2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set6848
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801411
Aaa>Gaa2901915
Aaa>Maa2022
Aaa>Taa14076
Aaa>Waa1010
Aac>Cac7077
Aac>Gac4603023
Aac>Mac2022
Aac>Rac1011
Aac>Tac10083
Aac>Wac1011
Aag>Cag2901211
Aag>Gag2801611
Aag>Mag4044
Aag>Rag2021
Aag>Tag13086
Aag>Wag1011
Aat>Cat4701610
Aat>Gat11404237
Aat>Mat1010
Aat>Rat5055
Aat>Tat190168
Aat>Wat1501515
Aca>Cca7077
Aca>Gca9503422
Aca>Rca2020
Aca>Tca3302320
Aca>Wca1010
Acc>Ccc1010
Acc>Gcc200109
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1011
Acg>Gcg2201413
Acg>Rcg2020
Act>Cct17076
Act>Gct12305138
Act>Mct2020
Act>Rct3032
Act>Tct6001616
Act>Wct1201212
Aga>Cga9101210
Aga>Gga1101110
Aga>Tga2022
Agc>Ggc4003020
Agc>Rgc2021
Agg>Cgg32099
Agg>Ggg3033
Agg>Rgg1011
Agg>Tgg4042
Agt>Cgt7107171
Agt>Ggt10904735
Agt>Mgt3603611
Agt>Rgt2022
Agt>Tgt2501312
Agt>Wgt1010
Ata>Cta8082
Ata>Gta12405725
Ata>Rta2020
Ata>Tta200156
Atc>Ctc170129
Atc>Gtc6703121
Atc>Mtc1010
Atc>Ttc3031
Atg>Ctg150159
Atg>Gtg6305132
Atg>Mtg3032
Atg>Rtg3031
Atg>Ttg1701210
Atg>Wtg1010
Att>Ctt3501412
Att>Gtt500032736
Att>Mtt3032
Att>Rtt6062
Att>Ttt2301310
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303631
Caa>Gaa6202421
Caa>Maa2021
Caa>Saa1011
Caa>Taa2602014
Caa>Yaa9084
Cac>Aac13087
Cac>Gac1011
Cac>Tac9809751
Cac>Yac5051
Cag>Aag3901510
Cag>Gag2601212
Cag>Mag3032
Cag>Tag12066
Cag>Yag3031
Cat>Aat17098
Cat>Gat1011
Cat>Mat2020
Cat>Tat171016582
Cat>Yat100106
Cca>Aca2501411
Cca>Gca5055
Cca>Mca2022
Cca>Sca1010
Cca>Tca4940476103
Cca>Yca7071
Ccc>Acc8085
Ccc>Mcc1010
Ccc>Tcc3403421
Ccg>Acg2022
Ccg>Gcg1011
Ccg>Tcg240248
Cct>Act190179
Cct>Gct19099
Cct>Mct5052
Cct>Tct1700161108
Cct>Yct6054
Cga>Aga19099
Cga>Yga1010
Cgc>Agc6066
Cgc>Ggc1011
Cgc>Tgc2402416
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1011
Cgt>Tgt167016437
Cgt>Ygt4043
Cta>Ata3401613
Cta>Gta2022
Cta>Tta8220498394
Cta>Yta5052
Ctc>Atc3033
Ctc>Gtc1011
Ctc>Mtc8088
Ctc>Ttc193011775
Ctc>Ytc6062
Ctg>Atg7076
Ctg>Gtg8082
Ctg>Mtg1011
Ctg>Ttg17208036
Ctg>Ytg1011
Ctt>Att3803115
Ctt>Gtt200106
Ctt>Stt3031
Ctt>Ttt6250373274
Ctt>Ytt160167
GAa>CCa3033
GCt>AGt2022
GGa>TTa2020
GGt>TTt2022
GTg>CAg1011
GTt>CAt5051
Gaa>Aaa8405133
Gaa>Caa3302014
Gaa>Kaa3030
Gaa>Raa8085
Gaa>Saa1011
Gaa>Taa1901815
Gac>Aac294028218
Gac>Cac170177
Gac>Kac3032
Gac>Sac2020
Gac>Tac1160115107
Gag>Aag350199
Gag>Cag9099
Gag>Dag1011
Gag>Rag1010
Gag>Tag10098
Gat>Aat7305042
Gat>Cat3603526
Gat>Kat130126
Gat>Rat3030
