2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set882
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1010
AAt>CTt1010
ACa>GAa2020
AaA>CaT3031
Aaa>Caa280142
Aaa>Gaa290190
Aaa>Maa2020
Aaa>Taa14071
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460304
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290121
Aag>Gag280161
Aag>Mag4040
Aag>Rag2021
Aag>Tag13080
Aag>Wag1010
Aat>Cat470162
Aat>Gat1140422
Aat>Mat1010
Aat>Rat5050
Aat>Tat190166
Aat>Wat150150
Aca>Cca7071
Aca>Gca950343
Aca>Rca2020
Aca>Tca330232
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200101
Acc>Rcc1010
Acc>Tcc9081
Acc>Wcc1010
Acg>Gcg220141
Acg>Rcg2020
Act>Cct17070
Act>Gct1230512
Act>Mct2020
Act>Rct3030
Act>Tct600161
Act>Wct120120
Aga>Cga910122
Aga>Gga110111
Aga>Tga2020
Agc>Ggc400302
Agc>Rgc2021
Agg>Cgg32091
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4043
Agt>Cgt710711
Agt>Ggt1090477
Agt>Mgt360362
Agt>Rgt2020
Agt>Tgt250131
Agt>Wgt1011
Ata>Cta8080
Ata>Gta1240574
Ata>Rta2020
Ata>Tta200156
Atc>Ctc170123
Atc>Gtc670313
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150151
Atg>Gtg630518
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170120
Atg>Wtg1010
Att>Ctt350142
Att>Gtt5000327258
Att>Mtt3030
Att>Rtt6061
Att>Ttt230131
CAT>TTG3031
CAa>ACa1011
CCa>AAa5050
CTt>GGt1010
Caa>Aaa630362
Caa>Gaa620243
Caa>Maa2020
Caa>Saa1010
Caa>Taa260201
Caa>Yaa9081
Cac>Aac13082
Cac>Gac1010
Cac>Tac980975
Cac>Yac5050
Cag>Aag390151
Cag>Gag260121
Cag>Mag3030
Cag>Tag12060
Cag>Yag3030
Cat>Aat17092
Cat>Gat1010
Cat>Mat2020
Cat>Tat171016524
Cat>Yat100100
Cca>Aca250142
Cca>Gca5051
Cca>Mca2020
Cca>Sca1010
Cca>Tca4940476307
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1011
Ccc>Tcc340346
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240249
Cct>Act190172
Cct>Gct19091
Cct>Mct5051
Cct>Tct17001619
Cct>Yct6051
Cga>Aga19091
Cga>Yga1010
Cgc>Agc6060
Cgc>Ggc1010
Cgc>Tgc240246
Cgc>Ygc4040
Cgg>Agg20050
Cgg>Tgg5050
Cgt>Agt62081
Cgt>Ggt1010
Cgt>Tgt167016417
Cgt>Ygt4040
Cta>Ata340162
Cta>Gta2021
Cta>Tta822049818
Cta>Yta5051
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc193011714
Ctc>Ytc6061
Ctg>Atg7071
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg17208012
Ctg>Ytg1010
Ctt>Att380312
Ctt>Gtt200101
Ctt>Stt3030
Ctt>Ttt625037346
Ctt>Ytt160163
GAa>CCa3030
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa840518
Gaa>Caa330204
Gaa>Kaa3030
Gaa>Raa8081
Gaa>Saa1010
Gaa>Taa190181
Gac>Aac29402823
Gac>Cac170172
Gac>Kac3030
