cca>Gca5051
Cca>Mca2020
Cca>Sca1010
Cca>Tca494047610
Cca>Yca7070
Ccc>Acc8081
Ccc>Mcc1010
Ccc>Tcc340341
Ccg>Acg2021
Ccg>Gcg1010
Ccg>Tcg240242
Cct>Act190172
Cct>Gct19096
Cct>Mct5050
Cct>Tct17001616
Cct>Yct6050
Cga>Aga19096
Cga>Yga1010
Cgc>Agc6061
Cgc>Ggc1010
Cgc>Tgc240241
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62086
Cgt>Ggt1010
Cgt>Tgt167016442
Cgt>Ygt4040
Cta>Ata340166
Cta>Gta2021
Cta>Tta822049814
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1011
Ctc>Mtc8081
Ctc>Ttc19301176
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg1720806
Ctg>Ytg1010
Ctt>Att380313
Ctt>Gtt200105
Ctt>Stt3030
Ctt>Ttt625037315
Ctt>Ytt160161
GAa>CCa3030
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa840519
Gaa>Caa330209
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190186
Gac>Aac29402828
Gac>Cac170176
Gac>Kac3030
Gac>Sac2020
Gac>Tac11601154
Gag>Aag350196
Gag>Cag9096
Gag>Dag1010
Gag>Rag1010
Gag>Tag10095
Gat>Aat730506
Gat>Cat360356
Gat>Kat130120
Gat>Rat3030
Gat>Tat19001789
Gca>Aca24502119
Gca>Cca150106
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606610
Gcc>Acc400308
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160131
Gcg>Acg180136
Gcg>Kcg1010
Gcg>Tcg210211
Gct>Act1650898
Gct>Cct24086
Gct>Kct240221
Gct>Rct8080
Gct>Sct2020
Gct>Tct200015012
Gga>Aga320321
Gga>Cga16470164728
Gga>Rga160160
Gga>Sga100100
Gga>Tga6061
Ggc>Agc350355
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390394
Ggg>Agg8086
Ggg>Tgg1010
Ggt>Agt281024414
Ggt>Cgt4031
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660654
Gta>Ata315020248
Gta>Cta6061
Gta>Kta9080
Gta>Rta1010
Gta>Tta30402998
Gtc>Atc720276
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450459
Gtg>Atg530226
Gtg>Ctg18901891
Gtg>Stg1010
Gtg>Ttg11401148
Gtt>Att32701148
Gtt>Ctt450207
Gtt>Ktt100100
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt23202297
TAt>GTt7070
TGc>GAc1010
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2020
TTt>CAt2020
TTt>CCt1010
Tac>Aac160152
Tac>Cac490399
Tac>Gac2021
Tac>Yac140140
Tat>Aat9096
Tat>Cat190196
Tat>Gat5051
Tat>Kat1010
Tat>Yat3030
Tca>Aca470147
Tca>Cca640346
Tca>Gca530186
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120117
Tcc>Ccc5051
Tcc>Gcc260127
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13086
Tcg>Gcg10055
Tct>Act420116
Tct>Cct260216
Tct>Gct670186
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14097
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620166
Tta>Cta6010518
Tta>Gta240117
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3031
Ttc>Ctc890798
Ttc>Gtc8086
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370116
Ttg>Ctg567020646
Ttg>Gtg160156