Gat>Tat1900178137
Gca>Aca245021125
Gca>Cca150109
Gca>Kca4042
Gca>Rca100101
Gca>Tca10606641
Gcc>Acc4003017
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4043
Gcc>Tcc1601311
Gcg>Acg1801311
Gcg>Kcg1010
Gcg>Tcg2102119
Gct>Act16508962
Gct>Cct24086
Gct>Kct2402218
Gct>Rct8085
Gct>Sct2021
Gct>Tct2000150111
Gga>Aga3203215
Gga>Cga1647016471644
Gga>Rga1601612
Gga>Sga100107
Gga>Tga6064
Ggc>Agc3503529
Ggc>Cgc3033
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc3903925
Ggg>Agg8088
Ggg>Tgg1011
Ggt>Agt2810244201
Ggt>Cgt4033
Ggt>Kgt7072
Ggt>Rgt100104
Ggt>Tgt6606531
Gta>Ata315020234
Gta>Cta6065
Gta>Kta9084
Gta>Rta1011
Gta>Tta3040299188
Gtc>Atc7202718
Gtc>Ctc6065
Gtc>Ktc1011
Gtc>Rtc2020
Gtc>Stc2022
Gtc>Ttc4504525
Gtg>Atg5302215
Gtg>Ctg18901897
Gtg>Stg1010
Gtg>Ttg1140114104
Gtt>Att327011438
Gtt>Ctt4502015
Gtt>Ktt100102
Gtt>Rtt4042
Gtt>Stt2021
Gtt>Ttt2320229164
TAt>GTt7073
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2022
TTt>CAt2021
TTt>CCt1011
Tac>Aac1601510
Tac>Cac4903925
Tac>Gac2022
Tac>Yac140142
Tat>Aat9098
Tat>Cat1901915
Tat>Gat5055
Tat>Kat1011
Tat>Yat3033
Tca>Aca4701413
Tca>Cca6403411
Tca>Gca5301817
Tca>Kca1010
Tca>Wca1010
Tca>Yca4043
Tcc>Acc1201111
Tcc>Ccc5053
Tcc>Gcc260129
Tcc>Wcc3032
Tcc>Ycc1011
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act4201111
Tct>Cct2602115
Tct>Gct6701814
Tct>Wct1011
Tga>Aga1011
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6066
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5054
Tgg>Cgg1011
Tgg>Wgg2022
Tgt>Agt14096
Tgt>Cgt1010
Tgt>Ggt1011
Tgt>Kgt1011
Tgt>Ygt3031
Tta>Ata6201615
Tta>Cta60105132
Tta>Gta2401110
Tta>Kta1010
Tta>Yta5054
Ttc>Atc3031
Ttc>Ctc8907973
Ttc>Gtc8087
Ttc>Ktc1011
Ttc>Ytc3033
Ttg>Atg3701111
Ttg>Ctg567020642
Ttg>Gtg160157
Ttg>Ytg8083
Ttt>Att17097
Ttt>Ctt230020525
Ttt>Gtt2701916
Ttt>Ktt1010
Ttt>Wtt2022
Ttt>Ytt3031
aAa>aCa190119
aAa>aGa10205537
aAa>aRa1010
aAa>aTa19087
aAa>aWa2021
aAc>aCc210119
aAc>aGc5103027
aAc>aMc2022
aAc>aRc1010
aAc>aTc8087
aAc>aWc3033
aAg>aCg1801210
aAg>aGg2230206126
aAg>aMg1011
aAg>aRg5054
aAg>aTg18086
aAg>aWg1010
aAt>aCt11605039
aAt>aGt11707339
aAt>aMt2022
aAt>aRt6063
aAt>aTt9088
aAt>aWt4041
aCa>aAa164014618
aCa>aBa1011
aCa>aGa1501010
aCa>aMa3033
aCa>aTa3450333238
aCa>aYa210219
aCc>aAc12077
aCc>aGc9088
aCc>aTc2697026632630
aCc>aYc6061
aCg>aAg1010
aCg>aGg4044
aCg>aTg2760274255
aCg>aYg4041
aCt>aAt7205656
aCt>aGt330109
aCt>aSt1011
aCt>aTt6910611374
aCt>aYt2402412
aGA>aAC2022
aGa>aAa8303427
aGa>aCa2902420