Gac>Sac2020
Gac>Tac116011530
Gag>Aag350192
Gag>Cag9091
Gag>Dag1010
Gag>Rag1011
Gag>Tag10090
Gat>Aat730504
Gat>Cat360352
Gat>Kat130122
Gat>Rat3030
Gat>Tat19001788
Gca>Aca24502119
Gca>Cca150102
Gca>Kca4040
Gca>Rca100101
Gca>Tca1060666
Gcc>Acc400302
Gcc>Ccc10050
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160132
Gcg>Acg180132
Gcg>Kcg1010
Gcg>Tcg210211
Gct>Act1650895
Gct>Cct24080
Gct>Kct240221
Gct>Rct8080
Gct>Sct2020
Gct>Tct200015017
Gga>Aga320322
Gga>Cga16470164710
Gga>Rga160161
Gga>Sga100100
Gga>Tga6060
Ggc>Agc350351
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390394
Ggg>Agg8081
Ggg>Tgg1010
Ggt>Agt281024412
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660657
Gta>Ata31502026
Gta>Cta6061
Gta>Kta9081
Gta>Rta1010
Gta>Tta304029919
Gtc>Atc720277
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450457
Gtg>Atg530222
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg11401149
Gtt>Att327011416
Gtt>Ctt450202
Gtt>Ktt100103
Gtt>Rtt4041
Gtt>Stt2020
Gtt>Ttt232022939
TAt>GTt7071
TGc>GAc1010
TTa>AAa1010
TTa>CAa1011
TTa>CCa1011
TTg>GGg2020
TTt>CAt2020
TTt>CCt1010
Tac>Aac160152
Tac>Cac490393
Tac>Gac2020
Tac>Yac140142
Tat>Aat9090
Tat>Cat190195
Tat>Gat5051
Tat>Kat1010
Tat>Yat3030
Tca>Aca470142
Tca>Cca640342
Tca>Gca530182
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120111
Tcc>Ccc5052
Tcc>Gcc260121
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13081
Tcg>Gcg10050
Tct>Act420111
Tct>Cct260213
Tct>Gct670182
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1011
Tgc>Cgc5050
Tgc>Ggc6060
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14090
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620161
Tta>Cta60105117
Tta>Gta240111
Tta>Kta1011
Tta>Yta5050
Ttc>Atc3031
Ttc>Ctc890791
Ttc>Gtc8081
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370111
Ttg>Ctg56702065
Ttg>Gtg160159
Ttg>Ytg8080
Ttt>Att17090
Ttt>Ctt23002056
Ttt>Gtt270192
Ttt>Ktt1011
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190112
aAa>aGa1020556
aAa>aRa1011
aAa>aTa19080
aAa>aWa2020
aAc>aCc210112
aAc>aGc510302
aAc>aMc2020
aAc>aRc1011
aAc>aTc8082
aAc>aWc3030
aAg>aCg180123
aAg>aGg223020624
aAg>aMg1010
aAg>aRg5051
aAg>aTg18080
aAg>aWg1010
aAt>aCt1160505
aAt>aGt11707327
aAt>aMt2020
aAt>aRt6061
aAt>aTt9080
aAt>aWt4041
aCa>aAa16401463
aCa>aBa1010
aCa>aGa150101
aCa>aMa3030
aCa>aTa345033331
aCa>aYa210212
aCc>aAc12070
aCc>aGc9081
aCc>aTc26970266348
aCc>aYc6061
aCg>aAg1011
aCg>aGg4041
aCg>aTg276027411
