2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set781
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1011
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801410
Aaa>Gaa290195
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1010
Aac>Cac7070
Aac>Gac4603011
Aac>Mac2020
Aac>Rac1010
Aac>Tac10081
Aac>Wac1010
Aag>Cag290129
Aag>Gag280169
Aag>Mag4041
Aag>Rag2020
Aag>Tag13085
Aag>Wag1011
Aat>Cat4701615
Aat>Gat11404210
Aat>Mat1011
Aat>Rat5050
Aat>Tat190164
Aat>Wat150152
Aca>Cca7076
Aca>Gca950349
Aca>Rca2021
Aca>Tca330236
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200109
Acc>Rcc1011
Acc>Tcc9088
Acc>Wcc1011
Acg>Gcg2201411
Acg>Rcg2022
Act>Cct17075
Act>Gct12305116
Act>Mct2022
Act>Rct3031
Act>Tct6001610
Act>Wct120120
Aga>Cga9101210
Aga>Gga110118
Aga>Tga2020
Agc>Ggc400309
Agc>Rgc2020
Agg>Cgg32099
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710715
Agt>Ggt10904710
Agt>Mgt3603622
Agt>Rgt2020
Agt>Tgt250138
Agt>Wgt1010
Ata>Cta8080
Ata>Gta12405713
Ata>Rta2021
Ata>Tta200155
Atc>Ctc1701210
Atc>Gtc6703110
Atc>Mtc1011
Atc>Ttc3031
Atg>Ctg150158
Atg>Gtg630516
Atg>Mtg3031
Atg>Rtg3031
Atg>Ttg170127
Atg>Wtg1010
Att>Ctt3501412
Att>Gtt500032748
Att>Mtt3031
Att>Rtt6061
Att>Ttt230135
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303610
Caa>Gaa620249
Caa>Maa2020
Caa>Saa1010
Caa>Taa260209
Caa>Yaa9082
Cac>Aac13087
Cac>Gac1010
Cac>Tac9809716
Cac>Yac5050
Cag>Aag390158
Cag>Gag2601210
Cag>Mag3031
Cag>Tag12065
Cag>Yag3031
Cat>Aat17099
Cat>Gat1010
Cat>Mat2021
Cat>Tat171016523
Cat>Yat100101
Cca>Aca2501410
Cca>Gca5053
Cca>Mca2020
Cca>Sca1011
Cca>Tca494047636
Cca>Yca7071
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340343
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240242
Cct>Act190176
Cct>Gct19098
Cct>Mct5052
Cct>Tct170016119
Cct>Yct6051
Cga>Aga19099
Cga>Yga1010
Cgc>Agc6062
Cgc>Ggc1010
Cgc>Tgc240240
Cgc>Ygc4042
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1011
Cgt>Tgt16701648
Cgt>Ygt4040
Cta>Ata3401610
Cta>Gta2022
Cta>Tta822049831
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc193011711
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg17208011
Ctg>Ytg1010
Ctt>Att380315
Ctt>Gtt200105
Ctt>Stt3033
Ctt>Ttt625037331
Ctt>Ytt160164
GAa>CCa3033
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa8405113
Gaa>Caa3302010
Gaa>Kaa3031
Gaa>Raa8081
Gaa>Saa1010
Gaa>Taa190189
Gac>Aac294028240
Gac>Cac170177
Gac>Kac3031
Gac>Sac2020
Gac>Tac11601158
Gag>Aag350196
Gag>Cag9098
Gag>Dag1010
Gag>Rag1010
Gag>Tag10095
Gat>Aat730509
Gat>Cat3603512
Gat>Kat130123
Gat>Rat3030
Gat>Tat190017813
Gca>Aca245021141
Gca>Cca1501010
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606616
Gcc>Acc4003011
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160133
Gcg>Acg1801310
Gcg>Kcg1011
Gcg>Tcg210213
Gct>Act16508916
Gct>Cct24085
Gct>Kct240222
Gct>Rct8081
Gct>Sct2021
Gct>Tct200015027
Gga>Aga320325
Gga>Cga16470164783
Gga>Rga160161
Gga>Sga100100
Gga>Tga6061
Ggc>Agc350357
Ggc>Cgc3030
Ggc>Kgc1011
Ggc>Rgc2021
Ggc>Sgc1010
Ggc>Tgc390391
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt281024419
