2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set12
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3032
Aaa>Caa280147
Aaa>Gaa290195
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460307
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290127
Aag>Gag280165
Aag>Mag4040
Aag>Rag2020
Aag>Tag13085
Aag>Wag1010
Aat>Cat470168
Aat>Gat1140427
Aat>Mat1010
Aat>Rat5050
Aat>Tat190162
Aat>Wat150150
Aca>Cca7075
Aca>Gca950347
Aca>Rca2020
Aca>Tca330235
Aca>Wca1010
Acc>Ccc1010
Acc>Gcc200107
Acc>Rcc1010
Acc>Tcc9087
Acc>Wcc1010
Acg>Gcg220147
Acg>Rcg2020
Act>Cct17075
Act>Gct1230517
Act>Mct2020
Act>Rct3030
Act>Tct600167
Act>Wct120120
Aga>Cga910127
Aga>Gga110117
Aga>Tga2020
Agc>Ggc400307
Agc>Rgc2020
Agg>Cgg32097
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710712
Agt>Ggt1090477
Agt>Mgt360360
Agt>Rgt2020
Agt>Tgt250137
Agt>Wgt1010
Ata>Cta8080
Ata>Gta1240577
Ata>Rta2020
Ata>Tta200155
Atc>Ctc170127
Atc>Gtc670317
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150157
Atg>Gtg630515
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170127
Atg>Wtg1010
Att>Ctt350147
Att>Gtt50003277
Att>Mtt3030
Att>Rtt6060
Att>Ttt230135
CAT>TTG3032
CAa>ACa1010
CCa>AAa5055
CTt>GGt1010
Caa>Aaa630367
Caa>Gaa620247
Caa>Maa2020
Caa>Saa1010
Caa>Taa260205
Caa>Yaa9080
Cac>Aac13085
Cac>Gac1010
Cac>Tac980977
Cac>Yac5050
Cag>Aag390157
Cag>Gag260127
Cag>Mag3030
Cag>Tag12065
Cag>Yag3030
Cat>Aat17097
Cat>Gat1010
Cat>Mat2020
Cat>Tat17101655
Cat>Yat100100
Cca>Aca250147
Cca>Gca5052
Cca>Mca2020
Cca>Sca1010
Cca>Tca49404767
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340342
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240240
Cct>Act190172
Cct>Gct19097
Cct>Mct5050
Cct>Tct17001617
Cct>Yct6050
Cga>Aga19097
Cga>Yga1010
Cgc>Agc6062
Cgc>Ggc1010
Cgc>Tgc240240
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62087
Cgt>Ggt1010
Cgt>Tgt16701640
Cgt>Ygt4040
Cta>Ata340167
Cta>Gta2020
Cta>Tta82204989
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc19301177
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg1720807
Ctg>Ytg1010
Ctt>Att380312
Ctt>Gtt200105
Ctt>Stt3030
Ctt>Ttt62503737
Ctt>Ytt160160
GAa>CCa3032
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa840517
Gaa>Caa330207
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190187
Gac>Aac29402825
Gac>Cac170175
Gac>Kac3030
Gac>Sac2020
Gac>Tac11601150
Gag>Aag350195
Gag>Cag9097
Gag>Dag1011
Gag>Rag1010
Gag>Tag10095
Gat>Aat730507
Gat>Cat360357
Gat>Kat130120
Gat>Rat3030
Gat>Tat19001785
Gca>Aca24502117
Gca>Cca150107
Gca>Kca4040
Gca>Rca100100
Gca>Tca1060668
Gcc>Acc400307
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160132
Gcg>Acg180137
Gcg>Kcg1010
Gcg>Tcg210212
Gct>Act1650897
Gct>Cct24085
Gct>Kct240220
Gct>Rct8080
Gct>Sct2020
Gct>Tct20001507
Gga>Aga320320
Gga>Cga1647016470
Gga>Rga160160
Gga>Sga100100
Gga>Tga6060
Ggc>Agc350355
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390390
Ggg>Agg8087
Ggg>Tgg1010
Ggt>Agt28102447
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660650
Gta>Ata31502028
Gta>Cta6061