aCg>aYg4041
aCt>aAt720561
aCt>aGt330102
aCt>aSt1010
aCt>aTt691061183
aCt>aYt240244
aGA>aAC2020
aGa>aAa830342
aGa>aCa290243
aGa>aKa4041
aGa>aRa6060
aGa>aSa2020
aGa>aTa460462
aGc>aAc150101
aGc>aCc7070
aGc>aKc1011
aGc>aRc2020
aGc>aSc1010
aGc>aTc190191
aGg>aAg17150170743
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330756
aGt>aCt950414
aGt>aKt110110
aGt>aRt1010
aGt>aSt350352
aGt>aTt154014931
aTa>aAa3030
aTa>aCa920663
aTa>aGa7060
aTa>aYa2021
aTc>aAc1010
aTc>aCc620614
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210211
aTg>aDg1010
aTg>aGg4041
aTg>aKg2020
aTt>aAt7071
aTt>aCt740449
aTt>aGt4041
aTt>aWt1010
aTt>aYt6061
aaA>aaC310191
aaA>aaG76201358
aaA>aaM1010
aaA>aaR6061
aaA>aaT420182
aaA>aaW2020
aaC>aaA130131
aaC>aaG7071
aaC>aaM2020
aaC>aaT1281071532
aaC>aaY240221
aaG>aaA6610445
aaG>aaC150152
aaG>aaK4041
aaG>aaR3030
aaG>aaT16801515
aaT>aaA610162
aaT>aaC761015820
aaT>aaG160111
aaT>aaK1010
aaT>aaW3030
aaT>aaY9092
acA>acC1270112
acA>acG20501249
acA>acM2020
acA>acR4040
acA>acT5690275
acA>acW1010
acC>acA1170163
acC>acG10050
acC>acM2020
acC>acT37902078
acC>acY130132
acG>acA1470252
acG>acC6061
acG>acK1010
acG>acR3031
acG>acT950628
acT>acA5240203
acT>acC40601167
acT>acG750251
acT>acW2020
acT>acY7070
agA>agC23082
agA>agG1970304
agA>agM1010
agA>agR7072
agA>agT410132
agC>agA560560
agC>agM4040
agC>agT17970170016
agC>agY2020
agG>agA18410166413
agG>agC1010
agG>agK2020
agG>agR100100
agG>agT290244
agT>agA420111
agT>agC1500288
agT>agG9073
agT>agW1010
agT>agY2020
atA>atC450101
atA>atG180182
atA>atM2020
atA>atR1010
atA>atT3140112
atA>atW1010
atC>atA10802512
atC>atG9050
atC>atM2020
atC>atT589033115
atC>atY4041
atG>atA950922
atG>atC120123
atG>atK9090
atG>atR2021
atG>atT232021415
atT>atA3480133
atT>atC2600347
atT>atG120121
atT>atW210120
atT>atY3030
cAa>cCa460151
cAa>cGa440341
cAa>cMa5050
cAa>cRa1010
cAa>cTa180184
cAa>cWa1010
cAc>cGc3031
cAg>cCg21061
cAg>cGg240190
cAg>cTg130102
cAg>cWg1010
cAt>cCt1010
cAt>cGt5605639
cAt>cMt5040
cAt>cRt3033
cAt>cTt4043
cAt>cWt1010
cCa>cAa210131
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa165016531
cCa>cYa150151
cCc>cAc1010
cCc>cGc2021
cCc>cTc18201827
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290120
cCt>cGt5052
cCt>cTt812608053108
cCt>cYt240245
cGa>cTa3033
cGc>cAc200203
cGc>cTc9090
cGg>cAg6061
cGg>cCg3031
cGt>cAt170174
cGt>cKt1011
cGt>cTt240241
cTa>cAa1011
cTa>cCa9091
cTa>cWa1010
cTa>cYa2022
cTc>cAc3031
cTc>cCc320320
cTc>cWc1010
cTc>cYc1010
cTg>cAg5050
