2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set6
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1010
AAt>CTt1010
ACa>GAa2020
AaA>CaT3030
Aaa>Caa280142
Aaa>Gaa290192
Aaa>Maa2020
Aaa>Taa14072
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460302
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290122
Aag>Gag280162
Aag>Mag4040
Aag>Rag2020
Aag>Tag13082
Aag>Wag1010
Aat>Cat470162
Aat>Gat1140422
Aat>Mat1010
Aat>Rat5050
Aat>Tat190160
Aat>Wat150150
Aca>Cca7071
Aca>Gca950342
Aca>Rca2020
Aca>Tca330232
Aca>Wca1010
Acc>Ccc1010
Acc>Gcc200102
Acc>Rcc1010
Acc>Tcc9082
Acc>Wcc1010
Acg>Gcg220142
Acg>Rcg2020
Act>Cct17072
Act>Gct1230512
Act>Mct2020
Act>Rct3030
Act>Tct600162
Act>Wct120120
Aga>Cga910122
Aga>Gga110112
Aga>Tga2020
Agc>Ggc400302
Agc>Rgc2020
Agg>Cgg32092
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710710
Agt>Ggt1090472
Agt>Mgt360360
Agt>Rgt2020
Agt>Tgt250132
Agt>Wgt1010
Ata>Cta8080
Ata>Gta1240572
Ata>Rta2020
Ata>Tta200152
Atc>Ctc170122
Atc>Gtc670312
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150152
Atg>Gtg630512
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170122
Atg>Wtg1010
Att>Ctt350142
Att>Gtt50003272
Att>Mtt3030
Att>Rtt6060
Att>Ttt230132
CAT>TTG3030
CAa>ACa1010
CCa>AAa5052
CTt>GGt1010
Caa>Aaa630362
Caa>Gaa620242
Caa>Maa2020
Caa>Saa1010
Caa>Taa260202
Caa>Yaa9080
Cac>Aac13082
Cac>Gac1010
Cac>Tac980972
Cac>Yac5050
Cag>Aag390152
Cag>Gag260122
Cag>Mag3030
Cag>Tag12062
Cag>Yag3030
Cat>Aat17092
Cat>Gat1010
Cat>Mat2020
Cat>Tat17101652
Cat>Yat100100
Cca>Aca250142
Cca>Gca5050
Cca>Mca2020
Cca>Sca1010
Cca>Tca49404762
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340340
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240240
Cct>Act190170
Cct>Gct19092
Cct>Mct5050
Cct>Tct17001612
Cct>Yct6050
Cga>Aga19092
Cga>Yga1010
Cgc>Agc6060
Cgc>Ggc1010
Cgc>Tgc240240
Cgc>Ygc4040
Cgg>Agg20052
Cgg>Tgg5052
Cgt>Agt62082
Cgt>Ggt1010
Cgt>Tgt16701640
Cgt>Ygt4040
Cta>Ata340162
Cta>Gta2020
Cta>Tta82204982
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc19301172
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg1720802
Ctg>Ytg1010
Ctt>Att380310
Ctt>Gtt200102
Ctt>Stt3030
Ctt>Ttt62503732
Ctt>Ytt160160
GAa>CCa3030
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa840512
Gaa>Caa330202
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190182
Gac>Aac29402822
Gac>Cac170172
Gac>Kac3030
Gac>Sac2020
Gac>Tac11601150
Gag>Aag350192
Gag>Cag9092
Gag>Dag1010
Gag>Rag1010
Gag>Tag10092
Gat>Aat730502
Gat>Cat360352
Gat>Kat130120
Gat>Rat3030
Gat>Tat19001782
Gca>Aca24502112
Gca>Cca150102
Gca>Kca4040
Gca>Rca100100
Gca>Tca1060662
Gcc>Acc400302
Gcc>Ccc10052
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160130
Gcg>Acg180132
Gcg>Kcg1010
Gcg>Tcg210210
Gct>Act1650892
Gct>Cct24082
Gct>Kct240220
Gct>Rct8080
Gct>Sct2020
Gct>Tct20001502
Gga>Aga320320
Gga>Cga1647016470
Gga>Rga160160
Gga>Sga100100
Gga>Tga6060
Ggc>Agc350352
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390390
Ggg>Agg8082
Ggg>Tgg1010
Ggt>Agt28102442
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660650