aGa>aKa4041
aGa>aRa6063
aGa>aSa2020
aGa>aTa4604642
aGc>aAc150107
aGc>aCc7077
aGc>aKc1010
aGc>aRc2021
aGc>aSc1011
aGc>aTc1901916
aGg>aAg1715017071695
aGg>aCg1010
aGg>aKg2022
aGg>aRg9097
aGg>aTg4044
aGt>aAt13307514
aGt>aCt9504135
aGt>aKt110115
aGt>aRt1011
aGt>aSt3503510
aGt>aTt154014950
aTa>aAa3033
aTa>aCa9206647
aTa>aGa7066
aTa>aYa2021
aTc>aAc1011
aTc>aCc6206152
aTc>aGc1010
aTc>aYc2021
aTg>aAg4043
aTg>aCg2102113
aTg>aDg1011
aTg>aGg4044
aTg>aKg2021
aTt>aAt7077
aTt>aCt7404424
aTt>aGt4041
aTt>aWt1010
aTt>aYt6064
aaA>aaC3101919
aaA>aaG762013582
aaA>aaM1010
aaA>aaR6065
aaA>aaT4201814
aaA>aaW2021
aaC>aaA1301312
aaC>aaG7075
aaC>aaM2020
aaC>aaT12810715434
aaC>aaY2402211
aaG>aaA66104433
aaG>aaC1501512
aaG>aaK4042
aaG>aaR3030
aaG>aaT1680151118
aaT>aaA6101612
aaT>aaC7610158123
aaT>aaG1601110
aaT>aaK1011
aaT>aaW3032
aaT>aaY9093
acA>acC12701110
acA>acG2050124109
acA>acM2021
acA>acR4041
acA>acT56902716
acA>acW1011
acC>acA11701614
acC>acG10055
acC>acM2022
acC>acT3790207175
acC>acY130139
acG>acA14702513
acG>acC6065
acG>acK1011
acG>acR3032
acG>acT9506238
acT>acA52402017
acT>acC406011676
acT>acG7502522
acT>acW2021
acT>acY7075
agA>agC23086
agA>agG19703026
agA>agM1010
agA>agR7073
agA>agT4101310
agC>agA560565
agC>agM4040
agC>agT17970170041
agC>agY2020
agG>agA1841016641658
agG>agC1011
agG>agK2020
agG>agR100108
agG>agT2902420
agT>agA4201110
agT>agC15002818
agT>agG9073
agT>agW1011
agT>agY2021
atA>atC4501010
atA>atG1801813
atA>atM2022
atA>atR1010
atA>atT31401110
atA>atW1010
atC>atA1080259
atC>atG9055
atC>atM2021
atC>atT5890331167
atC>atY4043
atG>atA9509226
atG>atC120126
atG>atK9097
atG>atR2021
atG>atT2320214139
atT>atA34801311
atT>atC26003423
atT>atG120128
atT>atW2101212
atT>atY3033
cAa>cCa4601514
cAa>cGa4403418
cAa>cMa5054
cAa>cRa1010
cAa>cTa1801813
cAa>cWa1011
cAc>cGc3032
cAg>cCg21065
cAg>cGg2401914
cAg>cTg130108
cAg>cWg1011
cAt>cCt1011
cAt>cGt560569
cAt>cMt5040
cAt>cRt3030
cAt>cTt4041
cAt>cWt1011
cCa>cAa2101312
cCa>cGa2011
cCa>cMa1011
cCa>cSa1011
cCa>cTa1650165112
cCa>cYa1501512
cCc>cAc1011
cCc>cGc2021
cCc>cTc182018222
cCc>cYc5051
cCg>cTg7075
cCg>cYg1011
cCt>cAt290127
cCt>cGt5052
cCt>cTt8126080536765
cCt>cYt2402411
cGa>cTa3030
cGc>cAc2002012
cGc>cTc9098
cGg>cAg6065
cGg>cCg3032
cGt>cAt1701712
cGt>cKt1010
cGt>cTt2402420
cTa>cAa1010
cTa>cCa9099
cTa>cWa1011
cTa>cYa2020
cTc>cAc3032
cTc>cCc3203228
cTc>cWc1010
cTc>cYc1011
cTg>cAg5055
cTg>cCg2022
cTg>cGg2021
cTg>cWg1010
cTt>cAt2502015
cTt>cCt1701511
cTt>cDt1011
cTt>cGt110107
