2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set182
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1010
AAt>CTt1010
ACa>GAa2020
AaA>CaT3030
Aaa>Caa280140
Aaa>Gaa290190
Aaa>Maa2020
Aaa>Taa14070
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460300
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290120
Aag>Gag280162
Aag>Mag4040
Aag>Rag2020
Aag>Tag13080
Aag>Wag1010
Aat>Cat470160
Aat>Gat1140420
Aat>Mat1011
Aat>Rat5050
Aat>Tat190160
Aat>Wat150150
Aca>Cca7070
Aca>Gca950340
Aca>Rca2021
Aca>Tca330230
Aca>Wca1010
Acc>Ccc1010
Acc>Gcc200100
Acc>Rcc1011
Acc>Tcc9080
Acc>Wcc1010
Acg>Gcg220140
Acg>Rcg2022
Act>Cct17070
Act>Gct1230511
Act>Mct2022
Act>Rct3031
Act>Tct600160
Act>Wct120120
Aga>Cga910120
Aga>Gga110110
Aga>Tga2020
Agc>Ggc400300
Agc>Rgc2020
Agg>Cgg32090
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710710
Agt>Ggt1090470
Agt>Mgt3603619
Agt>Rgt2020
Agt>Tgt250130
Agt>Wgt1010
Ata>Cta8080
Ata>Gta1240572
Ata>Rta2021
Ata>Tta200150
Atc>Ctc170120
Atc>Gtc670310
Atc>Mtc1011
Atc>Ttc3030
Atg>Ctg150150
Atg>Gtg630510
Atg>Mtg3030
Atg>Rtg3031
Atg>Ttg170120
Atg>Wtg1010
Att>Ctt350140
Att>Gtt50003273
Att>Mtt3030
Att>Rtt6061
Att>Ttt230130
CAT>TTG3030
CAa>ACa1010
CCa>AAa5050
CTt>GGt1010
Caa>Aaa630360
Caa>Gaa620240
Caa>Maa2020
Caa>Saa1010
Caa>Taa260200
Caa>Yaa9081
Cac>Aac13080
Cac>Gac1010
Cac>Tac980971
Cac>Yac5050
Cag>Aag390150
Cag>Gag260120
Cag>Mag3031
Cag>Tag12060
Cag>Yag3031
Cat>Aat17090
Cat>Gat1010
Cat>Mat2021
Cat>Tat17101650
Cat>Yat100101
Cca>Aca250141
Cca>Gca5050
Cca>Mca2020
Cca>Sca1010
Cca>Tca49404760
Cca>Yca7071
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340341
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240240
Cct>Act190170
Cct>Gct19090
Cct>Mct5052
Cct>Tct17001610
Cct>Yct6050
Cga>Aga19090
Cga>Yga1010
Cgc>Agc6060
Cgc>Ggc1010
Cgc>Tgc240240
Cgc>Ygc4042
Cgg>Agg20050
Cgg>Tgg5050
Cgt>Agt62080
Cgt>Ggt1010
Cgt>Tgt16701640
Cgt>Ygt4040
Cta>Ata340160
Cta>Gta2020
Cta>Tta82204981
Cta>Yta5051
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc19301172
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg1720800
Ctg>Ytg1010
Ctt>Att380310
Ctt>Gtt200100
Ctt>Stt3031
Ctt>Ttt62503730
Ctt>Ytt160162
GAa>CCa3030
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa840512
Gaa>Caa330201
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190180
Gac>Aac29402823
Gac>Cac170170
Gac>Kac3030
Gac>Sac2020
Gac>Tac11601150
Gag>Aag350190
Gag>Cag9090
Gag>Dag1010
Gag>Rag1010