Gta>Ata31502022
Gta>Cta6061
Gta>Kta9080
Gta>Rta1010
Gta>Tta30402992
Gtc>Atc720272
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450450
Gtg>Atg530222
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg11401142
Gtt>Att32701142
Gtt>Ctt450202
Gtt>Ktt100100
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt23202292
TAt>GTt7070
TGc>GAc1010
TTa>AAa1010
TTa>CAa1010
TTa>CCa1010
TTg>GGg2020
TTt>CAt2020
TTt>CCt1010
Tac>Aac160150
Tac>Cac490392
Tac>Gac2020
Tac>Yac140140
Tat>Aat9092
Tat>Cat190192
Tat>Gat5050
Tat>Kat1010
Tat>Yat3030
Tca>Aca470142
Tca>Cca640342
Tca>Gca530182
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120112
Tcc>Ccc5050
Tcc>Gcc260122
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13082
Tcg>Gcg10052
Tct>Act420112
Tct>Cct260212
Tct>Gct670182
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5052
Tgc>Ggc6062
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14092
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620162
Tta>Cta6010512
Tta>Gta240112
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc890792
Ttc>Gtc8082
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370112
Ttg>Ctg56702062
Ttg>Gtg160152
Ttg>Ytg8080
Ttt>Att17092
Ttt>Ctt23002052
Ttt>Gtt270192
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190112
aAa>aGa1020552
aAa>aRa1010
aAa>aTa19082
aAa>aWa2020
aAc>aCc210112
aAc>aGc510302
aAc>aMc2020
aAc>aRc1010
aAc>aTc8082
aAc>aWc3030
aAg>aCg180122
aAg>aGg22302062
aAg>aMg1010
aAg>aRg5050
aAg>aTg18082
aAg>aWg1010
aAt>aCt1160502
aAt>aGt1170732
aAt>aMt2020
aAt>aRt6060
aAt>aTt9082
aAt>aWt4040
aCa>aAa16401462
aCa>aBa1010
aCa>aGa150102
aCa>aMa3030
aCa>aTa34503332
aCa>aYa210210
aCc>aAc12072
aCc>aGc9082
aCc>aTc2697026632
aCc>aYc6060
aCg>aAg1010
aCg>aGg4040
aCg>aTg27602742
aCg>aYg4040
aCt>aAt720562
aCt>aGt330102
aCt>aSt1010
aCt>aTt69106112
aCt>aYt240240
aGA>aAC2020
aGa>aAa830342
aGa>aCa290242
aGa>aKa4040
aGa>aRa6060
aGa>aSa2020
aGa>aTa460462
aGc>aAc150102
aGc>aCc7072
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190190
aGg>aAg1715017072
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330752
aGt>aCt950412
aGt>aKt110110
aGt>aRt1010
aGt>aSt350350
aGt>aTt15401492
aTa>aAa3030
aTa>aCa920662
aTa>aGa7062
aTa>aYa2020
aTc>aAc1010
aTc>aCc620612
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210210
aTg>aDg1010
aTg>aGg4040
aTg>aKg2020
aTt>aAt7072
aTt>aCt740442
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310192
aaA>aaG76201352
aaA>aaM1010
aaA>aaR6060
aaA>aaT420182
aaA>aaW2020
aaC>aaA130132
aaC>aaG7072
aaC>aaM2020
aaC>aaT128107152
aaC>aaY240220
aaG>aaA6610442
aaG>aaC150150
aaG>aaK4040
aaG>aaR3030
aaG>aaT16801513
aaT>aaA610162
aaT>aaC76101582
aaT>aaG160112
aaT>aaK1010
aaT>aaW3030
aaT>aaY9090
acA>acC1270112
acA>acG20501242
acA>acM2020
acA>acR4040
acA>acT5690272
acA>acW1010
acC>acA1170162
acC>acG10052
acC>acM2020
acC>acT37902072
acC>acY130130
acG>acA1470252
acG>acC6060
acG>acK1010
acG>acR3030
acG>acT950622
acT>acA5240202
acT>acC40601162
acT>acG750252
acT>acW2020
acT>acY7070
agA>agC23082
agA>agG1970302
agA>agM1010