Ttg>Ytg8081
Ttt>Att17096
Ttt>Ctt230020510
Ttt>Gtt270196
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190117
aAa>aGa1020557
aAa>aRa1010
aAa>aTa19086
aAa>aWa2020
aAc>aCc210117
aAc>aGc510307
aAc>aMc2020
aAc>aRc1010
aAc>aTc8085
aAc>aWc3030
aAg>aCg180126
aAg>aGg22302068
aAg>aMg1010
aAg>aRg5051
aAg>aTg18086
aAg>aWg1010
aAt>aCt1160506
aAt>aGt1170738
aAt>aMt2020
aAt>aRt6060
aAt>aTt9085
aAt>aWt4040
aCa>aAa16401469
aCa>aBa1010
aCa>aGa150107
aCa>aMa3030
aCa>aTa345033314
aCa>aYa210210
aCc>aAc12076
aCc>aGc9086
aCc>aTc26970266329
aCc>aYc6060
aCg>aAg1010
aCg>aGg4041
aCg>aTg276027412
aCg>aYg4040
aCt>aAt720566
aCt>aGt330107
aCt>aSt1010
aCt>aTt691061111
aCt>aYt240240
aGA>aAC2020
aGa>aAa830347
aGa>aCa290246
aGa>aKa4040
aGa>aRa6060
aGa>aSa2020
aGa>aTa4604610
aGc>aAc150105
aGc>aCc7075
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190190
aGg>aAg17150170735
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330757
aGt>aCt950416
aGt>aKt110110
aGt>aRt1010
aGt>aSt350351
aGt>aTt15401498
aTa>aAa3030
aTa>aCa920666
aTa>aGa7066
aTa>aYa2020
aTc>aAc1010
aTc>aCc620617
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210210
aTg>aDg1010
aTg>aGg4041
aTg>aKg2020
aTt>aAt7077
aTt>aCt740446
aTt>aGt4040
aTt>aWt1010
aTt>aYt6061
aaA>aaC310197
aaA>aaG76201359
aaA>aaM1010
aaA>aaR6060
aaA>aaT420186
aaA>aaW2020
aaC>aaA130135
aaC>aaG7075
aaC>aaM2020
aaC>aaT1281071519
aaC>aaY240221
aaG>aaA6610447
aaG>aaC150151
aaG>aaK4040
aaG>aaR3030
aaG>aaT168015116
aaT>aaA610167
aaT>aaC76101586
aaT>aaG160116
aaT>aaK1010
aaT>aaW3030
aaT>aaY9090
acA>acC1270116
acA>acG20501247
acA>acM2020
acA>acR4040
acA>acT5690276
acA>acW1010
acC>acA1170166
acC>acG10055
acC>acM2020
acC>acT379020715
acC>acY130130
acG>acA1470256
acG>acC6061
acG>acK1010
acG>acR3030
acG>acT9506215
acT>acA5240207
acT>acC406011612
acT>acG750258
acT>acW2020
acT>acY7070
agA>agC23085
agA>agG1970307
agA>agM1010
agA>agR7070
agA>agT410136
agC>agA560561
agC>agM4040
agC>agT17970170017
agC>agY2020
agG>agA18410166434
agG>agC1011
agG>agK2020
agG>agR100100
agG>agT290247
agT>agA420116
agT>agC1500286
agT>agG9071
agT>agW1010
agT>agY2020
atA>atC450106
atA>atG180186
atA>atM2020
atA>atR1010
atA>atT3140116
atA>atW1010
atC>atA1080258
atC>atG9055
atC>atM2020
atC>atT589033117
atC>atY4040
atG>atA950926
atG>atC120121
atG>atK9090
atG>atR2020
atG>atT232232214214
atT>atA3480136
atT>atC2600347
atT>atG120125
atT>atW210120
atT>atY3030
cAa>cCa460156
cAa>cGa440348
cAa>cMa5050
cAa>cRa1010
cAa>cTa180186
cAa>cWa1010
cAc>cGc3030
cAg>cCg21065
cAg>cGg240196
cAg>cTg130106
cAg>cWg1010
cAt>cCt1010
cAt>cGt560565
cAt>cMt5040
cAt>cRt3030
cAt>cTt4041
cAt>cWt1010
cCa>cAa210136
cCa>cGa2011
cCa>cMa1010
cCa>cSa1010
cCa>cTa16501656
