2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set8053
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801411
Aaa>Gaa2901919
Aaa>Maa2022
Aaa>Taa14076
Aaa>Waa1010
Aac>Cac7077
Aac>Gac4603022
Aac>Mac2022
Aac>Rac1011
Aac>Tac10083
Aac>Wac1011
Aag>Cag2901210
Aag>Gag2801610
Aag>Mag4043
Aag>Rag2021
Aag>Tag13088
Aag>Wag1011
Aat>Cat4701610
Aat>Gat11404238
Aat>Mat1011
Aat>Rat5055
Aat>Tat1901612
Aat>Wat1501514
Aca>Cca7077
Aca>Gca9503428
Aca>Rca2020
Aca>Tca3302321
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200109
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1010
Acg>Gcg2201413
Acg>Rcg2020
Act>Cct17077
Act>Gct12305147
Act>Mct2020
Act>Rct3032
Act>Tct6001614
Act>Wct1201212
Aga>Cga9101210
Aga>Gga1101110
Aga>Tga2022
Agc>Ggc4003028
Agc>Rgc2021
Agg>Cgg32098
Agg>Ggg3032
Agg>Rgg1011
Agg>Tgg4042
Agt>Cgt7107166
Agt>Ggt10904737
Agt>Mgt3603612
Agt>Rgt2022
Agt>Tgt2501312
Agt>Wgt1010
Ata>Cta8088
Ata>Gta12405723
Ata>Rta2020
Ata>Tta200158
Atc>Ctc170129
Atc>Gtc6703129
Atc>Mtc1010
Atc>Ttc3033
Atg>Ctg150159
Atg>Gtg6305136
Atg>Mtg3032
Atg>Rtg3032
Atg>Ttg1701212
Atg>Wtg1010
Att>Ctt3501413
Att>Gtt500032749
Att>Mtt3031
Att>Rtt6062
Att>Ttt2301312
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303632
Caa>Gaa6202422
Caa>Maa2021
Caa>Saa1011
Caa>Taa2602016
Caa>Yaa9083
Cac>Aac13088
Cac>Gac1011
Cac>Tac9809760
Cac>Yac5051
Cag>Aag3901510
Cag>Gag2601211
Cag>Mag3032
Cag>Tag12066
Cag>Yag3031
Cat>Aat17099
Cat>Gat1011
Cat>Mat2020
Cat>Tat1710165104
Cat>Yat100106
Cca>Aca2501410
Cca>Gca5055
Cca>Mca2022
Cca>Sca1010
Cca>Tca4940476119
Cca>Yca7071
Ccc>Acc8085
Ccc>Mcc1010
Ccc>Tcc3403425
Ccg>Acg2022
Ccg>Gcg1011
Ccg>Tcg240248
Cct>Act1901714
Cct>Gct19099
Cct>Mct5053
Cct>Tct1700161121
Cct>Yct6054
Cga>Aga19098
Cga>Yga1010
Cgc>Agc6066
Cgc>Ggc1011
Cgc>Tgc2402417
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1011
Cgt>Tgt167016448
Cgt>Ygt4044
Cta>Ata3401614
Cta>Gta2021
Cta>Tta8220498410
Cta>Yta5052
Ctc>Atc3033
Ctc>Gtc1011
Ctc>Mtc8088
Ctc>Ttc193011778
Ctc>Ytc6064
Ctg>Atg7076
Ctg>Gtg8082
Ctg>Mtg1011
Ctg>Ttg17208041
Ctg>Ytg1011
Ctt>Att3803130
Ctt>Gtt200106
Ctt>Stt3030
Ctt>Ttt6250373301
Ctt>Ytt160168
GAa>CCa3032
GCt>AGt2022
GGa>TTa2022
GGt>TTt2022
GTg>CAg1011
GTt>CAt5052
Gaa>Aaa8405135
Gaa>Caa3302015
Gaa>Kaa3030
Gaa>Raa8085
Gaa>Saa1011
Gaa>Taa1901815
Gac>Aac294028239
Gac>Cac170178
Gac>Kac3031
Gac>Sac2022
Gac>Tac116011582
Gag>Aag3501918
Gag>Cag9099
Gag>Dag1011
Gag>Rag1010
Gag>Tag10099
Gat>Aat7305045
Gat>Cat3603528
Gat>Kat130128