Gag>Tag10090
Gat>Aat730500
Gat>Cat360350
Gat>Kat130122
Gat>Rat3030
Gat>Tat19001781
Gca>Aca24502110
Gca>Cca150100
Gca>Kca4041
Gca>Rca100100
Gca>Tca1060660
Gcc>Acc400300
Gcc>Ccc10050
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160130
Gcg>Acg180130
Gcg>Kcg1011
Gcg>Tcg210210
Gct>Act1650892
Gct>Cct24080
Gct>Kct240220
Gct>Rct8081
Gct>Sct2020
Gct>Tct20001506
Gga>Aga320321
Gga>Cga1647016471
Gga>Rga160161
Gga>Sga100100
Gga>Tga6060
Ggc>Agc350350
Ggc>Cgc3030
Ggc>Kgc1011
Ggc>Rgc2021
Ggc>Sgc1010
Ggc>Tgc390390
Ggg>Agg8080
Ggg>Tgg1010
Ggt>Agt28102444
Ggt>Cgt4030
Ggt>Kgt7071
Ggt>Rgt100102
Ggt>Tgt660650
Gta>Ata31502020
Gta>Cta6060
Gta>Kta9082
Gta>Rta1010
Gta>Tta30402992
Gtc>Atc720270
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450451
Gtg>Atg530220
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg11401141
Gtt>Att32701140
Gtt>Ctt450200
Gtt>Ktt100101
Gtt>Rtt4041
Gtt>Stt2020
Gtt>Ttt23202290
TAt>GTt7070
TGc>GAc1010
TTa>AAa1010
TTa>CAa1010
TTa>CCa1010
TTg>GGg2020
TTt>CAt2020
TTt>CCt1010
Tac>Aac160150
Tac>Cac490390
Tac>Gac2020
Tac>Yac140140
Tat>Aat9090
Tat>Cat190190
Tat>Gat5050
Tat>Kat1010
Tat>Yat3030
Tca>Aca470140
Tca>Cca640340
Tca>Gca530180
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120110
Tcc>Ccc5050
Tcc>Gcc260120
Tcc>Wcc3031
Tcc>Ycc1010
Tcg>Acg13080
Tcg>Gcg10050
Tct>Act420110
Tct>Cct260210
Tct>Gct670180
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5050
Tgc>Ggc6060
Tgc>Wgc1010
Tgc>Ygc1011
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14090
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620160
Tta>Cta6010510
Tta>Gta240111
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc890791
Ttc>Gtc8080
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370110
Ttg>Ctg56702060
Ttg>Gtg160150
Ttg>Ytg8081
Ttt>Att17090
Ttt>Ctt23002050
Ttt>Gtt270190
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190110
aAa>aGa1020552
aAa>aRa1010
aAa>aTa19080
aAa>aWa2021
aAc>aCc210110
aAc>aGc510301
aAc>aMc2020
aAc>aRc1010
aAc>aTc8080
aAc>aWc3030
aAg>aCg180120
aAg>aGg22302060
aAg>aMg1010
aAg>aRg5050
aAg>aTg18081
aAg>aWg1011
aAt>aCt1160500
aAt>aGt1170731
aAt>aMt2020
aAt>aRt6060
aAt>aTt9080
aAt>aWt4041
aCa>aAa1640146121
aCa>aBa1010
aCa>aGa150100
aCa>aMa3030
aCa>aTa34503335
aCa>aYa210212
aCc>aAc12070
aCc>aGc9080
aCc>aTc2697026639
aCc>aYc6061
aCg>aAg1010
aCg>aGg4040
aCg>aTg27602740
aCg>aYg4040
aCt>aAt720560
aCt>aGt330100
aCt>aSt1010
aCt>aTt69106116
aCt>aYt240241
aGA>aAC2020