Gta>Kta9080
Gta>Rta1010
Gta>Tta30402997
Gtc>Atc720277
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450454
Gtg>Atg530227
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg11401147
Gtt>Att32701147
Gtt>Ctt450207
Gtt>Ktt100100
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt23202295
TAt>GTt7070
TGc>GAc1011
TTa>AAa1010
TTa>CAa1010
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160150
Tac>Cac490395
Tac>Gac2020
Tac>Yac140140
Tat>Aat9095
Tat>Cat190197
Tat>Gat5052
Tat>Kat1010
Tat>Yat3030
Tca>Aca470147
Tca>Cca640347
Tca>Gca530187
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120117
Tcc>Ccc5050
Tcc>Gcc260127
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13087
Tcg>Gcg10055
Tct>Act420117
Tct>Cct260217
Tct>Gct670187
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14095
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620167
Tta>Cta6010517
Tta>Gta240117
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc890795
Ttc>Gtc8085
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370117
Ttg>Ctg56702068
Ttg>Gtg160155
Ttg>Ytg8080
Ttt>Att17095
Ttt>Ctt23002057
Ttt>Gtt270197
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190117
aAa>aGa1020558
aAa>aRa1010
aAa>aTa19085
aAa>aWa2020
aAc>aCc210115
aAc>aGc510307
aAc>aMc2020
aAc>aRc1010
aAc>aTc8085
aAc>aWc3030
aAg>aCg180127
aAg>aGg22302067
aAg>aMg1010
aAg>aRg5050
aAg>aTg18085
aAg>aWg1010
aAt>aCt1160507
aAt>aGt1170737
aAt>aMt2020
aAt>aRt6060
aAt>aTt9085
aAt>aWt4040
aCa>aAa16401467
aCa>aBa1010
aCa>aGa150107
aCa>aMa3030
aCa>aTa34503337
aCa>aYa210210
aCc>aAc12075
aCc>aGc9087
aCc>aTc2697026638
aCc>aYc6060
aCg>aAg1010
aCg>aGg4042
aCg>aTg27602747
aCg>aYg4040
aCt>aAt720567
aCt>aGt330107
aCt>aSt1010
aCt>aTt69106117
aCt>aYt240240
aGA>aAC2022
aGa>aAa830347
aGa>aCa290247
aGa>aKa4040
aGa>aRa6060
aGa>aSa2020
aGa>aTa460465
aGc>aAc150105
aGc>aCc7075
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190190
aGg>aAg1715017077
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330758
aGt>aCt950417
aGt>aKt110110
aGt>aRt1010
aGt>aSt350350
aGt>aTt15401497
aTa>aAa3030
aTa>aCa920667
aTa>aGa7065
aTa>aYa2020
aTc>aAc1011
aTc>aCc620617
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210210
aTg>aDg1010
aTg>aGg4042
aTg>aKg2020
aTt>aAt7075
aTt>aCt740447
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310197
aaA>aaG76201357
aaA>aaM1010
aaA>aaR6060
aaA>aaT420187
aaA>aaW2020
aaC>aaA130135
aaC>aaG7075
aaC>aaM2020
aaC>aaT128107157
aaC>aaY240220
aaG>aaA6610447
aaG>aaC150150
aaG>aaK4040
aaG>aaR3030
aaG>aaT16801515
aaT>aaA610167
aaT>aaC76101587
aaT>aaG160116
aaT>aaK1010
aaT>aaW3030
aaT>aaY9090
acA>acC1270117
acA>acG20501247
acA>acM2020
acA>acR4040
acA>acT5690277
acA>acW1010
acC>acA1170167
acC>acG10055
acC>acM2020
acC>acT37902077
acC>acY130130
acG>acA1470257
acG>acC6062
acG>acK1010
acG>acR3030
acG>acT950627
acT>acA5240207
acT>acC40601167
acT>acG750257
acT>acW2020
acT>acY7070
agA>agC23085
agA>agG1970307
agA>agM1010
agA>agR7070
agA>agT410137
agC>agA560560
agC>agM4040
agC>agT1797017008
agC>agY2020