Ggt>Cgt4030
Ggt>Kgt7071
Ggt>Rgt100102
Ggt>Tgt660655
Gta>Ata315020230
Gta>Cta6061
Gta>Kta9086
Gta>Rta1010
Gta>Tta304029993
Gtc>Atc7202718
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450458
Gtg>Atg5302213
Gtg>Ctg18901895
Gtg>Stg1010
Gtg>Ttg114011436
Gtt>Att327011427
Gtt>Ctt4502011
Gtt>Ktt100103
Gtt>Rtt4041
Gtt>Stt2020
Gtt>Ttt232022919
TAt>GTt7071
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160150
Tac>Cac490398
Tac>Gac2020
Tac>Yac140140
Tat>Aat9096
Tat>Cat1901911
Tat>Gat5054
Tat>Kat1010
Tat>Yat3030
Tca>Aca4701410
Tca>Cca6403412
Tca>Gca530189
Tca>Kca1010
Tca>Wca1010
Tca>Yca4041
Tcc>Acc120119
Tcc>Ccc5052
Tcc>Gcc2601210
Tcc>Wcc3031
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act4201110
Tct>Cct2602110
Tct>Gct6701810
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1011
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14096
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620169
Tta>Cta60105113
Tta>Gta240119
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc890799
Ttc>Gtc8085
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370119
Ttg>Ctg567020643
Ttg>Gtg160158
Ttg>Ytg8084
Ttt>Att17095
Ttt>Ctt230020514
Ttt>Gtt2701910
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190119
aAa>aGa10205512
aAa>aRa1010
aAa>aTa19086
aAa>aWa2021
aAc>aCc210118
aAc>aGc5103010
aAc>aMc2020
aAc>aRc1010
aAc>aTc8085
aAc>aWc3030
aAg>aCg180128
aAg>aGg223020616
aAg>aMg1010
aAg>aRg5051
aAg>aTg18087
aAg>aWg1011
aAt>aCt11605011
aAt>aGt11707310
aAt>aMt2020
aAt>aRt6060
aAt>aTt9085
aAt>aWt4042
aCa>aAa1640146134
aCa>aBa1010
aCa>aGa150108
aCa>aMa3030
aCa>aTa345033336
aCa>aYa210213
aCc>aAc12075
aCc>aGc9088
aCc>aTc269702663190
aCc>aYc6061
aCg>aAg1011
aCg>aGg4044
aCg>aTg276027441
aCg>aYg4041
aCt>aAt7205611
aCt>aGt330108
aCt>aSt1010
aCt>aTt691061148
aCt>aYt240242
aGA>aAC2022
aGa>aAa8303419
aGa>aCa2902410
aGa>aKa4041
aGa>aRa6061
aGa>aSa2022
aGa>aTa460466
aGc>aAc150107
aGc>aCc7075
aGc>aKc1010
aGc>aRc2021
aGc>aSc1010
aGc>aTc190192
aGg>aAg17150170791
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt13307512
aGt>aCt9504111
aGt>aKt110113
aGt>aRt1010
aGt>aSt3503522
aGt>aTt154014918
aTa>aAa3030
aTa>aCa9206613
aTa>aGa7065
aTa>aYa2020
aTc>aAc1011
aTc>aCc6206113
aTc>aGc1011
aTc>aYc2020
aTg>aAg4040
aTg>aCg210213
aTg>aDg1010
aTg>aGg4043
aTg>aKg2021
aTt>aAt7076
aTt>aCt7404413
aTt>aGt4040
aTt>aWt1011
aTt>aYt6060
aaA>aaC310198
aaA>aaG762013513
aaA>aaM1010
aaA>aaR6061
aaA>aaT4201810
aaA>aaW2021
aaC>aaA130135
aaC>aaG7076
aaC>aaM2022
aaC>aaT1281071532
aaC>aaY240224
aaG>aaA66104412
aaG>aaC150153
aaG>aaK4041
aaG>aaR3033
aaG>aaT168015113
aaT>aaA610168
aaT>aaC761015825
aaT>aaG160117
aaT>aaK1011
aaT>aaW3031
aaT>aaY9093
acA>acC12701110
acA>acG205012446
acA>acM2020
acA>acR4043
acA>acT56902710
acA>acW1010
acC>acA11701613
acC>acG10055
acC>acM2020
acC>acT379020722
acC>acY130132
acG>acA14702511
acG>acC6064
acG>acK1010
acG>acR3030
acG>acT9506212
acT>acA52402011
acT>acC406011618
acT>acG7502511
acT>acW2021
acT>acY7070
agA>agC23086
agA>agG19703014
agA>agM1011
agA>agR7073
agA>agT4101310
agC>agA5605651
agC>agM4044
agC>agT17970170050