aGa>aAa830340
aGa>aCa290240
aGa>aKa4040
aGa>aRa6060
aGa>aSa2021
aGa>aTa460460
aGc>aAc150101
aGc>aCc7070
aGc>aKc1010
aGc>aRc2021
aGc>aSc1010
aGc>aTc190191
aGg>aAg1715017071
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330750
aGt>aCt950410
aGt>aKt110112
aGt>aRt1010
aGt>aSt3503519
aGt>aTt15401490
aTa>aAa3030
aTa>aCa920660
aTa>aGa7060
aTa>aYa2020
aTc>aAc1010
aTc>aCc620610
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210210
aTg>aDg1010
aTg>aGg4040
aTg>aKg2021
aTt>aAt7070
aTt>aCt740440
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310190
aaA>aaG76201351
aaA>aaM1010
aaA>aaR6060
aaA>aaT420180
aaA>aaW2020
aaC>aaA130130
aaC>aaG7070
aaC>aaM2021
aaC>aaT128107153
aaC>aaY240221
aaG>aaA6610440
aaG>aaC150150
aaG>aaK4040
aaG>aaR3033
aaG>aaT16801512
aaT>aaA610160
aaT>aaC76101580
aaT>aaG160110
aaT>aaK1010
aaT>aaW3031
aaT>aaY9092
acA>acC1270110
acA>acG20501240
acA>acM2020
acA>acR4043
acA>acT5690270
acA>acW1010
acC>acA1170160
acC>acG10050
acC>acM2020
acC>acT37902073
acC>acY130131
acG>acA1470250
acG>acC6060
acG>acK1010
acG>acR3030
acG>acT950620
acT>acA5240201
acT>acC40601160
acT>acG750250
acT>acW2021
acT>acY7070
agA>agC23080
agA>agG1970300
agA>agM1011
agA>agR7072
agA>agT410130
agC>agA5605651
agC>agM4044
agC>agT17970170036
agC>agY2020
agG>agA1841016641
agG>agC1010
agG>agK2021
agG>agR100100
agG>agT290240
agT>agA420110
agT>agC1500281
agT>agG9070
agT>agW1010
agT>agY2021
atA>atC450100
atA>atG180180
atA>atM2020
atA>atR1011
atA>atT3140110
atA>atW1010
atC>atA1080250
atC>atG9050
atC>atM2021
atC>atT58903312
atC>atY4040
atG>atA950921
atG>atC120120
atG>atK9090
atG>atR2020
atG>atT23202146
atT>atA3480130
atT>atC2600340
atT>atG120120
atT>atW210120
atT>atY3030
cAa>cCa460150
cAa>cGa440340
cAa>cMa5050
cAa>cRa1011
cAa>cTa180181
cAa>cWa1010
cAc>cGc3030
cAg>cCg21060
cAg>cGg240190
cAg>cTg130100
cAg>cWg1010
cAt>cCt1010
cAt>cGt560560
cAt>cMt5041
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210130
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa16501650
cCa>cYa150150
cCc>cAc1010
cCc>cGc2020
cCc>cTc182182182182
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290120
cCt>cGt5050
cCt>cTt81260805327
cCt>cYt240240
cGa>cTa3030
cGc>cAc200200
cGc>cTc9090
cGg>cAg6060
cGg>cCg3030
cGt>cAt170170
cGt>cKt1010
cGt>cTt240240
cTa>cAa1010
cTa>cCa9090
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320320
cTc>cWc1011
cTc>cYc1010
cTg>cAg5050
cTg>cCg2020
cTg>cGg2020
cTg>cWg1011
cTt>cAt250200
