2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set1369
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801411
Aaa>Gaa290199
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1010
Aac>Cac7071
Aac>Gac4603011
Aac>Mac2020
Aac>Rac1010
Aac>Tac10081
Aac>Wac1011
Aag>Cag290129
Aag>Gag280168
Aag>Mag4041
Aag>Rag2020
Aag>Tag13086
Aag>Wag1010
Aat>Cat4701610
Aat>Gat11404211
Aat>Mat1011
Aat>Rat5050
Aat>Tat190164
Aat>Wat150151
Aca>Cca7076
Aca>Gca9503416
Aca>Rca2021
Aca>Tca330237
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200108
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1011
Acg>Gcg2201410
Acg>Rcg2021
Act>Cct17075
Act>Gct12305119
Act>Mct2022
Act>Rct3031
Act>Tct600169
Act>Wct120120
Aga>Cga9101211
Aga>Gga110118
Aga>Tga2020
Agc>Ggc4003018
Agc>Rgc2020
Agg>Cgg32099
Agg>Ggg3030
Agg>Rgg1011
Agg>Tgg4040
Agt>Cgt710717
Agt>Ggt10904711
Agt>Mgt360369
Agt>Rgt2020
Agt>Tgt250138
Agt>Wgt1010
Ata>Cta8080
Ata>Gta12405710
Ata>Rta2020
Ata>Tta200155
Atc>Ctc1701210
Atc>Gtc6703117
Atc>Mtc1011
Atc>Ttc3031
Atg>Ctg150158
Atg>Gtg630519
Atg>Mtg3031
Atg>Rtg3031
Atg>Ttg1701210
Atg>Wtg1010
Att>Ctt3501411
Att>Gtt500032715
Att>Mtt3031
Att>Rtt6061
Att>Ttt230137
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303611
Caa>Gaa6202410
Caa>Maa2020
Caa>Saa1010
Caa>Taa260209
Caa>Yaa9082
Cac>Aac13087
Cac>Gac1010
Cac>Tac9809714
Cac>Yac5050
Cag>Aag390158
Cag>Gag260129
Cag>Mag3031
Cag>Tag12065
Cag>Yag3030
Cat>Aat17099
Cat>Gat1011
Cat>Mat2020
Cat>Tat171016520
Cat>Yat100101
Cca>Aca250149
Cca>Gca5053
Cca>Mca2020
Cca>Sca1011
Cca>Tca494047625
Cca>Yca7071
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340347
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240243
Cct>Act190178
Cct>Gct19099
Cct>Mct5051
Cct>Tct170016124
Cct>Yct6050
Cga>Aga19099
Cga>Yga1010
Cgc>Agc6062
Cgc>Ggc1010
Cgc>Tgc240241
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1010
Cgt>Tgt167016413
Cgt>Ygt4041
Cta>Ata340169
Cta>Gta2022
Cta>Tta822049827
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc193011711
Ctc>Ytc6060
Ctg>Atg7074
Ctg>Gtg8081
Ctg>Mtg1010
Ctg>Ttg17208015
Ctg>Ytg1010
Ctt>Att3803117
Ctt>Gtt200105
Ctt>Stt3031
Ctt>Ttt625037338
Ctt>Ytt160163
GAa>CCa3033
GCt>AGt2020
GGa>TTa2022
GGt>TTt2020
GTg>CAg1010
GTt>CAt5051
Gaa>Aaa8405114
Gaa>Caa330209
Gaa>Kaa3031
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa1901810
Gac>Aac294028223
Gac>Cac170176
Gac>Kac3031
Gac>Sac2020
Gac>Tac11601154
Gag>Aag3501914
Gag>Cag9098
Gag>Dag1010
Gag>Rag1010
Gag>Tag10097
Gat>Aat7305011
Gat>Cat360359
Gat>Kat130122
Gat>Rat3030
Gat>Tat190017820
Gca>Aca245021115
Gca>Cca1501010
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606621
Gcc>Acc4003016
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160133
Gcg>Acg1801312
Gcg>Kcg1010
Gcg>Tcg210214
Gct>Act16508918
Gct>Cct24085
Gct>Kct240221
Gct>Rct8081
Gct>Sct2020
Gct>Tct200015033
Gga>Aga320329
Gga>Cga164701647115
Gga>Rga160162
Gga>Sga100100
Gga>Tga6061
Ggc>Agc350359
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1011
Ggc>Tgc390398
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt281024428
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660656