agA>agR7070
agA>agT410132
agC>agA560560
agC>agM4040
agC>agT1797017002
agC>agY2020
agG>agA1841016642
agG>agC1010
agG>agK2020
agG>agR100100
agG>agT290242
agT>agA420112
agT>agC1500282
agT>agG9070
agT>agW1010
agT>agY2020
atA>atC450102
atA>atG180182
atA>atM2020
atA>atR1010
atA>atT3140112
atA>atW1010
atC>atA1080252
atC>atG9052
atC>atM2020
atC>atT58903312
atC>atY4040
atG>atA950922
atG>atC120120
atG>atK9090
atG>atR2020
atG>atT23202142
atT>atA3480132
atT>atC2600342
atT>atG120122
atT>atW210120
atT>atY3030
cAa>cCa460152
cAa>cGa440342
cAa>cMa5050
cAa>cRa1010
cAa>cTa180182
cAa>cWa1010
cAc>cGc3030
cAg>cCg21062
cAg>cGg240192
cAg>cTg130102
cAg>cWg1010
cAt>cCt1010
cAt>cGt560562
cAt>cMt5040
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210132
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa16501653
cCa>cYa150150
cCc>cAc1011
cCc>cGc2020
cCc>cTc18201820
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290122
cCt>cGt5050
cCt>cTt8126080535
cCt>cYt240240
cGa>cTa3030
cGc>cAc200200
cGc>cTc9090
cGg>cAg6666
cGg>cCg3030
cGt>cAt170170
cGt>cKt1010
cGt>cTt240240
cTa>cAa1010
cTa>cCa9092
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320321
cTc>cWc1010
cTc>cYc1010
cTg>cAg5052
cTg>cCg2020
cTg>cGg2020
cTg>cWg1010
cTt>cAt250202
cTt>cCt170150
cTt>cDt1010
cTt>cGt110102
cTt>cWt2020
cTt>cYt9090
caA>caC330192
caA>caG4250452
caA>caM2020
caA>caR5050
caA>caT370162
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT3090982
caC>caY5050
caG>caA4600522
caG>caC250232
caG>caK110110
caG>caR1010
caG>caT3264032112
caT>caA9060
caT>caC35801522
caT>caG9092
caT>caK1010
caT>caY6060
ccA>ccC570152
ccA>ccG970492
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720312
ccA>ccW2020
ccC>ccA450132
ccC>ccG10092
ccC>ccM1010
ccC>ccT2070852
ccC>ccY3030
ccG>ccA520232
ccG>ccC100102
ccG>ccK5050
ccG>ccT14901222
ccT>ccA3490182
ccT>ccC1540492
ccT>ccG700192
ccT>ccW3030
ccT>ccY5050
cgA>cgC5050
cgA>cgG6062
cgA>cgR1010
cgA>cgT26062
cgC>cgA130102
cgC>cgT1030392
cgC>cgY1010
cgG>cgA320132
cgG>cgC9092
cgG>cgR1010
cgG>cgT270162
cgT>cgA650102
cgT>cgC44403732
cgT>cgG16062
cgT>cgY4040
ctA>ctC430102
ctA>ctG980132
ctA>ctR1010
ctA>ctT1610172
ctA>ctW3030
ctC>ctA840122
ctC>ctG580152
ctC>ctM1010
ctC>ctT1656013692
ctC>ctY180180
ctG>ctA1150202
ctG>ctC200102
ctG>ctK2020
ctG>ctT710472
ctT>ctA3310202
ctT>ctC32001032
ctT>ctG1940272
ctT>ctK1010
ctT>ctY3030
gAa>gCa150120
gAa>gGa610542
gAa>gRa2020
gAa>gTa19092
gAa>gWa1010
gAc>gCc130132
gAc>gGc160122
gAc>gMc2020
gAc>gRc1010
gAc>gTc3030
gAg>gCg16062
gAg>gGg120122
gAg>gMg1010
gAg>gTg4040
gAg>gWg1010
gAt>gCt400152
gAt>gGt6985068485
gAt>gMt1010
gAt>gRt260260
gAt>gTt160151
gAt>gWt2020
gCa>gAa130122
gCa>gGa11062
gCa>gMa1010
gCa>gTa30603022
gCa>gYa160150
gCc>gAc9092
gCc>gGc7072
gCc>gTc840842
gCc>gYc3030
gCg>gAg3030
gCg>gTg220220
gCg>gYg2020
gCt>gAt350202
gCt>gGt690692
gCt>gMt120120
gCt>gSt1010
gCt>gTt85307812
gCt>gYt240240
gGa>gAa200200
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301520
gGc>gAc18801882
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6060
gGg>gAg9090
gGg>gTg1010
gGt>gAt510302