cTt>cCt170151
cTt>cDt1010
cTt>cGt110100
cTt>cWt2020
cTt>cYt9095
caA>caC330190
caA>caG4250452
caA>caM2020
caA>caR5050
caA>caT370160
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT3090981
caC>caY5051
caG>caA4600520
caG>caC250230
caG>caK110113
caG>caR1010
caG>caT32640321114
caT>caA9060
caT>caC35801521
caT>caG9090
caT>caK1010
caT>caY6060
ccA>ccC570150
ccA>ccG970490
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720310
ccA>ccW2021
ccC>ccA450130
ccC>ccG10090
ccC>ccM1010
ccC>ccT2070850
ccC>ccY3030
ccG>ccA520231
ccG>ccC100100
ccG>ccK5050
ccG>ccT14901221
ccT>ccA3490180
ccT>ccC1540490
ccT>ccG700190
ccT>ccW3030
ccT>ccY5050
cgA>cgC5050
cgA>cgG6060
cgA>cgR1010
cgA>cgT26060
cgC>cgA130100
cgC>cgT1030390
cgC>cgY1010
cgG>cgA320130
cgG>cgC9090
cgG>cgR1010
cgG>cgT270160
cgT>cgA650100
cgT>cgC44403731
cgT>cgG16060
cgT>cgY4040
ctA>ctC430100
ctA>ctG980130
ctA>ctR1010
ctA>ctT1610170
ctA>ctW3031
ctC>ctA840120
ctC>ctG580150
ctC>ctM1010
ctC>ctT16560136960
ctC>ctY180184
ctG>ctA1150200
ctG>ctC200100
ctG>ctK2020
ctG>ctT710470
ctT>ctA3310201
ctT>ctC32001030
ctT>ctG1940270
ctT>ctK1010
ctT>ctY3030
gAa>gCa150120
gAa>gGa610540
gAa>gRa2021
gAa>gTa19090
gAa>gWa1010
gAc>gCc130130
gAc>gGc160120
gAc>gMc2021
gAc>gRc1010
gAc>gTc3030
gAg>gCg16060
gAg>gGg120120
gAg>gMg1010
gAg>gTg4040
gAg>gWg1010
gAt>gCt400150
gAt>gGt69850684822
gAt>gMt1010
gAt>gRt260265
gAt>gTt160150
gAt>gWt2020
gCa>gAa130120
gCa>gGa11060
gCa>gMa1011
gCa>gTa30603022
gCa>gYa160152
gCc>gAc9090
gCc>gGc7070
gCc>gTc840843
gCc>gYc3031
gCg>gAg3030
gCg>gTg220220
gCg>gYg2021
gCt>gAt350200
gCt>gGt690690
gCt>gMt120122
gCt>gSt1010
gCt>gTt8530781123
gCt>gYt240242
gGa>gAa200200
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa153015234
gGc>gAc18801880
gGc>gCc1010
gGc>gKc3031
gGc>gRc6060
gGc>gTc6060
gGg>gAg9090
gGg>gTg1010
gGt>gAt510300
gGt>gCt8080
gGt>gKt430310
gGt>gRt1010
gGt>gTt94008827
gTa>gAa1010
gTa>gCa510250
gTa>gGa5050
gTa>gYa2020
gTc>gAc2020
gTc>gCc750700
gTc>gGc4040
gTc>gKc1010
gTc>gYc3030
gTg>gAg4040
gTg>gCg160110
gTg>gGg5050
gTg>gKg1010
gTg>gYg1011
gTt>gAt210100
gTt>gCt890490
gTt>gGt300200
gTt>gKt4004017
gTt>gWt2020
gTt>gYt2020
gaA>gaC680280
gaA>gaG4850634
gaA>gaM1010
gaA>gaR9091
gaA>gaT1260150
gaA>gaW160140
gaC>gaA950730
gaC>gaG5050
gaC>gaM2020
gaC>gaT952045731
gaC>gaY140142
gaG>gaA4230850
gaG>gaC250120
gaG>gaK7072
gaG>gaS1010
gaG>gaT940780
gaT>gaA29601940
gaT>gaC76001793
gaT>gaG540180
gaT>gaW2020
gaT>gaY100100
gcA>gcC770140