Gta>Ata315020220
Gta>Cta6062
Gta>Kta9082
Gta>Rta1010
Gta>Tta304029918
Gtc>Atc7202710
Gtc>Ctc6062
Gtc>Ktc1010
Gtc>Rtc2021
Gtc>Stc2020
Gtc>Ttc450459
Gtg>Atg5302215
Gtg>Ctg18901891
Gtg>Stg1010
Gtg>Ttg114011410
Gtt>Att327011423
Gtt>Ctt4502012
Gtt>Ktt100102
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt232022938
TAt>GTt7071
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160152
Tac>Cac490397
Tac>Gac2020
Tac>Yac140140
Tat>Aat9097
Tat>Cat1901910
Tat>Gat5053
Tat>Kat1010
Tat>Yat3030
Tca>Aca4701410
Tca>Cca6403411
Tca>Gca530189
Tca>Kca1011
Tca>Wca1010
Tca>Yca4041
Tcc>Acc120119
Tcc>Ccc5053
Tcc>Gcc2601210
Tcc>Wcc3031
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420119
Tct>Cct2602111
Tct>Gct6701811
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5051
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14096
Tgt>Cgt1011
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata6201610
Tta>Cta60105110
Tta>Gta2401110
Tta>Kta1010
Tta>Yta5051
Ttc>Atc3031
Ttc>Ctc890799
Ttc>Gtc8085
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370119
Ttg>Ctg567020614
Ttg>Gtg160158
Ttg>Ytg8083
Ttt>Att17095
Ttt>Ctt230020513
Ttt>Gtt270199
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190119
aAa>aGa10205521
aAa>aRa1010
aAa>aTa19086
aAa>aWa2020
aAc>aCc210118
aAc>aGc5103012
aAc>aMc2021
aAc>aRc1010
aAc>aTc8086
aAc>aWc3030
aAg>aCg180129
aAg>aGg223020655
aAg>aMg1010
aAg>aRg5050
aAg>aTg18086
aAg>aWg1010
aAt>aCt11605012
aAt>aGt11707314
aAt>aMt2021
aAt>aRt6060
aAt>aTt9085
aAt>aWt4040
aCa>aAa164014672
aCa>aBa1010
aCa>aGa150108
aCa>aMa3030
aCa>aTa345033332
aCa>aYa210214
aCc>aAc12075
aCc>aGc9088
aCc>aTc26970266348
aCc>aYc6062
aCg>aAg1011
aCg>aGg4044
aCg>aTg276027413
aCg>aYg4040
aCt>aAt720569
aCt>aGt330108
aCt>aSt1010
aCt>aTt691061165
aCt>aYt240242
aGA>aAC2022
aGa>aAa8303411
aGa>aCa2902412
aGa>aKa4040
aGa>aRa6063
aGa>aSa2021
aGa>aTa460466
aGc>aAc150107
aGc>aCc7075
aGc>aKc1010
aGc>aRc2021
aGc>aSc1010
aGc>aTc190190
aGg>aAg171501707123
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt13307515
aGt>aCt9504113
aGt>aKt110111
aGt>aRt1010
aGt>aSt350359
aGt>aTt154014917
aTa>aAa3030
aTa>aCa9206623
aTa>aGa7065
aTa>aYa2020
aTc>aAc1011
aTc>aCc6206112
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210212
aTg>aDg1010
aTg>aGg4043
aTg>aKg2020
aTt>aAt7076
aTt>aCt7404412
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310199
aaA>aaG762013517
aaA>aaM1011
aaA>aaR6060
aaA>aaT420188
aaA>aaW2021
aaC>aaA130135
aaC>aaG7076
aaC>aaM2020
aaC>aaT1281071548
aaC>aaY240222
aaG>aaA66104414
aaG>aaC150150
aaG>aaK4040
aaG>aaR3033
aaG>aaT168015128
aaT>aaA610169
aaT>aaC761015819
aaT>aaG160117
aaT>aaK1011
aaT>aaW3030
aaT>aaY9091
acA>acC12701110
acA>acG205012414
acA>acM2020
acA>acR4043
acA>acT56902713
acA>acW1010
acC>acA11701610
acC>acG10055
acC>acM2020
acC>acT379020728
acC>acY130131
acG>acA14702511
acG>acC6064
acG>acK1010
acG>acR3030
acG>acT9506213
acT>acA52402011
acT>acC406011624
acT>acG7502510
acT>acW2021
acT>acY7070
agA>agC23085
agA>agG19703011
agA>agM1010
agA>agR7073
agA>agT4101310
agC>agA5605651
agC>agM4041
agC>agT1797017001089