gGt>gCt8080
gGt>gKt430310
gGt>gRt1010
gGt>gTt94008821
gTa>gAa1010
gTa>gCa510252
gTa>gGa5052
gTa>gYa2020
gTc>gAc2020
gTc>gCc750702
gTc>gGc4040
gTc>gKc1010
gTc>gYc3030
gTg>gAg4040
gTg>gCg160112
gTg>gGg5052
gTg>gKg1010
gTg>gYg1010
gTt>gAt210102
gTt>gCt890492
gTt>gGt300202
gTt>gKt400400
gTt>gWt2020
gTt>gYt2020
gaA>gaC680282
gaA>gaG4850632
gaA>gaM1010
gaA>gaR9090
gaA>gaT1260152
gaA>gaW160140
gaC>gaA950732
gaC>gaG5052
gaC>gaM2020
gaC>gaT95204572
gaC>gaY140140
gaG>gaA4230852
gaG>gaC250122
gaG>gaK7070
gaG>gaS1010
gaG>gaT940782
gaT>gaA29601942
gaT>gaC76001792
gaT>gaG540182
gaT>gaW2020
gaT>gaY100100
gcA>gcC770142
gcA>gcG690262
gcA>gcR1010
gcA>gcT4250662
gcA>gcW110110
gcC>gcA1440222
gcC>gcG150102
gcC>gcM2020
gcC>gcS1010
gcC>gcT41501112
gcC>gcY6060
gcG>gcA1280172
gcG>gcC240192
gcG>gcK1010
gcG>gcR2020
gcG>gcT940542
gcT>gcA4790152
gcT>gcC58802962
gcT>gcG690142
gcT>gcS1010
gcT>gcW2020
gcT>gcY9090
ggA>ggC200162
ggA>ggG750422
ggA>ggR1010
ggA>ggT32001312
ggC>ggA580182
ggC>ggG7072
ggC>ggT42501032
ggC>ggY2020
ggG>ggA880312
ggG>ggC150102
ggG>ggT240242
ggT>ggA2660152
ggT>ggC3030422
ggT>ggG460122
ggT>ggW1010
ggT>ggY3030
gtA>gtC760102
gtA>gtG2520722
gtA>gtR3030
gtA>gtT4100152
gtC>gtA1750912
gtC>gtG38092
gtC>gtM1010
gtC>gtT50202174
gtC>gtY7070
gtG>gtA2510692
gtG>gtC1040282
gtG>gtK6060
gtG>gtR3030
gtG>gtT28801292
gtT>gtA3920162
gtT>gtC3530642
gtT>gtG2720172
gtT>gtK1010
gtT>gtY2020
tAc>tCc5052
tAc>tGc210210
tAc>tTc320112
tAc>tWc1010
tAt>tCt1010
tAt>tGt1142011392
tAt>tMt1010
tAt>tRt1010
tAt>tTt260112
tAt>tWt2020
tCa>tGa17072
tCa>tMa1010
tCa>tTa1059010432
tCa>tYa110110
tCc>tAc100102
tCc>tGc6062
tCc>tTc500500
tCc>tYc6060
tCg>tAg3030
tCg>tGg1010
tCg>tTg390392
tCg>tYg3030
tCt>tAt390392
tCt>tGt100102
tCt>tMt8080
tCt>tTt22702272
tCt>tYt220220
tGc>tAc130132
tGc>tTc10092
tGg>tCg2020
tGg>tKg2020
tGg>tTg280280
tGt>tAt220222
tGt>tCt3020
tGt>tKt5040
tGt>tRt1010
tGt>tTt300302
tTa>tAa9090
tTa>tCa1671016672
tTa>tGa6062
tTa>tWa2020
tTa>tYa9090
tTc>tAc9060
tTc>tCc140142
tTc>tGc160112
tTc>tYc1010
tTg>tAg9092
tTg>tCg5050
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt18301382
tTt>tCt400152
tTt>tGt140142
tTt>tKt2020
tTt>tWt1010
tTt>tYt100100
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT2256016572
taC>taY200200
taG>taT1010
taT>taA4040
taT>taC79902082
taT>taG540540
taT>taK4040
taT>taY3030
tcA>tcC860102
tcA>tcG920352
tcA>tcR3030
tcA>tcT3870192
tcA>tcW1010
tcC>tcA530142
tcC>tcG8082
tcC>tcT34001822
tcC>tcY5050
tcG>tcA280222
tcG>tcC8082
tcG>tcT480322
tcT>tcA4130162
tcT>tcC1660312
tcT>tcG220112
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT33101332
tgC>tgY7070
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190190
tgT>tgA3030
tgT>tgC3580332
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800112
ttA>ttG95105884
ttA>ttR4040
ttA>ttT2910172
ttA>ttW1010
ttC>ttA240192
ttC>ttG100102
ttC>ttS2020
ttC>ttT7742070665
ttC>ttY320310
ttG>ttA4340652
ttG>ttC600162
ttG>ttK160160
ttG>ttS1010
ttG>ttT1418012873
ttT>ttA570362
ttT>ttC6400582
ttT>ttG5050
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: cGg>cAg