2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set3211
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1010
AAt>CTt1010
ACa>GAa2020
AaA>CaT3030
Aaa>Caa280148
Aaa>Gaa2901911
Aaa>Maa2020
Aaa>Taa14076
Aaa>Waa1010
Aac>Cac7071
Aac>Gac460308
Aac>Mac2021
Aac>Rac1010
Aac>Tac10081
Aac>Wac1011
Aag>Cag290127
Aag>Gag280169
Aag>Mag4040
Aag>Rag2020
Aag>Tag13086
Aag>Wag1010
Aat>Cat470167
Aat>Gat11404212
Aat>Mat1010
Aat>Rat5050
Aat>Tat190165
Aat>Wat150150
Aca>Cca7073
Aca>Gca9503415
Aca>Rca2020
Aca>Tca330238
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200105
Acc>Rcc1010
Acc>Tcc9085
Acc>Wcc1010
Acg>Gcg220145
Acg>Rcg2020
Act>Cct17075
Act>Gct12305116
Act>Mct2021
Act>Rct3031
Act>Tct600167
Act>Wct120120
Aga>Cga910127
Aga>Gga110115
Aga>Tga2020
Agc>Ggc4003014
Agc>Rgc2021
Agg>Cgg32095
Agg>Ggg3031
Agg>Rgg1011
Agg>Tgg4041
Agt>Cgt7107147
Agt>Ggt10904715
Agt>Mgt360369
Agt>Rgt2020
Agt>Tgt250135
Agt>Wgt1010
Ata>Cta8080
Ata>Gta12405716
Ata>Rta2020
Ata>Tta200156
Atc>Ctc170126
Atc>Gtc6703117
Atc>Mtc1010
Atc>Ttc3031
Atg>Ctg150155
Atg>Gtg6305130
Atg>Mtg3031
Atg>Rtg3031
Atg>Ttg170128
Atg>Wtg1010
Att>Ctt350147
Att>Gtt500032715
Att>Mtt3031
Att>Rtt6063
Att>Ttt230135
CAT>TTG3030
CAa>ACa1010
CCa>AAa5055
CTt>GGt1010
Caa>Aaa630368
Caa>Gaa6202413
Caa>Maa2020
Caa>Saa1011
Caa>Taa260209
Caa>Yaa9080
Cac>Aac13086
Cac>Gac1011
Cac>Tac9809722
Cac>Yac5050
Cag>Aag390157
Cag>Gag260126
Cag>Mag3032
Cag>Tag12066
Cag>Yag3031
Cat>Aat17096
Cat>Gat1011
Cat>Mat2020
Cat>Tat171016540
Cat>Yat100100
Cca>Aca250145
Cca>Gca5052
Cca>Mca2022
Cca>Sca1010
Cca>Tca494047664
Cca>Yca7071
Ccc>Acc8083
Ccc>Mcc1010
Ccc>Tcc340342
Ccg>Acg2022
Ccg>Gcg1010
Ccg>Tcg240241
Cct>Act190174
Cct>Gct19096
Cct>Mct5051
Cct>Tct170016152
Cct>Yct6052
Cga>Aga19095
Cga>Yga1010
Cgc>Agc6064
Cgc>Ggc1010
Cgc>Tgc240245
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62085
Cgt>Ggt1010
Cgt>Tgt167016415
Cgt>Ygt4042
Cta>Ata340168
Cta>Gta2020
Cta>Tta8220498344
Cta>Yta5051
Ctc>Atc3030
Ctc>Gtc1011
Ctc>Mtc8080
Ctc>Ttc193011751
Ctc>Ytc6061
Ctg>Atg7071
Ctg>Gtg8081
Ctg>Mtg1010
Ctg>Ttg17208019
Ctg>Ytg1010
Ctt>Att380314
Ctt>Gtt200105
Ctt>Stt3030
Ctt>Ttt6250373143
Ctt>Ytt160162
GAa>CCa3030
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1011
GTt>CAt5051
Gaa>Aaa8405115
Gaa>Caa330209
Gaa>Kaa3030
Gaa>Raa8082
Gaa>Saa1010
Gaa>Taa190189
Gac>Aac294028211
Gac>Cac170176
Gac>Kac3031
Gac>Sac2020
Gac>Tac116011567
Gag>Aag350199
Gag>Cag9095
Gag>Dag1011
Gag>Rag1010
Gag>Tag10097
Gat>Aat7305012