agC>agY2020
agG>agA18410166493
agG>agC1010
agG>agK2021
agG>agR100100
agG>agT290248
agT>agA420119
agT>agC15002811
agT>agG9074
agT>agW1010
agT>agY2021
atA>atC450109
atA>atG180188
atA>atM2020
atA>atR1011
atA>atT31401110
atA>atW1010
atC>atA1080259
atC>atG9055
atC>atM2021
atC>atT589033124
atC>atY4040
atG>atA9509215
atG>atC120123
atG>atK9092
atG>atR2020
atG>atT232021418
atT>atA34801310
atT>atC26003411
atT>atG120127
atT>atW210120
atT>atY3030
cAa>cCa4601510
cAa>cGa4403411
cAa>cMa5050
cAa>cRa1011
cAa>cTa1801810
cAa>cWa1010
cAc>cGc3030
cAg>cCg21066
cAg>cGg240195
cAg>cTg130108
cAg>cWg1011
cAt>cCt1010
cAt>cGt560568
cAt>cMt5043
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210139
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa165016533
cCa>cYa150151
cCc>cAc1011
cCc>cGc2020
cCc>cTc1820182123
cCc>cYc5053
cCg>cTg7071
cCg>cYg1010
cCt>cAt290125
cCt>cGt5051
cCt>cTt812608053512
cCt>cYt240240
cGa>cTa3030
cGc>cAc200201
cGc>cTc9090
cGg>cAg6062
cGg>cCg3031
cGt>cAt170170
cGt>cKt1010
cGt>cTt240241
cTa>cAa1010
cTa>cCa9098
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320321
cTc>cWc1011
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2021
cTg>cWg1011
cTt>cAt250206
cTt>cCt170154
cTt>cDt1010
cTt>cGt110105
cTt>cWt2020
cTt>cYt9095
caA>caC3301910
caA>caG42504511
caA>caM2020
caA>caR5050
caA>caT3701610
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT30909813
caC>caY5051
caG>caA46005210
caG>caC250239
caG>caK110114
caG>caR1010
caG>caT326403211253
caT>caA9064
caT>caC358015216
caT>caG9095
caT>caK1010
caT>caY6061
ccA>ccC5701510
ccA>ccG9704911
ccA>ccM1010
ccA>ccR5050
ccA>ccT37203111
ccA>ccW2021
ccC>ccA4501310
ccC>ccG10099
ccC>ccM1010
ccC>ccT20708512
ccC>ccY3031
ccG>ccA5202311
ccG>ccC100109
ccG>ccK5050
ccG>ccT149012213
ccT>ccA34901811
ccT>ccC15404910
ccT>ccG7001910
ccT>ccW3030
ccT>ccY5050
cgA>cgC5053
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA1301010
cgC>cgT10303912
cgC>cgY1010
cgG>cgA320139
cgG>cgC9099
cgG>cgR1010
cgG>cgT2701610
cgT>cgA650109
cgT>cgC444037320
cgT>cgG16065
cgT>cgY4040
ctA>ctC4301010
ctA>ctG9801310
ctA>ctR1010
ctA>ctT16101710
ctA>ctW3031
ctC>ctA8401211
ctC>ctG580159
ctC>ctM1010
ctC>ctT165601369109
ctC>ctY180185
ctG>ctA11502010
ctG>ctC2001010
ctG>ctK2020
ctG>ctT7104712
ctT>ctA33102011
ctT>ctC320010312
ctT>ctG19402712
ctT>ctK1010
ctT>ctY3031
gAa>gCa150125
gAa>gGa610546
gAa>gRa2021
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc160129
gAc>gMc2021
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt4001510
gAt>gGt698506848484
gAt>gMt1010
gAt>gRt260265
gAt>gTt160156
gAt>gWt2020
gCa>gAa1301210
gCa>gGa11065
gCa>gMa1011
gCa>gTa306030231
gCa>gYa160153
gCc>gAc9098
gCc>gGc7075
gCc>gTc8408426
gCc>gYc3031
gCg>gAg3033
gCg>gTg220220
gCg>gYg2021
gCt>gAt350206
gCt>gGt690698
gCt>gMt120123
gCt>gSt1010
gCt>gTt853853781781
gCt>gYt240243
gGa>gAa200201
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301527
gGc>gAc188018834
gGc>gCc1010
gGc>gKc3031
gGc>gRc6060
gGc>gTc6061
gGg>gAg9093
gGg>gTg1011
gGt>gAt5103010
gGt>gCt8083
gGt>gKt430312
gGt>gRt1010
gGt>gTt940088239
gTa>gAa1010
gTa>gCa5102510