agG>agA1841016647
agG>agC1010
agG>agK2020
agG>agR100100
agG>agT290247
agT>agA420117
agT>agC1500287
agT>agG9072
agT>agW1010
agT>agY2020
atA>atC450107
atA>atG180187
atA>atM2020
atA>atR1010
atA>atT3140117
atA>atW1010
atC>atA1080257
atC>atG9055
atC>atM2020
atC>atT58903317
atC>atY4040
atG>atA950927
atG>atC120123
atG>atK9090
atG>atR2020
atG>atT23202145
atT>atA3480137
atT>atC2600347
atT>atG12121212
atT>atW210120
atT>atY3030
cAa>cCa460157
cAa>cGa440347
cAa>cMa5050
cAa>cRa1010
cAa>cTa180185
cAa>cWa1010
cAc>cGc3030
cAg>cCg21065
cAg>cGg240195
cAg>cTg130107
cAg>cWg1010
cAt>cCt1010
cAt>cGt560565
cAt>cMt5040
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210137
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa16501655
cCa>cYa150150
cCc>cAc1011
cCc>cGc2020
cCc>cTc18201820
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290125
cCt>cGt5050
cCt>cTt8126080539
cCt>cYt240240
cGa>cTa3030
cGc>cAc200200
cGc>cTc9090
cGg>cAg6062
cGg>cCg3030
cGt>cAt170170
cGt>cKt1010
cGt>cTt240240
cTa>cAa1010
cTa>cCa9098
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320321
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2020
cTg>cWg1010
cTt>cAt250205
cTt>cCt170152
cTt>cDt1010
cTt>cGt110105
cTt>cWt2020
cTt>cYt9090
caA>caC330197
caA>caG4250457
caA>caM2020
caA>caR5050
caA>caT370167
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT3090987
caC>caY5050
caG>caA4600527
caG>caC250237
caG>caK110110
caG>caR1010
caG>caT3264032116
caT>caA9062
caT>caC35801527
caT>caG9095
caT>caK1010
caT>caY6060
ccA>ccC570157
ccA>ccG970497
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720317
ccA>ccW2020
ccC>ccA450137
ccC>ccG10097
ccC>ccM1010
ccC>ccT2070857
ccC>ccY3030
ccG>ccA520237
ccG>ccC100107
ccG>ccK5050
ccG>ccT14901227
ccT>ccA3490187
ccT>ccC1540497
ccT>ccG700197
ccT>ccW3030
ccT>ccY5050
cgA>cgC5052
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130107
cgC>cgT1030397
cgC>cgY1010
cgG>cgA320137
cgG>cgC9097
cgG>cgR1010
cgG>cgT270167
cgT>cgA650107
cgT>cgC44403737
cgT>cgG16065
cgT>cgY4040
ctA>ctC430107
ctA>ctG980137
ctA>ctR1010
ctA>ctT1610177
ctA>ctW3030
ctC>ctA840127
ctC>ctG580157
ctC>ctM1010
ctC>ctT1656013698
ctC>ctY180180
ctG>ctA1150207
ctG>ctC200107
ctG>ctK2020
ctG>ctT710477
ctT>ctA3310207
ctT>ctC32001037
ctT>ctG1940277
ctT>ctK1010
ctT>ctY3030
gAa>gCa150122
gAa>gGa610545
gAa>gRa2020
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc160127
gAc>gMc2020
gAc>gRc1010
gAc>gTc3030
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4040
gAg>gWg1010
gAt>gCt400157
gAt>gGt6985068488
gAt>gMt1010
gAt>gRt260260
gAt>gTt160153
gAt>gWt2020
gCa>gAa130127
gCa>gGa11065
gCa>gMa1010
gCa>gTa30603025
gCa>gYa160150
gCc>gAc9097
gCc>gGc7075
gCc>gTc840845
gCc>gYc3030
gCg>gAg3032
gCg>gTg220220
gCg>gYg2020
gCt>gAt350205
gCt>gGt690695
gCt>gMt120120
gCt>gSt1010
gCt>gTt85307817
gCt>gYt240240
gGa>gAa200200
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301520
gGc>gAc18801885
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6060
gGg>gAg9092
gGg>gTg1010
gGt>gAt510307
gGt>gCt8082
gGt>gKt430310
gGt>gRt1010