Gat>Cat3603522
Gat>Kat130121
Gat>Rat3030
Gat>Tat190017840
Gca>Aca245021118
Gca>Cca150106
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606625
Gcc>Acc4003013
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4042
Gcc>Tcc160133
Gcg>Acg180137
Gcg>Kcg1010
Gcg>Tcg2102115
Gct>Act16508940
Gct>Cct24086
Gct>Kct240223
Gct>Rct8082
Gct>Sct2021
Gct>Tct200015036
Gga>Aga320327
Gga>Cga16470164731
Gga>Rga160168
Gga>Sga100101
Gga>Tga6061
Ggc>Agc3503522
Ggc>Cgc3032
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc3903911
Ggg>Agg8085
Ggg>Tgg1011
Ggt>Agt281024460
Ggt>Cgt4032
Ggt>Kgt7071
Ggt>Rgt100102
Ggt>Tgt6606519
Gta>Ata315020215
Gta>Cta6061
Gta>Kta9082
Gta>Rta1010
Gta>Tta304029928
Gtc>Atc720276
Gtc>Ctc6062
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450454
Gtg>Atg530229
Gtg>Ctg18901893
Gtg>Stg1010
Gtg>Ttg114011467
Gtt>Att327011421
Gtt>Ctt4502011
Gtt>Ktt100101
Gtt>Rtt4040
Gtt>Stt2021
Gtt>Ttt232022972
TAt>GTt7070
TGc>GAc1010
TTa>AAa1010
TTa>CAa1010
TTa>CCa1010
TTg>GGg2021
TTt>CAt2021
TTt>CCt1010
Tac>Aac160159
Tac>Cac4903918
Tac>Gac2022
Tac>Yac140141
Tat>Aat9096
Tat>Cat190199
Tat>Gat5052
Tat>Kat1011
Tat>Yat3031
Tca>Aca4701410
Tca>Cca640347
Tca>Gca530188
Tca>Kca1010
Tca>Wca1010
Tca>Yca4042
Tcc>Acc120116
Tcc>Ccc5053
Tcc>Gcc260126
Tcc>Wcc3031
Tcc>Ycc1010
Tcg>Acg13085
Tcg>Gcg10055
Tct>Act420116
Tct>Cct2602111
Tct>Gct6701810
Tct>Wct1011
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6066
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5051
Tgg>Cgg1011
Tgg>Wgg2020
Tgt>Agt14097
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620169
Tta>Cta60105115
Tta>Gta240117
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3031
Ttc>Ctc8907970
Ttc>Gtc8086
Ttc>Ktc1011
Ttc>Ytc3033
Ttg>Atg370115
Ttg>Ctg567020611
Ttg>Gtg160156
Ttg>Ytg8082
Ttt>Att17096
Ttt>Ctt230020510
Ttt>Gtt2701910
Ttt>Ktt1010
Ttt>Wtt2022
Ttt>Ytt3031
aAa>aCa190117
aAa>aGa10205522
aAa>aRa1010
aAa>aTa19088
aAa>aWa2020
aAc>aCc210118
aAc>aGc5103022
aAc>aMc2022
aAc>aRc1010
aAc>aTc8087
aAc>aWc3031
aAg>aCg180125
aAg>aGg223020633
aAg>aMg1010
aAg>aRg5051
aAg>aTg18087
aAg>aWg1010
aAt>aCt11605018
aAt>aGt11707317
aAt>aMt2021
aAt>aRt6061
aAt>aTt9088
aAt>aWt4040
aCa>aAa164014616
aCa>aBa1011
aCa>aGa150107
aCa>aMa3032
aCa>aTa345033391
aCa>aYa210211
aCc>aAc12076
aCc>aGc9085
aCc>aTc2697026632600
aCc>aYc6060
aCg>aAg1011
aCg>aGg4040
aCg>aTg276027412
aCg>aYg4040
aCt>aAt7205628
aCt>aGt330106
aCt>aSt1010
aCt>aTt6910611210
aCt>aYt240244
aGA>aAC2020