Gat>Rat3030
Gat>Tat1900178147
Gca>Aca245021130
Gca>Cca150109
Gca>Kca4042
Gca>Rca100100
Gca>Tca10606654
Gcc>Acc4003026
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4043
Gcc>Tcc1601311
Gcg>Acg1801312
Gcg>Kcg1010
Gcg>Tcg2102120
Gct>Act16508969
Gct>Cct24086
Gct>Kct2402218
Gct>Rct8085
Gct>Sct2021
Gct>Tct2000150121
Gga>Aga3203225
Gga>Cga1647016471636
Gga>Rga1601614
Gga>Sga100107
Gga>Tga6064
Ggc>Agc3503531
Ggc>Cgc3033
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc3903932
Ggg>Agg8088
Ggg>Tgg1011
Ggt>Agt2810244217
Ggt>Cgt4033
Ggt>Kgt7072
Ggt>Rgt100104
Ggt>Tgt6606538
Gta>Ata315020241
Gta>Cta6065
Gta>Kta9083
Gta>Rta1011
Gta>Tta3040299251
Gtc>Atc7202718
Gtc>Ctc6066
Gtc>Ktc1011
Gtc>Rtc2021
Gtc>Stc2022
Gtc>Ttc4504527
Gtg>Atg5302220
Gtg>Ctg1890189178
Gtg>Stg1010
Gtg>Ttg1140114105
Gtt>Att327011454
Gtt>Ctt4502015
Gtt>Ktt100102
Gtt>Rtt4042
Gtt>Stt2021
Gtt>Ttt2320229195
TAt>GTt7074
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2022
TTt>CAt2021
TTt>CCt1011
Tac>Aac1601511
Tac>Cac4903927
Tac>Gac2022
Tac>Yac140142
Tat>Aat9099
Tat>Cat1901915
Tat>Gat5055
Tat>Kat1011
Tat>Yat3033
Tca>Aca4701413
Tca>Cca6403414
Tca>Gca5301816
Tca>Kca1011
Tca>Wca1010
Tca>Yca4044
Tcc>Acc1201110
Tcc>Ccc5055
Tcc>Gcc2601210
Tcc>Wcc3032
Tcc>Ycc1011
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act4201110
Tct>Cct2602116
Tct>Gct6701817
Tct>Wct1011
Tga>Aga1011
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6066
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5055
Tgg>Cgg1011
Tgg>Wgg2022
Tgt>Agt14097
Tgt>Cgt1011
Tgt>Ggt1011
Tgt>Kgt1011
Tgt>Ygt3031
Tta>Ata6201615
Tta>Cta60105133
Tta>Gta2401110
Tta>Kta1010
Tta>Yta5054
Ttc>Atc3032
Ttc>Ctc8907975
Ttc>Gtc8087
Ttc>Ktc1011
Ttc>Ytc3033
Ttg>Atg3701110
Ttg>Ctg567020642
Ttg>Gtg160157
Ttg>Ytg8082
Ttt>Att17097
Ttt>Ctt2300205197
Ttt>Gtt2701915
Ttt>Ktt1010
Ttt>Wtt2022
Ttt>Ytt3031
aAa>aCa1901110
aAa>aGa10205545
aAa>aRa1010
aAa>aTa19088
aAa>aWa2021
aAc>aCc210119
aAc>aGc5103028
aAc>aMc2022
aAc>aRc1010
aAc>aTc8087
aAc>aWc3033
aAg>aCg1801210
aAg>aGg2230206164
aAg>aMg1011
aAg>aRg5054
aAg>aTg18087
aAg>aWg1010
aAt>aCt11605035
aAt>aGt11707342
aAt>aMt2022
aAt>aRt6063
aAt>aTt9088
aAt>aWt4041
aCa>aAa164014625
aCa>aBa1011
aCa>aGa1501010
aCa>aMa3033
aCa>aTa3450333257
aCa>aYa2102113
aCc>aAc12077
aCc>aGc9088
aCc>aTc2697026632640
aCc>aYc6061
aCg>aAg1011
aCg>aGg4043
aCg>aTg2760274253
aCg>aYg4041
aCt>aAt7205655
aCt>aGt330109
aCt>aSt1011
aCt>aTt6910611468
aCt>aYt2402412
aGA>aAC2022
aGa>aAa8303428