cCa>cYa150150
cCc>cAc1011
cCc>cGc2020
cCc>cTc18201826
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290125
cCt>cGt5051
cCt>cTt812608053145
cCt>cYt240240
cGa>cTa3030
cGc>cAc200200
cGc>cTc9090
cGg>cAg6062
cGg>cCg3030
cGt>cAt170170
cGt>cKt1010
cGt>cTt240241
cTa>cAa1010
cTa>cCa9096
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320321
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2020
cTg>cWg1010
cTt>cAt250207
cTt>cCt170151
cTt>cDt1010
cTt>cGt110106
cTt>cWt2020
cTt>cYt9091
caA>caC330196
caA>caG4250457
caA>caM2020
caA>caR5050
caA>caT370167
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT3090989
caC>caY5050
caG>caA4600526
caG>caC250237
caG>caK110110
caG>caR1010
caG>caT32640321137
caT>caA9061
caT>caC35801527
caT>caG9095
caT>caK1010
caT>caY6060
ccA>ccC570156
ccA>ccG970496
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720317
ccA>ccW2020
ccC>ccA450137
ccC>ccG10096
ccC>ccM1010
ccC>ccT2070856
ccC>ccY3030
ccG>ccA520237
ccG>ccC100107
ccG>ccK5050
ccG>ccT149012214
ccT>ccA3490186
ccT>ccC1540496
ccT>ccG700196
ccT>ccW3030
ccT>ccY5050
cgA>cgC5051
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130106
cgC>cgT1030396
cgC>cgY1010
cgG>cgA320136
cgG>cgC9096
cgG>cgR1010
cgG>cgT270166
cgT>cgA650106
cgT>cgC44403738
cgT>cgG16065
cgT>cgY4040
ctA>ctC430106
ctA>ctG980136
ctA>ctR1010
ctA>ctT1610177
ctA>ctW3031
ctC>ctA840126
ctC>ctG580156
ctC>ctM1010
ctC>ctT16560136923
ctC>ctY180181
ctG>ctA1150206
ctG>ctC200106
ctG>ctK2020
ctG>ctT710476
ctT>ctA3310208
ctT>ctC32001038
ctT>ctG1940276
ctT>ctK1010
ctT>ctY3030
gAa>gCa150122
gAa>gGa610545
gAa>gRa2020
gAa>gTa19095
gAa>gWa1010
gAc>gCc130135
gAc>gGc160126
gAc>gMc2020
gAc>gRc1010
gAc>gTc3030
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt400156
gAt>gGt698506848139
gAt>gMt1010
gAt>gRt260261
gAt>gTt160152
gAt>gWt2020
gCa>gAa130126
gCa>gGa11066
gCa>gMa1010
gCa>gTa306030211
gCa>gYa160150
gCc>gAc9097
gCc>gGc7076
gCc>gTc840845
gCc>gYc3030
gCg>gAg3031
gCg>gTg220221
gCg>gYg2020
gCt>gAt350207
gCt>gGt690695
gCt>gMt120122
gCt>gSt1010
gCt>gTt853078118
gCt>gYt240241
gGa>gAa200200
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301520
gGc>gAc18801888
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6060
gGg>gAg9091
gGg>gTg1010
gGt>gAt510307
gGt>gCt8083
gGt>gKt430310
gGt>gRt1010
gGt>gTt940088215
gTa>gAa1010
gTa>gCa510257
gTa>gGa5055
gTa>gYa2020
gTc>gAc2021
gTc>gCc750707
gTc>gGc4041
gTc>gKc1010
gTc>gYc3030
gTg>gAg4041
gTg>gCg160115
gTg>gGg5055
gTg>gKg1010
gTg>gYg1010
gTt>gAt210105
gTt>gCt890498
gTt>gGt300206
gTt>gKt400403
gTt>gWt2020
gTt>gYt2020
gaA>gaC680287
gaA>gaG4850636
gaA>gaM1010
gaA>gaR9091
gaA>gaT1260156
gaA>gaW160141
gaC>gaA950737