aGa>aAa8303421
aGa>aCa2902417
aGa>aKa4040
aGa>aRa6060
aGa>aSa2020
aGa>aTa4604614
aGc>aAc150107
aGc>aCc7077
aGc>aKc1010
aGc>aRc2021
aGc>aSc1010
aGc>aTc1901915
aGg>aAg17150170775
aGg>aCg1010
aGg>aKg2020
aGg>aRg9091
aGg>aTg4042
aGt>aAt13307511
aGt>aCt950416
aGt>aKt110113
aGt>aRt1011
aGt>aSt350358
aGt>aTt154014935
aTa>aAa3030
aTa>aCa9206613
aTa>aGa7066
aTa>aYa2021
aTc>aAc1010
aTc>aCc6206112
aTc>aGc1010
aTc>aYc2020
aTg>aAg4043
aTg>aCg210213
aTg>aDg1011
aTg>aGg4040
aTg>aKg2020
aTt>aAt7076
aTt>aCt7404412
aTt>aGt4041
aTt>aWt1010
aTt>aYt6062
aaA>aaC310196
aaA>aaG762013542
aaA>aaM1010
aaA>aaR6062
aaA>aaT420189
aaA>aaW2020
aaC>aaA130135
aaC>aaG7076
aaC>aaM2020
aaC>aaT1281071597
aaC>aaY240223
aaG>aaA66104420
aaG>aaC150157
aaG>aaK4040
aaG>aaR3031
aaG>aaT168015146
aaT>aaA610167
aaT>aaC761015820
aaT>aaG160119
aaT>aaK1010
aaT>aaW3031
aaT>aaY9092
acA>acC1270116
acA>acG205012418
acA>acM2020
acA>acR4041
acA>acT56902712
acA>acW1010
acC>acA1170169
acC>acG10055
acC>acM2022
acC>acT379020750
acC>acY130137
acG>acA1470258
acG>acC6061
acG>acK1010
acG>acR3031
acG>acT9506219
acT>acA52402010
acT>acC406011635
acT>acG7502517
acT>acW2020
acT>acY7074
agA>agC23086
agA>agG19703010
agA>agM1010
agA>agR7072
agA>agT410136
agC>agA560568
agC>agM4040
agC>agT17970170028
agC>agY2020
agG>agA18410166440
agG>agC1011
agG>agK2020
agG>agR100101
agG>agT2902411
agT>agA420115
agT>agC15002815
agT>agG9071
agT>agW1010
agT>agY2021
atA>atC450106
atA>atG180189
atA>atM2020
atA>atR1010
atA>atT3140116
atA>atW1010
atC>atA1080255
atC>atG9055
atC>atM2020
atC>atT589033181
atC>atY4041
atG>atA9509215
atG>atC120123
atG>atK9091
atG>atR2020
atG>atT232021437
atT>atA3480138
atT>atC26003414
atT>atG120126
atT>atW210120
atT>atY3032
cAa>cCa460157
cAa>cGa440347
cAa>cMa5050
cAa>cRa1010
cAa>cTa1801812
cAa>cWa1011
cAc>cGc3030
cAg>cCg21066
cAg>cGg2401913
cAg>cTg130105
cAg>cWg1010
cAt>cCt1011
cAt>cGt560567
cAt>cMt5041
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210136
cCa>cGa2011
cCa>cMa1011
cCa>cSa1010
cCa>cTa165016535
cCa>cYa150153
cCc>cAc1011
cCc>cGc2021
cCc>cTc182018214
cCc>cYc5051
cCg>cTg7074
cCg>cYg1010
cCt>cAt290125
cCt>cGt5051
cCt>cTt8126080533183
cCt>cYt240246
cGa>cTa3030
cGc>cAc200207
cGc>cTc9092
cGg>cAg6062
cGg>cCg3030
cGt>cAt170177
cGt>cKt1010
cGt>cTt2402411
cTa>cAa1010
cTa>cCa9096
cTa>cWa1010
cTa>cYa2020
cTc>cAc3031
cTc>cCc320323
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2022
cTg>cWg1010
cTt>cAt2502016
cTt>cCt170154
cTt>cDt1011
cTt>cGt110106