cTg>cCg2020
cTg>cGg2021
cTg>cWg1010
cTt>cAt250202
cTt>cCt170152
cTt>cDt1010
cTt>cGt110100
cTt>cWt2020
cTt>cYt9091
caA>caC330192
caA>caG42504510
caA>caM2020
caA>caR5054
caA>caT370163
caA>caW1011
caC>caA1010
caC>caG1010
caC>caT30909847
caC>caY5052
caG>caA4600525
caG>caC250232
caG>caK110110
caG>caR1010
caG>caT32640321156
caT>caA9061
caT>caC358015213
caT>caG9090
caT>caK1010
caT>caY6060
ccA>ccC570152
ccA>ccG970495
ccA>ccM1010
ccA>ccR5052
ccA>ccT3720313
ccA>ccW2021
ccC>ccA450132
ccC>ccG10091
ccC>ccM1010
ccC>ccT20708525
ccC>ccY3031
ccG>ccA520232
ccG>ccC100101
ccG>ccK5050
ccG>ccT14901228
ccT>ccA3490186
ccT>ccC1540493
ccT>ccG700192
ccT>ccW3031
ccT>ccY5050
cgA>cgC5051
cgA>cgG6061
cgA>cgR1010
cgA>cgT26060
cgC>cgA130101
cgC>cgT1030393
cgC>cgY1010
cgG>cgA320131
cgG>cgC9091
cgG>cgR1010
cgG>cgT270161
cgT>cgA650101
cgT>cgC4440373322
cgT>cgG16060
cgT>cgY4042
ctA>ctC430102
ctA>ctG980132
ctA>ctR1011
ctA>ctT1610172
ctA>ctW3030
ctC>ctA840122
ctC>ctG580156
ctC>ctM1010
ctC>ctT16560136919
ctC>ctY180184
ctG>ctA1150202
ctG>ctC200102
ctG>ctK2020
ctG>ctT710473
ctT>ctA3310202
ctT>ctC320010311
ctT>ctG1940272
ctT>ctK1010
ctT>ctY3031
gAa>gCa150122
gAa>gGa6105415
gAa>gRa2020
gAa>gTa19090
gAa>gWa1011
gAc>gCc130133
gAc>gGc160122
gAc>gMc2020
gAc>gRc1011
gAc>gTc3033
gAg>gCg16061
gAg>gGg120122
gAg>gMg1010
gAg>gTg4042
gAg>gWg1010
gAt>gCt400152
gAt>gGt698506848114
gAt>gMt1010
gAt>gRt260261
gAt>gTt160152
gAt>gWt2020
gCa>gAa130122
gCa>gGa11060
gCa>gMa1010
gCa>gTa306030210
gCa>gYa160151
gCc>gAc9091
gCc>gGc7070
gCc>gTc840842
gCc>gYc3031
gCg>gAg3031
gCg>gTg220221
gCg>gYg2020
gCt>gAt350200
gCt>gGt690690
gCt>gMt120121
gCt>gSt1010
gCt>gTt853078139
gCt>gYt240242
gGa>gAa200200
gGa>gKa140140
gGa>gRa1011
gGa>gSa1011
gGa>gTa15301521
gGc>gAc18801883
gGc>gCc1010
gGc>gKc3030
gGc>gRc6062
gGc>gTc6062
gGg>gAg9092
gGg>gTg1010
gGt>gAt510308
gGt>gCt8082
gGt>gKt4303112
gGt>gRt1010
gGt>gTt940940882882
gTa>gAa1010
gTa>gCa510259
gTa>gGa5050
gTa>gYa2020
gTc>gAc2020
gTc>gCc750702
gTc>gGc4041
gTc>gKc1010
gTc>gYc3030
gTg>gAg4041
gTg>gCg160110
gTg>gGg5050
gTg>gKg1010
gTg>gYg1010
gTt>gAt210101
gTt>gCt890493
gTt>gGt300203
gTt>gKt400400
gTt>gWt2020
gTt>gYt2020
gaA>gaC6802818
gaA>gaG4850633
gaA>gaM1010
gaA>gaR9090
gaA>gaT1260152
gaA>gaW160140
gaC>gaA950731
gaC>gaG5050
gaC>gaM2020
gaC>gaT952045724
gaC>gaY140142
gaG>gaA4230856
gaG>gaC250121
gaG>gaK7071
gaG>gaS1010
gaG>gaT9407810
gaT>gaA29601941
gaT>gaC760017910
gaT>gaG540181
gaT>gaW2020
gaT>gaY100100
gcA>gcC770144
gcA>gcG690263