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045720
gaC>gaY140140
gaG>gaA4230857
gaG>gaC250126
gaG>gaK7070
gaG>gaS1010
gaG>gaT940788
gaT>gaA29601946
gaT>gaC760017912
gaT>gaG540187
gaT>gaW2020
gaT>gaY100100
gcA>gcC770146
gcA>gcG690266
gcA>gcR1010
gcA>gcT4250667
gcA>gcW110111
gcC>gcA1440226
gcC>gcG150106
gcC>gcM2020
gcC>gcS1010
gcC>gcT41501119
gcC>gcY6060
gcG>gcA1280176
gcG>gcC240196
gcG>gcK1010
gcG>gcR2020
gcG>gcT940547
gcT>gcA4790156
gcT>gcC588029613
gcT>gcG690147
gcT>gcS1010
gcT>gcW2020
gcT>gcY9090
ggA>ggC200168
ggA>ggG7504211
ggA>ggR1010
ggA>ggT32001316
ggC>ggA580186
ggC>ggG7075
ggC>ggT42501038
ggC>ggY2020
ggG>ggA880316
ggG>ggC150106
ggG>ggT240246
ggT>ggA2660156
ggT>ggC3030426
ggT>ggG460127
ggT>ggW1010
ggT>ggY3030
gtA>gtC760106
gtA>gtG2520728
gtA>gtR3030
gtA>gtT4100156
gtC>gtA1750917
gtC>gtG38096
gtC>gtM1010
gtC>gtT502021710
gtC>gtY7070
gtG>gtA2510696
gtG>gtC1040286
gtG>gtK6060
gtG>gtR3030
gtG>gtT28801298
gtT>gtA3920167
gtT>gtC3530646
gtT>gtG2720176
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc320117
tAc>tWc1010
tAt>tCt1010
tAt>tGt11420113912
tAt>tMt1010
tAt>tRt1010
tAt>tTt260116
tAt>tWt2020
tCa>tGa17076
tCa>tMa1010
tCa>tTa10590104317
tCa>tYa110110
tCc>tAc100106
tCc>tGc6066
tCc>tTc500502
tCc>tYc6060
tCg>tAg3031
tCg>tGg1011
tCg>tTg390396
tCg>tYg3030
tCt>tAt390396
tCt>tGt100106
tCt>tMt8080
tCt>tTt227022712
tCt>tYt220221
tGc>tAc130136
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280281
tGt>tAt220220
tGt>tCt3021
tGt>tKt5040
tGt>tRt1010
tGt>tTt300305
tTa>tAa9091
tTa>tCa16710166717
tTa>tGa6065
tTa>tWa2020
tTa>tYa9090
tTc>tAc9062
tTc>tCc140146
tTc>tGc160115
tTc>tYc1010
tTg>tAg9097
tTg>tCg5052
tTg>tGg1011
tTg>tWg1010
tTg>tYg1010
tTt>tAt18301388
tTt>tCt400157
tTt>tGt140145
tTt>tKt2020
tTt>tWt1010
tTt>tYt100101
taA>taG1011
taA>taR1011
taC>taA1010
taC>taT22560165732
taC>taY200200
taG>taT1010
taT>taA4040
taT>taC799020813
taT>taG540541
taT>taK4040
taT>taY3030
tcA>tcC860106
tcA>tcG920356
tcA>tcR3030
tcA>tcT3870197
tcA>tcW1010
tcC>tcA530146
tcC>tcG8085
tcC>tcT340018213
tcC>tcY5050
tcG>tcA280227
tcG>tcC8086
tcG>tcT480326
tcT>tcA4130167
tcT>tcC1660316
tcT>tcG220116
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT33101339
tgC>tgY7071
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190192
tgT>tgA3031
tgT>tgC3580336
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800116
ttA>ttG951058844
ttA>ttR4040
ttA>ttT2910177
ttA>ttW1010
ttC>ttA240198
ttC>ttG100106
ttC>ttS2020
ttC>ttT774207066141
ttC>ttY320310
ttG>ttA4340659
ttG>ttC600167
ttG>ttK160160
ttG>ttS1010
ttG>ttT14180128769
ttT>ttA570367
ttT>ttC6400588
ttT>ttG5051
ttT>ttK5051
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: atG>atT