cTt>cWt2020
cTt>cYt9092
caA>caC330196
caA>caG42504519
caA>caM2022
caA>caR5050
caA>caT3701612
caA>caW1011
caC>caA1010
caC>caG1010
caC>caT30909823
caC>caY5050
caG>caA4600529
caG>caC250237
caG>caK110112
caG>caR1010
caG>caT3264326432113211
caT>caA9060
caT>caC358015216
caT>caG9097
caT>caK1010
caT>caY6061
ccA>ccC570157
ccA>ccG9704915
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720319
ccA>ccW2020
ccC>ccA450136
ccC>ccG10095
ccC>ccM1011
ccC>ccT20708528
ccC>ccY3030
ccG>ccA520239
ccG>ccC100106
ccG>ccK5051
ccG>ccT149012219
ccT>ccA3490189
ccT>ccC15404932
ccT>ccG7001911
ccT>ccW3032
ccT>ccY5051
cgA>cgC5050
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130105
cgC>cgT10303916
cgC>cgY1011
cgG>cgA320137
cgG>cgC9095
cgG>cgR1010
cgG>cgT270168
cgT>cgA650106
cgT>cgC444037334
cgT>cgG16065
cgT>cgY4042
ctA>ctC430106
ctA>ctG980136
ctA>ctR1010
ctA>ctT1610177
ctA>ctW3030
ctC>ctA840128
ctC>ctG580156
ctC>ctM1010
ctC>ctT16560136966
ctC>ctY180184
ctG>ctA1150209
ctG>ctC200106
ctG>ctK2020
ctG>ctT7104724
ctT>ctA3310208
ctT>ctC320010339
ctT>ctG1940277
ctT>ctK1010
ctT>ctY3030
gAa>gCa150124
gAa>gGa6105430
gAa>gRa2020
gAa>gTa19095
gAa>gWa1010
gAc>gCc130135
gAc>gGc160125
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120126
gAg>gMg1011
gAg>gTg4041
gAg>gWg1010
gAt>gCt400159
gAt>gGt6985068483175
gAt>gMt1011
gAt>gRt260262
gAt>gTt160157
gAt>gWt2020
gCa>gAa130126
gCa>gGa11066
gCa>gMa1010
gCa>gTa3060302190
gCa>gYa160154
gCc>gAc9096
gCc>gGc7076
gCc>gTc8408437
gCc>gYc3030
gCg>gAg3030
gCg>gTg220225
gCg>gYg2020
gCt>gAt3502015
gCt>gGt690695
gCt>gMt120123
gCt>gSt1010
gCt>gTt8530781253
gCt>gYt240246
gGa>gAa200203
gGa>gKa140148
gGa>gRa1010
gGa>gSa1010
gGa>gTa153015215
gGc>gAc188018816
gGc>gCc1011
gGc>gKc3030
gGc>gRc6060
gGc>gTc6062
gGg>gAg9090
gGg>gTg1010
gGt>gAt5103012
gGt>gCt8082
gGt>gKt430319
gGt>gRt1011
gGt>gTt940088256
gTa>gAa1010
gTa>gCa510257
gTa>gGa5055
gTa>gYa2022
gTc>gAc2022
gTc>gCc7507065
gTc>gGc4040
gTc>gKc1010
gTc>gYc3032
gTg>gAg4040
gTg>gCg160115
gTg>gGg5055
gTg>gKg1011
gTg>gYg1010
gTt>gAt210108
gTt>gCt8904910
gTt>gGt300205
gTt>gKt400409
gTt>gWt2020
gTt>gYt2020
gaA>gaC680286
gaA>gaG48506317
gaA>gaM1011
gaA>gaR9091
gaA>gaT1260156
gaA>gaW160141
gaC>gaA950737
gaC>gaG5055
gaC>gaM2020
gaC>gaT9520457122
gaC>gaY140141
gaG>gaA42308516
gaG>gaC250127
gaG>gaK7073
gaG>gaS1010
gaG>gaT9407825
gaT>gaA29601949
gaT>gaC760017944
gaT>gaG540186
gaT>gaW2021
gaT>gaY100104
gcA>gcC770146
gcA>gcG6902612
gcA>gcR1010
gcA>gcT4250667