cTt>cWt2022
cTt>cYt9092
caA>caC3301917
caA>caG42504534
caA>caM2022
caA>caR5052
caA>caT3701614
caA>caW1011
caC>caA1011
caC>caG1011
caC>caT30909833
caC>caY5051
caG>caA46005222
caG>caC2502321
caG>caK110116
caG>caR1011
caG>caT3264032113175
caT>caA9065
caT>caC358015222
caT>caG9097
caT>caK1010
caT>caY6064
ccA>ccC5701514
ccA>ccG9704934
ccA>ccM1010
ccA>ccR5053
ccA>ccT37203127
ccA>ccW2021
ccC>ccA4501310
ccC>ccG10099
ccC>ccM1011
ccC>ccT20708557
ccC>ccY3031
ccG>ccA5202316
ccG>ccC1001010
ccG>ccK5052
ccG>ccT149012278
ccT>ccA34901812
ccT>ccC15404941
ccT>ccG7001915
ccT>ccW3032
ccT>ccY5055
cgA>cgC5055
cgA>cgG6065
cgA>cgR1010
cgA>cgT26066
cgC>cgA1301010
cgC>cgT10303928
cgC>cgY1011
cgG>cgA3201313
cgG>cgC9099
cgG>cgR1011
cgG>cgT2701615
cgT>cgA6501010
cgT>cgC444037345
cgT>cgG16065
cgT>cgY4042
ctA>ctC430109
ctA>ctG9801311
ctA>ctR1010
ctA>ctT16101715
ctA>ctW3031
ctC>ctA8401210
ctC>ctG5801510
ctC>ctM1011
ctC>ctT165601369201
ctC>ctY180186
ctG>ctA11502016
ctG>ctC200109
ctG>ctK2022
ctG>ctT7104742
ctT>ctA33102013
ctT>ctC320010352
ctT>ctG19402712
ctT>ctK1011
ctT>ctY3032
gAa>gCa150129
gAa>gGa6105432
gAa>gRa2021
gAa>gTa19099
gAa>gWa1010
gAc>gCc1301310
gAc>gGc1601210
gAc>gMc2020
gAc>gRc1010
gAc>gTc3030
gAg>gCg16065
gAg>gGg120128
gAg>gMg1011
gAg>gTg4043
gAg>gWg1011
gAt>gCt4001512
gAt>gGt6985698568486848
gAt>gMt1011
gAt>gRt260269
gAt>gTt1601510
gAt>gWt2022
gCa>gAa1301211
gCa>gGa11066
gCa>gMa1010
gCa>gTa3060302253
gCa>gYa160158
gCc>gAc9099
gCc>gGc7077
gCc>gTc8408460
gCc>gYc3030
gCg>gAg3033
gCg>gTg220228
gCg>gYg2021
gCt>gAt3502016
gCt>gGt690696
gCt>gMt120127
gCt>gSt1011
gCt>gTt8530781484
gCt>gYt2402414
gGa>gAa200204
gGa>gKa1401412
gGa>gRa1010
gGa>gSa1010
gGa>gTa153015227
gGc>gAc188018818
gGc>gCc1011
gGc>gKc3031
gGc>gRc6061
gGc>gTc6064
gGg>gAg9098
gGg>gTg1011
gGt>gAt5103022
gGt>gCt8086
gGt>gKt4303117
gGt>gRt1011
gGt>gTt9400882114
gTa>gAa1011
gTa>gCa5102514
gTa>gGa5055
gTa>gYa2022
gTc>gAc2021
gTc>gCc7507068
gTc>gGc4044
gTc>gKc1010
gTc>gYc3033
gTg>gAg4044
gTg>gCg160118
gTg>gGg5055
gTg>gKg1011
gTg>gYg1010
gTt>gAt210107
gTt>gCt8904915
gTt>gGt3002017
gTt>gKt4004016
gTt>gWt2022
gTt>gYt2022
gaA>gaC680287
gaA>gaG48506337
gaA>gaM1011
gaA>gaR9096
gaA>gaT12601513
gaA>gaW1601414
gaC>gaA9507369
gaC>gaG5055
gaC>gaM2022
gaC>gaT9520457201
gaC>gaY140147
gaG>gaA42308556
gaG>gaC2501211
gaG>gaK7073
gaG>gaS1011
gaG>gaT9407863
gaT>gaA296019418
gaT>gaC760017997
gaT>gaG5401813
gaT>gaW2021
gaT>gaY100108
gcA>gcC7701411
gcA>gcG6902619
gcA>gcR1010
gcA>gcT42506617