aGa>aCa2902422
aGa>aKa4041
aGa>aRa6065
aGa>aSa2020
aGa>aTa4604643
aGc>aAc150108
aGc>aCc7077
aGc>aKc1010
aGc>aRc2021
aGc>aSc1011
aGc>aTc1901916
aGg>aAg1715017071686
aGg>aCg1010
aGg>aKg2022
aGg>aRg9097
aGg>aTg4044
aGt>aAt13307525
aGt>aCt9504132
aGt>aKt110116
aGt>aRt1011
aGt>aSt3503511
aGt>aTt154014957
aTa>aAa3033
aTa>aCa9206659
aTa>aGa7066
aTa>aYa2021
aTc>aAc1011
aTc>aCc6206154
aTc>aGc1010
aTc>aYc2021
aTg>aAg4043
aTg>aCg2102115
aTg>aDg1011
aTg>aGg4044
aTg>aKg2021
aTt>aAt7077
aTt>aCt7404426
aTt>aGt4042
aTt>aWt1010
aTt>aYt6062
aaA>aaC3101919
aaA>aaG762013588
aaA>aaM1011
aaA>aaR6065
aaA>aaT4201814
aaA>aaW2020
aaC>aaA1301311
aaC>aaG7076
aaC>aaM2020
aaC>aaT12810715626
aaC>aaY2402212
aaG>aaA66104437
aaG>aaC1501512
aaG>aaK4042
aaG>aaR3030
aaG>aaT1680151133
aaT>aaA6101613
aaT>aaC7610158131
aaT>aaG1601111
aaT>aaK1010
aaT>aaW3032
aaT>aaY9093
acA>acC12701110
acA>acG2050124112
acA>acM2021
acA>acR4041
acA>acT56902720
acA>acW1011
acC>acA11701615
acC>acG10055
acC>acM2022
acC>acT3790207186
acC>acY130139
acG>acA14702518
acG>acC6064
acG>acK1011
acG>acR3032
acG>acT9506240
acT>acA52402017
acT>acC406011683
acT>acG7502522
acT>acW2021
acT>acY7076
agA>agC23086
agA>agG19703025
agA>agM1010
agA>agR7073
agA>agT4101310
agC>agA560568
agC>agM4040
agC>agT1797017001268
agC>agY2021
agG>agA1841016641650
agG>agC1011
agG>agK2020
agG>agR100108
agG>agT2902421
agT>agA420119
agT>agC15002818
agT>agG9074
agT>agW1011
agT>agY2021
atA>atC450109
atA>atG1801817
atA>atM2022
atA>atR1010
atA>atT31401110
atA>atW1010
atC>atA10802510
atC>atG9055
atC>atM2021
atC>atT5890331218
atC>atY4043
atG>atA9509290
atG>atC120127
atG>atK9097
atG>atR2021
atG>atT2320214145
atT>atA34801311
atT>atC26003423
atT>atG120129
atT>atW2101212
atT>atY3033
cAa>cCa4601514
cAa>cGa4403425
cAa>cMa5054
cAa>cRa1010
cAa>cTa1801813
cAa>cWa1011
cAc>cGc3032
cAg>cCg21066
cAg>cGg2401917
cAg>cTg130109
cAg>cWg1010
cAt>cCt1011
cAt>cGt5605612
cAt>cMt5040
cAt>cRt3030
cAt>cTt4041
cAt>cWt1011
cCa>cAa2101312
cCa>cGa2011
cCa>cMa1011
cCa>cSa1011
cCa>cTa1650165124
cCa>cYa1501513
cCc>cAc1011
cCc>cGc2021
cCc>cTc182018227
cCc>cYc5051
cCg>cTg7076
cCg>cYg1011
cCt>cAt290127
cCt>cGt5051
cCt>cTt8126812680538053
cCt>cYt240249
cGa>cTa3030
cGc>cAc2002015
cGc>cTc9098
cGg>cAg6065
cGg>cCg3031
cGt>cAt1701712
cGt>cKt1010
cGt>cTt2402423
cTa>cAa1010
cTa>cCa9099
cTa>cWa1011
cTa>cYa2020
cTc>cAc3032
cTc>cCc3203231
cTc>cWc1010
cTc>cYc1011
cTg>cAg5055
cTg>cCg2022
cTg>cGg2022
cTg>cWg1010
cTt>cAt2502018
cTt>cCt1701512
cTt>cDt1011