gcA>gcW110114
gcC>gcA1440227
gcC>gcG150106
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011129
gcC>gcY6061
gcG>gcA1280179
gcG>gcC240195
gcG>gcK1010
gcG>gcR2020
gcG>gcT9405415
gcT>gcA47901510
gcT>gcC588029657
gcT>gcG690147
gcT>gcS1010
gcT>gcW2021
gcT>gcY9093
ggA>ggC200165
ggA>ggG750429
ggA>ggR1011
ggA>ggT320013112
ggC>ggA5801812
ggC>ggG7075
ggC>ggT425010329
ggC>ggY2020
ggG>ggA8803116
ggG>ggC150105
ggG>ggT2402412
ggT>ggA26601510
ggT>ggC30304217
ggT>ggG460127
ggT>ggW1011
ggT>ggY3030
gtA>gtC760106
gtA>gtG25207217
gtA>gtR3030
gtA>gtT4100156
gtC>gtA17509187
gtC>gtG38095
gtC>gtM1010
gtC>gtT502021753
gtC>gtY7072
gtG>gtA25106941
gtG>gtC1040286
gtG>gtK6062
gtG>gtR3031
gtG>gtT288012947
gtT>gtA3920167
gtT>gtC35306411
gtT>gtG2720176
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210212
tAc>tTc320117
tAc>tWc1011
tAt>tCt1011
tAt>tGt11420113920
tAt>tMt1010
tAt>tRt1011
tAt>tTt260116
tAt>tWt2020
tCa>tGa17077
tCa>tMa1010
tCa>tTa105901043540
tCa>tYa110112
tCc>tAc100105
tCc>tGc6066
tCc>tTc500505
tCc>tYc6060
tCg>tAg3030
tCg>tGg1010
tCg>tTg3903918
tCg>tYg3031
tCt>tAt3903938
tCt>tGt100106
tCt>tMt8081
tCt>tTt227022761
tCt>tYt220222
tGc>tAc130136
tGc>tTc10095
tGg>tCg2020
tGg>tKg2021
tGg>tTg280285
tGt>tAt220223
tGt>tCt3021
tGt>tKt5040
tGt>tRt1011
tGt>tTt3003013
tTa>tAa9094
tTa>tCa16710166720
tTa>tGa6065
tTa>tWa2020
tTa>tYa9091
tTc>tAc9060
tTc>tCc140148
tTc>tGc160117
tTc>tYc1010
tTg>tAg9096
tTg>tCg5052
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt18301388
tTt>tCt400157
tTt>tGt140146
tTt>tKt2022
tTt>tWt1010
tTt>tYt100104
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657376
taC>taY200205
taG>taT1010
taT>taA4041
taT>taC799020823
taT>taG540541
taT>taK4044
taT>taY3031
tcA>tcC860106
tcA>tcG9203510
tcA>tcR3031
tcA>tcT3870199
tcA>tcW1010
tcC>tcA530148
tcC>tcG8087
tcC>tcT340018279
tcC>tcY5051
tcG>tcA2802211
tcG>tcC8085
tcG>tcT480328
tcT>tcA4130167
tcT>tcC16603112
tcT>tcG220115
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT331013349
tgC>tgY7071
tgG>tgA2021
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190196
tgT>tgA3030
tgT>tgC3580338
tgT>tgG2020
tgT>tgK3032
tgT>tgY3031
ttA>ttC800116
ttA>ttG951058825
ttA>ttR4040
ttA>ttT2910177
ttA>ttW1010
ttC>ttA240197
ttC>ttG100105
ttC>ttS2021
ttC>ttT7742070663144
ttC>ttY320316
ttG>ttA43406521
ttG>ttC600169
ttG>ttK160163
ttG>ttS1010
ttG>ttT14180128771
ttT>ttA570368
ttT>ttC64005823
ttT>ttG5050
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: caG>caT