gcA>gcW110114
gcC>gcA14402218
gcC>gcG1501010
gcC>gcM2021
gcC>gcS1010
gcC>gcT415011156
gcC>gcY6062
gcG>gcA12801713
gcG>gcC240199
gcG>gcK1010
gcG>gcR2022
gcG>gcT9405433
gcT>gcA47901513
gcT>gcC588029690
gcT>gcG6901412
gcT>gcS1011
gcT>gcW2021
gcT>gcY9095
ggA>ggC200169
ggA>ggG7504222
ggA>ggR1010
ggA>ggT320013115
ggC>ggA5801817
ggC>ggG7077
ggC>ggT425010354
ggC>ggY2021
ggG>ggA8803125
ggG>ggC1501010
ggG>ggT2402420
ggT>ggA26601512
ggT>ggC30304227
ggT>ggG4601211
ggT>ggW1011
ggT>ggY3031
gtA>gtC760109
gtA>gtG25207250
gtA>gtR3032
gtA>gtT41001510
gtC>gtA17509190
gtC>gtG38098
gtC>gtM1010
gtC>gtT5020217159
gtC>gtY7073
gtG>gtA25106951
gtG>gtC10402811
gtG>gtK6065
gtG>gtR3033
gtG>gtT288012979
gtT>gtA39201612
gtT>gtC35306434
gtT>gtG27201716
gtT>gtK1010
gtT>gtY2022
tAc>tCc5055
tAc>tGc2102117
tAc>tTc3201111
tAc>tWc1010
tAt>tCt1011
tAt>tGt11420113942
tAt>tMt1010
tAt>tRt1011
tAt>tTt260119
tAt>tWt2020
tCa>tGa17076
tCa>tMa1010
tCa>tTa105901043735
tCa>tYa110114
tCc>tAc100109
tCc>tGc6066
tCc>tTc5005030
tCc>tYc6063
tCg>tAg3033
tCg>tGg1010
tCg>tTg3903932
tCg>tYg3030
tCt>tAt3903939
tCt>tGt100106
tCt>tMt8087
tCt>tTt2270227150
tCt>tYt220228
tGc>tAc130136
tGc>tTc10096
tGg>tCg2022
tGg>tKg2022
tGg>tTg2802821
tGt>tAt2202216
tGt>tCt3021
tGt>tKt5042
tGt>tRt1010
tGt>tTt3003019
tTa>tAa9098
tTa>tCa16710166728
tTa>tGa6065
tTa>tWa2021
tTa>tYa9096
tTc>tAc9064
tTc>tCc140149
tTc>tGc1601110
tTc>tYc1010
tTg>tAg9099
tTg>tCg5055
tTg>tGg1010
tTg>tWg1010
tTg>tYg1011
tTt>tAt183013814
tTt>tCt4001512
tTt>tGt1401410
tTt>tKt2022
tTt>tWt1010
tTt>tYt100105
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657573
taC>taY2002011
taG>taT1010
taT>taA4041
taT>taC799020891
taT>taG5405447
taT>taK4044
taT>taY3033
tcA>tcC8601010
tcA>tcG9203516
tcA>tcR3032
tcA>tcT38701914
tcA>tcW1010
tcC>tcA5301414
tcC>tcG8086
tcC>tcT3400182121
tcC>tcY5054
tcG>tcA2802219
tcG>tcC8088
tcG>tcT4803220
tcT>tcA41301611
tcT>tcC16603117
tcT>tcG2201110
tcT>tcY2022
tgA>tgG2021
tgC>tgA1011
tgC>tgT331013396
tgC>tgY7072
tgG>tgA2020
tgG>tgC1011
tgG>tgK1010
tgG>tgR2020
tgG>tgT1901915
tgT>tgA3032
tgT>tgC35803319
tgT>tgG2022
tgT>tgK3032
tgT>tgY3032
ttA>ttC8001111
ttA>ttG9510588537
ttA>ttR4041
ttA>ttT29101712
ttA>ttW1011
ttC>ttA2401910
ttC>ttG100108
ttC>ttS2020
ttC>ttT7742070666752
ttC>ttY3203113
ttG>ttA43406548
ttG>ttC6001612
ttG>ttK160168
ttG>ttS1011
ttG>ttT141801287160
ttT>ttA5703616
ttT>ttC64005833
ttT>ttG5055
ttT>ttK5051
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: gAt>gGt