gGt>gTt94008821
gTa>gAa1010
gTa>gCa510257
gTa>gGa5055
gTa>gYa2020
gTc>gAc2020
gTc>gCc750707
gTc>gGc4042
gTc>gKc1010
gTc>gYc3030
gTg>gAg4042
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1010
gTt>gAt210105
gTt>gCt890497
gTt>gGt300207
gTt>gKt400400
gTt>gWt2020
gTt>gYt2020
gaA>gaC680285
gaA>gaG4850637
gaA>gaM1010
gaA>gaR9090
gaA>gaT1260157
gaA>gaW160140
gaC>gaA950737
gaC>gaG5055
gaC>gaM2020
gaC>gaT95204577
gaC>gaY140140
gaG>gaA4230858
gaG>gaC250127
gaG>gaK7070
gaG>gaS1010
gaG>gaT940787
gaT>gaA29601947
gaT>gaC76001797
gaT>gaG540187
gaT>gaW2020
gaT>gaY100100
gcA>gcC770147
gcA>gcG690267
gcA>gcR1010
gcA>gcT4250667
gcA>gcW110110
gcC>gcA1440227
gcC>gcG150107
gcC>gcM2020
gcC>gcS1010
gcC>gcT41501118
gcC>gcY6060
gcG>gcA1280177
gcG>gcC240197
gcG>gcK1010
gcG>gcR2020
gcG>gcT940547
gcT>gcA4790157
gcT>gcC58802967
gcT>gcG690147
gcT>gcS1010
gcT>gcW2020
gcT>gcY9090
ggA>ggC200167
ggA>ggG750427
ggA>ggR1010
ggA>ggT32001317
ggC>ggA580187
ggC>ggG7077
ggC>ggT42501037
ggC>ggY2020
ggG>ggA880317
ggG>ggC150107
ggG>ggT240247
ggT>ggA2660157
ggT>ggC3030427
ggT>ggG460127
ggT>ggW1010
ggT>ggY3030
gtA>gtC760107
gtA>gtG2520727
gtA>gtR3030
gtA>gtT4100157
gtC>gtA1750917
gtC>gtG38097
gtC>gtM1010
gtC>gtT50202177
gtC>gtY7070
gtG>gtA2510697
gtG>gtC1040287
gtG>gtK6060
gtG>gtR3030
gtG>gtT28801297
gtT>gtA3920167
gtT>gtC3530647
gtT>gtG2720177
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc320117
tAc>tWc1010
tAt>tCt1010
tAt>tGt1142011396
tAt>tMt1010
tAt>tRt1010
tAt>tTt260117
tAt>tWt2020
tCa>tGa17075
tCa>tMa1010
tCa>tTa1059010438
tCa>tYa110110
tCc>tAc100107
tCc>tGc6065
tCc>tTc500500
tCc>tYc6060
tCg>tAg3032
tCg>tGg1010
tCg>tTg390395
tCg>tYg3030
tCt>tAt390395
tCt>tGt100105
tCt>tMt8080
tCt>tTt22702278
tCt>tYt220220
tGc>tAc130135
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280280
tGt>tAt220222
tGt>tCt3020
tGt>tKt5040
tGt>tRt1010
tGt>tTt300305
tTa>tAa9092
tTa>tCa1671016679
tTa>tGa6065
tTa>tWa2020
tTa>tYa9090
tTc>tAc9062
tTc>tCc140147
tTc>tGc160115
tTc>tYc1010
tTg>tAg9097
tTg>tCg5053
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt18301387
tTt>tCt400157
tTt>tGt140147
tTt>tKt2020
tTt>tWt1010
tTt>tYt100100
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT2256016577
taC>taY200200
taG>taT1010
taT>taA4040
taT>taC79902087
taT>taG540540
taT>taK4040
taT>taY3030
tcA>tcC860107
tcA>tcG920357
tcA>tcR3030
tcA>tcT3870197
tcA>tcW1010
tcC>tcA530147
tcC>tcG8085
tcC>tcT34001827
tcC>tcY5050
tcG>tcA280227
tcG>tcC8087
tcG>tcT480327
tcT>tcA4130167
tcT>tcC1660317
tcT>tcG220117
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT33101337
tgC>tgY7070
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190190
tgT>tgA3030
tgT>tgC3580337
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800118
ttA>ttG95105887
ttA>ttR4040
ttA>ttT2910177
ttA>ttW1010
ttC>ttA240197
ttC>ttG100107
ttC>ttS2020
ttC>ttT7742070669
ttC>ttY320310
ttG>ttA4340657
ttG>ttC600167
ttG>ttK160160
ttG>ttS1010
ttG>ttT1418012878
ttT>ttA570367
ttT>ttC6400587
ttT>ttG5052
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: atT>atG