agC>agY2021
agG>agA184101664125
agG>agC1010
agG>agK2021
agG>agR100100
agG>agT290249
agT>agA420119
agT>agC15002810
agT>agG9074
agT>agW1010
agT>agY2021
atA>atC450109
atA>atG180189
atA>atM2020
atA>atR1011
atA>atT31401110
atA>atW1010
atC>atA10802511
atC>atG9055
atC>atM2021
atC>atT589033122
atC>atY4040
atG>atA9509210
atG>atC120124
atG>atK9090
atG>atR2020
atG>atT232021423
atT>atA34801310
atT>atC26003412
atT>atG120128
atT>atW210120
atT>atY3030
cAa>cCa4601510
cAa>cGa4403414
cAa>cMa5050
cAa>cRa1011
cAa>cTa180188
cAa>cWa1010
cAc>cGc3030
cAg>cCg21066
cAg>cGg240197
cAg>cTg130109
cAg>cWg1011
cAt>cCt1010
cAt>cGt560567
cAt>cMt5042
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa2101310
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa165016515
cCa>cYa150152
cCc>cAc1011
cCc>cGc2020
cCc>cTc182018260
cCc>cYc5051
cCg>cTg7071
cCg>cYg1010
cCt>cAt290125
cCt>cGt5051
cCt>cTt8126080531255
cCt>cYt240243
cGa>cTa3030
cGc>cAc200203
cGc>cTc9096
cGg>cAg6062
cGg>cCg3031
cGt>cAt170170
cGt>cKt1010
cGt>cTt240242
cTa>cAa1010
cTa>cCa9098
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320324
cTc>cWc1011
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2021
cTg>cWg1011
cTt>cAt250209
cTt>cCt170154
cTt>cDt1010
cTt>cGt110105
cTt>cWt2020
cTt>cYt9095
caA>caC3301911
caA>caG42504515
caA>caM2020
caA>caR5050
caA>caT3701610
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT30909820
caC>caY5050
caG>caA46005224
caG>caC250238
caG>caK110111
caG>caR1010
caG>caT32640321166
caT>caA9065
caT>caC358015211
caT>caG9097
caT>caK1010
caT>caY6060
ccA>ccC5701511
ccA>ccG9704920
ccA>ccM1010
ccA>ccR5050
ccA>ccT37203111
ccA>ccW2020
ccC>ccA4501310
ccC>ccG10099
ccC>ccM1010
ccC>ccT20708524
ccC>ccY3030
ccG>ccA5202311
ccG>ccC100109
ccG>ccK5052
ccG>ccT149012225
ccT>ccA34901812
ccT>ccC15404911
ccT>ccG7001910
ccT>ccW3030
ccT>ccY5050
cgA>cgC5053
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130109
cgC>cgT10303914
cgC>cgY1010
cgG>cgA320139
cgG>cgC9099
cgG>cgR1010
cgG>cgT270169
cgT>cgA6501010
cgT>cgC444037314
cgT>cgG16065
cgT>cgY4040
ctA>ctC4301010
ctA>ctG9801311
ctA>ctR1010
ctA>ctT16101710
ctA>ctW3030
ctC>ctA8401211
ctC>ctG580159
ctC>ctM1010
ctC>ctT1656165613691369
ctC>ctY180180
ctG>ctA11502012
ctG>ctC2001010
ctG>ctK2020
ctG>ctT7104715
ctT>ctA33102010
ctT>ctC320010328
ctT>ctG19402724
ctT>ctK1010
ctT>ctY3030
gAa>gCa150124
gAa>gGa6105410
gAa>gRa2020
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc1601210
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4042
gAg>gWg1010
gAt>gCt400158
gAt>gGt698506848201
gAt>gMt1010
gAt>gRt260261
gAt>gTt160155
gAt>gWt2020
gCa>gAa1301210
gCa>gGa11065
gCa>gMa1010
gCa>gTa306030221
gCa>gYa160151
gCc>gAc9098
gCc>gGc7075
gCc>gTc8408420
gCc>gYc3030
gCg>gAg3033
gCg>gTg220222
gCg>gYg2020
gCt>gAt350206
gCt>gGt690695
gCt>gMt120120
gCt>gSt1010
gCt>gTt8530781109
gCt>gYt240242
gGa>gAa2002015
gGa>gKa140142
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301522
gGc>gAc188018812
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6061
gGg>gAg9093
gGg>gTg1011
gGt>gAt510309
gGt>gCt8083
gGt>gKt430311
gGt>gRt1010
gGt>gTt940088219
gTa>gAa1010