gcA>gcR1011
gcA>gcT4250667
gcA>gcW110110
gcC>gcA1440225
gcC>gcG150101
gcC>gcM2021
gcC>gcS1011
gcC>gcT415011116
gcC>gcY6060
gcG>gcA1280173
gcG>gcC240191
gcG>gcK1010
gcG>gcR2020
gcG>gcT9405417
gcT>gcA4790152
gcT>gcC58802968
gcT>gcG690142
gcT>gcS1010
gcT>gcW2021
gcT>gcY9091
ggA>ggC200163
ggA>ggG750423
ggA>ggR1010
ggA>ggT32001312
ggC>ggA580183
ggC>ggG7070
ggC>ggT42501036
ggC>ggY2020
ggG>ggA880315
ggG>ggC150101
ggG>ggT240242
ggT>ggA2660153
ggT>ggC3030427
ggT>ggG460122
ggT>ggW1010
ggT>ggY3030
gtA>gtC760102
gtA>gtG25207215
gtA>gtR3030
gtA>gtT4100156
gtC>gtA1750911
gtC>gtG38091
gtC>gtM1010
gtC>gtT502021741
gtC>gtY7070
gtG>gtA2510694
gtG>gtC1040282
gtG>gtK6060
gtG>gtR3031
gtG>gtT288012918
gtT>gtA3920163
gtT>gtC35306410
gtT>gtG2720172
gtT>gtK1010
gtT>gtY2020
tAc>tCc5050
tAc>tGc210211
tAc>tTc320111
tAc>tWc1010
tAt>tCt1010
tAt>tGt11420113916
tAt>tMt1010
tAt>tRt1010
tAt>tTt260113
tAt>tWt2022
tCa>tGa17071
tCa>tMa1010
tCa>tTa10590104339
tCa>tYa110111
tCc>tAc100101
tCc>tGc6060
tCc>tTc500501
tCc>tYc6061
tCg>tAg3031
tCg>tGg1011
tCg>tTg390395
tCg>tYg3030
tCt>tAt390390
tCt>tGt100100
tCt>tMt8080
tCt>tTt227022718
tCt>tYt220221
tGc>tAc130130
tGc>tTc10090
tGg>tCg2020
tGg>tKg2020
tGg>tTg280282
tGt>tAt220222
tGt>tCt3020
tGt>tKt5040
tGt>tRt1010
tGt>tTt300305
tTa>tAa9092
tTa>tCa16710166714
tTa>tGa6061
tTa>tWa2020
tTa>tYa9092
tTc>tAc9062
tTc>tCc140143
tTc>tGc160110
tTc>tYc1011
tTg>tAg9091
tTg>tCg5051
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt18301382
tTt>tCt400153
tTt>tGt140141
tTt>tKt2020
tTt>tWt1010
tTt>tYt100100
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657719
taC>taY200202
taG>taT1010
taT>taA4041
taT>taC799020823
taT>taG540546
taT>taK4040
taT>taY3030
tcA>tcC860101
tcA>tcG920352
tcA>tcR3030
tcA>tcT3870192
tcA>tcW1010
tcC>tcA530141
tcC>tcG8082
tcC>tcT340018223
tcC>tcY5050
tcG>tcA280223
tcG>tcC8081
tcG>tcT480326
tcT>tcA4130164
tcT>tcC1660319
tcT>tcG220112
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT33101335
tgC>tgY7071
tgG>tgA2020
tgG>tgC1010
tgG>tgK1011
tgG>tgR2020
tgG>tgT190191
tgT>tgA3030
tgT>tgC35803310
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800111
ttA>ttG951058818
ttA>ttR4042
ttA>ttT2910175
ttA>ttW1010
ttC>ttA240192
ttC>ttG100101
ttC>ttS2020
ttC>ttT774207066147
ttC>ttY320313
ttG>ttA4340655
ttG>ttC600162
ttG>ttK160161
ttG>ttS1010
ttG>ttT141801287713
ttT>ttA570362
ttT>ttC6400588
ttT>ttG5051
ttT>ttK5050
ttT>ttY2021

 
Rules used
codons
Affected Codons
Values: gGt>gTt