cTt>cGt110109
cTt>cWt2022
cTt>cYt9092
caA>caC3301917
caA>caG42504534
caA>caM2022
caA>caR5051
caA>caT3701615
caA>caW1011
caC>caA1011
caC>caG1011
caC>caT30909841
caC>caY5051
caG>caA46005236
caG>caC2502321
caG>caK110116
caG>caR1011
caG>caT3264032113183
caT>caA9065
caT>caC358015227
caT>caG9099
caT>caK1010
caT>caY6064
ccA>ccC5701514
ccA>ccG9704942
ccA>ccM1010
ccA>ccR5053
ccA>ccT37203125
ccA>ccW2020
ccC>ccA4501310
ccC>ccG10098
ccC>ccM1011
ccC>ccT20708559
ccC>ccY3031
ccG>ccA5202316
ccG>ccC100109
ccG>ccK5054
ccG>ccT149012296
ccT>ccA34901813
ccT>ccC15404941
ccT>ccG7001915
ccT>ccW3032
ccT>ccY5055
cgA>cgC5055
cgA>cgG6065
cgA>cgR1010
cgA>cgT26066
cgC>cgA130109
cgC>cgT10303932
cgC>cgY1011
cgG>cgA3201312
cgG>cgC9098
cgG>cgR1011
cgG>cgT2701614
cgT>cgA650109
cgT>cgC444037355
cgT>cgG16065
cgT>cgY4042
ctA>ctC430109
ctA>ctG9801312
ctA>ctR1010
ctA>ctT16101715
ctA>ctW3031
ctC>ctA8401211
ctC>ctG5801511
ctC>ctM1011
ctC>ctT1656013691255
ctC>ctY180187
ctG>ctA11502019
ctG>ctC200109
ctG>ctK2022
ctG>ctT7104744
ctT>ctA33102014
ctT>ctC320010369
ctT>ctG19402726
ctT>ctK1011
ctT>ctY3032
gAa>gCa150129
gAa>gGa6105434
gAa>gRa2021
gAa>gTa19099
gAa>gWa1010
gAc>gCc1301310
gAc>gGc1601210
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120128
gAg>gMg1011
gAg>gTg4043
gAg>gWg1011
gAt>gCt4001512
gAt>gGt6985068486765
gAt>gMt1011
gAt>gRt2602611
gAt>gTt1601511
gAt>gWt2022
gCa>gAa1301211
gCa>gGa11066
gCa>gMa1010
gCa>gTa3060302262
gCa>gYa160158
gCc>gAc9099
gCc>gGc7077
gCc>gTc8408473
gCc>gYc3030
gCg>gAg3033
gCg>gTg220228
gCg>gYg2021
gCt>gAt3502017
gCt>gGt6906969
gCt>gMt120127
gCt>gSt1011
gCt>gTt8530781512
gCt>gYt2402415
gGa>gAa2002019
gGa>gKa1401414
gGa>gRa1010
gGa>gSa1010
gGa>gTa153015225
gGc>gAc188018824
gGc>gCc1011
gGc>gKc3031
gGc>gRc6061
gGc>gTc6064
gGg>gAg9098
gGg>gTg1010
gGt>gAt5103023
gGt>gCt8086
gGt>gKt4303116
gGt>gRt1011
gGt>gTt9400882108
gTa>gAa1011
gTa>gCa5102515
gTa>gGa5055
gTa>gYa2022
gTc>gAc2022
gTc>gCc7507069
gTc>gGc4043
gTc>gKc1010
gTc>gYc3033
gTg>gAg4044
gTg>gCg1601110
gTg>gGg5055
gTg>gKg1011
gTg>gYg1010
gTt>gAt210108
gTt>gCt8904940
gTt>gGt3002017
gTt>gKt4004016
gTt>gWt2021
gTt>gYt2022
gaA>gaC680289
gaA>gaG48506340
gaA>gaM1011
gaA>gaR9095
gaA>gaT12601512
gaA>gaW1601414
gaC>gaA9507370
gaC>gaG5055
gaC>gaM2022
gaC>gaT9520457255
gaC>gaY140148
gaG>gaA42308560
gaG>gaC2501210
gaG>gaK7071
gaG>gaS1011
gaG>gaT9407864
gaT>gaA2960194188
gaT>gaC7600179139
gaT>gaG5401813
gaT>gaW2021
gaT>gaY100107
gcA>gcC7701411
gcA>gcG6902622
gcA>gcR1010
gcA>gcT42506655