gTa>gCa5102512
gTa>gGa5055
gTa>gYa2020
gTc>gAc2021
gTc>gCc7507010
gTc>gGc4044
gTc>gKc1010
gTc>gYc3030
gTg>gAg4043
gTg>gCg160119
gTg>gGg5055
gTg>gKg1011
gTg>gYg1011
gTt>gAt210109
gTt>gCt8904936
gTt>gGt300208
gTt>gKt400405
gTt>gWt2021
gTt>gYt2020
gaA>gaC680288
gaA>gaG48506312
gaA>gaM1010
gaA>gaR9093
gaA>gaT12601512
gaA>gaW160140
gaC>gaA950739
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045767
gaC>gaY140142
gaG>gaA42308513
gaG>gaC2501210
gaG>gaK7071
gaG>gaS1010
gaG>gaT9407811
gaT>gaA296019411
gaT>gaC760017954
gaT>gaG5401810
gaT>gaW2020
gaT>gaY100102
gcA>gcC7701410
gcA>gcG6902614
gcA>gcR1010
gcA>gcT42506641
gcA>gcW110113
gcC>gcA14402210
gcC>gcG150109
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011119
gcC>gcY6061
gcG>gcA12801712
gcG>gcC2401918
gcG>gcK1010
gcG>gcR2020
gcG>gcT9405414
gcT>gcA47901511
gcT>gcC588029622
gcT>gcG6901410
gcT>gcS1011
gcT>gcW2020
gcT>gcY9091
ggA>ggC2001610
ggA>ggG7504211
ggA>ggR1011
ggA>ggT3200131123
ggC>ggA5801810
ggC>ggG7077
ggC>ggT425010322
ggC>ggY2021
ggG>ggA8803110
ggG>ggC150109
ggG>ggT240249
ggT>ggA26601511
ggT>ggC30304211
ggT>ggG460129
ggT>ggW1011
ggT>ggY3030
gtA>gtC7601010
gtA>gtG25207210
gtA>gtR3030
gtA>gtT41001510
gtC>gtA17509110
gtC>gtG38098
gtC>gtM1011
gtC>gtT502021733
gtC>gtY7071
gtG>gtA25106927
gtG>gtC10402810
gtG>gtK6060
gtG>gtR3030
gtG>gtT288012922
gtT>gtA39201611
gtT>gtC35306418
gtT>gtG27201710
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc3201110
tAc>tWc1011
tAt>tCt1010
tAt>tGt1142011391074
tAt>tMt1011
tAt>tRt1010
tAt>tTt260119
tAt>tWt2020
tCa>tGa17076
tCa>tMa1010
tCa>tTa10590104329
tCa>tYa110110
tCc>tAc100109
tCc>tGc6065
tCc>tTc500503
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg3903913
tCg>tYg3032
tCt>tAt390396
tCt>tGt100105
tCt>tMt8081
tCt>tTt227022743
tCt>tYt220226
tGc>tAc1301312
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280281
tGt>tAt220224
tGt>tCt3020
tGt>tKt5042
tGt>tRt1011
tGt>tTt300309
tTa>tAa9094
tTa>tCa1671016671089
tTa>tGa6065
tTa>tWa2020
tTa>tYa9091
tTc>tAc9064
tTc>tCc1401410
tTc>tGc160115
tTc>tYc1010
tTg>tAg9098
tTg>tCg5054
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt183013811
tTt>tCt4001510
tTt>tGt140148
tTt>tKt2020
tTt>tWt1010
tTt>tYt100103
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657141
taC>taY200201
taG>taT1010
taT>taA4041
taT>taC7990208103
taT>taG540540
taT>taK4041
taT>taY3030
tcA>tcC860109
tcA>tcG9203528
tcA>tcR3030
tcA>tcT38701912
tcA>tcW1010
tcC>tcA530148
tcC>tcG8086
tcC>tcT340018231
tcC>tcY5050
tcG>tcA2802210
tcG>tcC8088
tcG>tcT4803210
tcT>tcA41301611
tcT>tcC16603114
tcT>tcG220119
tcT>tcY2020
tgA>tgG2021
tgC>tgA1010
tgC>tgT331013326
tgC>tgY7070
tgG>tgA2021
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190191
tgT>tgA3030
tgT>tgC35803310
tgT>tgG2020
tgT>tgK3030
tgT>tgY3031
ttA>ttC800119
ttA>ttG951058823
ttA>ttR4040
ttA>ttT29101712
ttA>ttW1010
ttC>ttA2401910
ttC>ttG100108
ttC>ttS2021
ttC>ttT774207066244
ttC>ttY320313
ttG>ttA43406515
ttG>ttC6001610
ttG>ttK160161
ttG>ttS1011
ttG>ttT141801287106
ttT>ttA5703613
ttT>ttC64005821
ttT>ttG5053
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: ctC>ctT