gcA>gcG690260
gcA>gcR1010
gcA>gcT4250660
gcA>gcW110114
gcC>gcA1440220
gcC>gcG150100
gcC>gcM2020
gcC>gcS1010
gcC>gcT41501110
gcC>gcY6060
gcG>gcA1280170
gcG>gcC240190
gcG>gcK1010
gcG>gcR2020
gcG>gcT940540
gcT>gcA4790150
gcT>gcC58802960
gcT>gcG690140
gcT>gcS1010
gcT>gcW2020
gcT>gcY9092
ggA>ggC200160
ggA>ggG750420
ggA>ggR1011
ggA>ggT32001310
ggC>ggA580180
ggC>ggG7070
ggC>ggT42501030
ggC>ggY2020
ggG>ggA880310
ggG>ggC150100
ggG>ggT240242
ggT>ggA2660150
ggT>ggC3030421
ggT>ggG460120
ggT>ggW1010
ggT>ggY3031
gtA>gtC760100
gtA>gtG2520720
gtA>gtR3031
gtA>gtT4100150
gtC>gtA1750910
gtC>gtG38090
gtC>gtM1010
gtC>gtT50202175
gtC>gtY7073
gtG>gtA2510690
gtG>gtC1040280
gtG>gtK6061
gtG>gtR3030
gtG>gtT28801294
gtT>gtA3920160
gtT>gtC3530640
gtT>gtG2720170
gtT>gtK1010
gtT>gtY2020
tAc>tCc5050
tAc>tGc210210
tAc>tTc320110
tAc>tWc1011
tAt>tCt1010
tAt>tGt1142011394
tAt>tMt1010
tAt>tRt1010
tAt>tTt260110
tAt>tWt2020
tCa>tGa17070
tCa>tMa1011
tCa>tTa10590104339
tCa>tYa110110
tCc>tAc100100
tCc>tGc6060
tCc>tTc500502
tCc>tYc6060
tCg>tAg3030
tCg>tGg1010
tCg>tTg390390
tCg>tYg3031
tCt>tAt390390
tCt>tGt100100
tCt>tMt8080
tCt>tTt22702272
tCt>tYt220225
tGc>tAc130130
tGc>tTc10090
tGg>tCg2020
tGg>tKg2020
tGg>tTg280282
tGt>tAt220220
tGt>tCt3020
tGt>tKt5041
tGt>tRt1011
tGt>tTt300300
tTa>tAa9090
tTa>tCa16710166735
tTa>tGa6060
tTa>tWa2021
tTa>tYa9090
tTc>tAc9060
tTc>tCc140140
tTc>tGc160110
tTc>tYc1010
tTg>tAg9090
tTg>tCg5050
tTg>tGg1011
tTg>tWg1010
tTg>tYg1010
tTt>tAt183013831
tTt>tCt400150
tTt>tGt140140
tTt>tKt2020
tTt>tWt1011
tTt>tYt100104
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657155
taC>taY200201
taG>taT1010
taT>taA4040
taT>taC79902080
taT>taG540540
taT>taK4040
taT>taY3030
tcA>tcC860100
tcA>tcG920351
tcA>tcR3031
tcA>tcT3870191
tcA>tcW1010
tcC>tcA530140
tcC>tcG8080
tcC>tcT34001821
tcC>tcY5050
tcG>tcA280220
tcG>tcC8080
tcG>tcT480320
tcT>tcA4130160
tcT>tcC1660312
tcT>tcG220110
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT33101335
tgC>tgY7070
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2022
tgG>tgT190191
tgT>tgA3030
tgT>tgC3580333
tgT>tgG2020
tgT>tgK3031
tgT>tgY3031
ttA>ttC800110
ttA>ttG95105888
ttA>ttR4040
ttA>ttT2910170
ttA>ttW1010
ttC>ttA240190
ttC>ttG100102
ttC>ttS2022
ttC>ttT77420706631
ttC>ttY320316
ttG>ttA4340650
ttG>ttC600160
ttG>ttK160161
ttG>ttS1010
ttG>ttT141801287127
ttT>ttA570363
ttT>ttC6400580
ttT>ttG5050
ttT>ttK5052
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: cCc>cTc