gTa>gGa5055
gTa>gYa2020
gTc>gAc2021
gTc>gCc7507012
gTc>gGc4044
gTc>gKc1010
gTc>gYc3030
gTg>gAg4043
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1011
gTt>gAt210108
gTt>gCt8904913
gTt>gGt300208
gTt>gKt4004021
gTt>gWt2021
gTt>gYt2020
gaA>gaC680286
gaA>gaG48506314
gaA>gaM1010
gaA>gaR9093
gaA>gaT12601510
gaA>gaW160140
gaC>gaA9507313
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045747
gaC>gaY140145
gaG>gaA42308511
gaG>gaC250129
gaG>gaK7072
gaG>gaS1010
gaG>gaT9407823
gaT>gaA296019413
gaT>gaC760017928
gaT>gaG540189
gaT>gaW2020
gaT>gaY100101
gcA>gcC7701410
gcA>gcG6902610
gcA>gcR1010
gcA>gcT42506610
gcA>gcW110116
gcC>gcA14402210
gcC>gcG150109
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011117
gcC>gcY6060
gcG>gcA12801710
gcG>gcC240199
gcG>gcK1010
gcG>gcR2020
gcG>gcT9405410
gcT>gcA47901510
gcT>gcC588029680
gcT>gcG6901411
gcT>gcS1011
gcT>gcW2020
gcT>gcY9092
ggA>ggC2001610
ggA>ggG7504212
ggA>ggR1011
ggA>ggT32001319
ggC>ggA5801810
ggC>ggG7077
ggC>ggT425010314
ggC>ggY2021
ggG>ggA8803110
ggG>ggC150109
ggG>ggT2402411
ggT>ggA26601511
ggT>ggC30304214
ggT>ggG460129
ggT>ggW1010
ggT>ggY3031
gtA>gtC7601010
gtA>gtG25207210
gtA>gtR3031
gtA>gtT41001510
gtC>gtA17509112
gtC>gtG38098
gtC>gtM1011
gtC>gtT502021727
gtC>gtY7074
gtG>gtA25106911
gtG>gtC10402813
gtG>gtK6061
gtG>gtR3030
gtG>gtT288012918
gtT>gtA39201610
gtT>gtC35306416
gtT>gtG27201710
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc320119
tAc>tWc1011
tAt>tCt1010
tAt>tGt11420113950
tAt>tMt1011
tAt>tRt1010
tAt>tTt2601110
tAt>tWt2020
tCa>tGa17076
tCa>tMa1011
tCa>tTa10590104354
tCa>tYa110112
tCc>tAc100109
tCc>tGc6065
tCc>tTc500505
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg3903911
tCg>tYg3032
tCt>tAt390396
tCt>tGt100105
tCt>tMt8081
tCt>tTt227022726
tCt>tYt220227
tGc>tAc130135
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280285
tGt>tAt220224
tGt>tCt3020
tGt>tKt5043
tGt>tRt1011
tGt>tTt300309
tTa>tAa9093
tTa>tCa16710166750
tTa>tGa6065
tTa>tWa2021
tTa>tYa9092
tTc>tAc9064
tTc>tCc140149
tTc>tGc160115
tTc>tYc1010
tTg>tAg9098
tTg>tCg5054
tTg>tGg1011
tTg>tWg1010
tTg>tYg1010
tTt>tAt183013814
tTt>tCt4001510
tTt>tGt140147
tTt>tKt2020
tTt>tWt1011
tTt>tYt100105
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657219
taC>taY200201
taG>taT1010
taT>taA4041
taT>taC799020814
taT>taG540542
taT>taK4040
taT>taY3030
tcA>tcC8601010
tcA>tcG9203511
tcA>tcR3031
tcA>tcT38701912
tcA>tcW1010
tcC>tcA530148
tcC>tcG8086
tcC>tcT340018235
tcC>tcY5050
tcG>tcA2802210
tcG>tcC8088
tcG>tcT4803212
tcT>tcA41301611
tcT>tcC16603112
tcT>tcG220119
tcT>tcY2020
tgA>tgG2021
tgC>tgA1010
tgC>tgT331013320
tgC>tgY7074
tgG>tgA2021
tgG>tgC1010
tgG>tgK1010
tgG>tgR2022
tgG>tgT190191
tgT>tgA3030
tgT>tgC35803313
tgT>tgG2020
tgT>tgK3031
tgT>tgY3031
ttA>ttC800119
ttA>ttG951058826
ttA>ttR4042
ttA>ttT29101710
ttA>ttW1010
ttC>ttA240199
ttC>ttG100108
ttC>ttS2022
ttC>ttT774207066510
ttC>ttY320316
ttG>ttA43406512
ttG>ttC6001610
ttG>ttK160162
ttG>ttS1011
ttG>ttT141801287185
ttT>ttA5703614
ttT>ttC64005812
ttT>ttG5053
ttT>ttK5053
ttT>ttY2021

 
Rules used
codons
Affected Codons
Values: gCt>gTt