gcA>gcW110114
gcC>gcA14402218
gcC>gcG150109
gcC>gcM2021
gcC>gcS1011
gcC>gcT415011177
gcC>gcY6065
gcG>gcA12801713
gcG>gcC2401917
gcG>gcK1010
gcG>gcR2022
gcG>gcT9405431
gcT>gcA47901514
gcT>gcC5880296261
gcT>gcG6901412
gcT>gcS1010
gcT>gcW2021
gcT>gcY9095
ggA>ggC200168
ggA>ggG7504223
ggA>ggR1010
ggA>ggT3200131125
ggC>ggA5801816
ggC>ggG7077
ggC>ggT425010362
ggC>ggY2020
ggG>ggA8803125
ggG>ggC150109
ggG>ggT2402419
ggT>ggA26601513
ggT>ggC30304228
ggT>ggG4601210
ggT>ggW1011
ggT>ggY3031
gtA>gtC760109
gtA>gtG25207251
gtA>gtR3032
gtA>gtT41001510
gtC>gtA17509190
gtC>gtG38098
gtC>gtM1010
gtC>gtT5020217148
gtC>gtY7071
gtG>gtA25106968
gtG>gtC10402811
gtG>gtK6065
gtG>gtR3032
gtG>gtT288012986
gtT>gtA39201613
gtT>gtC35306449
gtT>gtG27201716
gtT>gtK1010
gtT>gtY2022
tAc>tCc5055
tAc>tGc2102119
tAc>tTc3201110
tAc>tWc1010
tAt>tCt1011
tAt>tGt1142011391099
tAt>tMt1010
tAt>tRt1011
tAt>tTt2601110
tAt>tWt2020
tCa>tGa17077
tCa>tMa1010
tCa>tTa105901043807
tCa>tYa110118
tCc>tAc100108
tCc>tGc6066
tCc>tTc5005034
tCc>tYc6063
tCg>tAg3033
tCg>tGg1010
tCg>tTg3903936
tCg>tYg3030
tCt>tAt3903938
tCt>tGt100106
tCt>tMt8087
tCt>tTt2270227175
tCt>tYt220229
tGc>tAc1301313
tGc>tTc10096
tGg>tCg2022
tGg>tKg2022
tGg>tTg2802821
tGt>tAt2202217
tGt>tCt3022
tGt>tKt5041
tGt>tRt1010
tGt>tTt3003020
tTa>tAa9098
tTa>tCa1671016671255
tTa>tGa6065
tTa>tWa2021
tTa>tYa9094
tTc>tAc9063
tTc>tCc1401411
tTc>tGc1601110
tTc>tYc1010
tTg>tAg9099
tTg>tCg5055
tTg>tGg1010
tTg>tWg1010
tTg>tYg1011
tTt>tAt183013815
tTt>tCt4001512
tTt>tGt1401410
tTt>tKt2022
tTt>tWt1010
tTt>tYt100104
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657623
taC>taY2002010
taG>taT1010
taT>taA4042
taT>taC7990208183
taT>taG5405447
taT>taK4044
taT>taY3033
tcA>tcC860109
tcA>tcG9203533
tcA>tcR3032
tcA>tcT38701915
tcA>tcW1010
tcC>tcA5301413
tcC>tcG8087
tcC>tcT3400182140
tcC>tcY5054
tcG>tcA2802219
tcG>tcC8088
tcG>tcT4803220
tcT>tcA41301612
tcT>tcC16603122
tcT>tcG220119
tcT>tcY2022
tgA>tgG2020
tgC>tgA1011
tgC>tgT3310133103
tgC>tgY7072
tgG>tgA2021
tgG>tgC1011
tgG>tgK1010
tgG>tgR2020
tgG>tgT1901915
tgT>tgA3032
tgT>tgC35803320
tgT>tgG2022
tgT>tgK3032
tgT>tgY3032
ttA>ttC8001110
ttA>ttG9510588543
ttA>ttR4041
ttA>ttT29101713
ttA>ttW1011
ttC>ttA2401911
ttC>ttG100108
ttC>ttS2020
ttC>ttT7742070666818
ttC>ttY3203113
ttG>ttA43406555
ttG>ttC6001612
ttG>ttK160166
ttG>ttS1010
ttG>ttT141801287170
ttT>ttA5703616
ttT>ttC64005846
ttT>ttG5054
ttT>ttK5051
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: cCt>cTt