2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set10
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1010
AAt>CTt1010
ACa>GAa2020
AaA>CaT3030
Aaa>Caa280141
Aaa>Gaa290190
Aaa>Maa2020
Aaa>Taa14070
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460301
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290121
Aag>Gag280161
Aag>Mag4041
Aag>Rag2020
Aag>Tag13080
Aag>Wag1010
Aat>Cat470161
Aat>Gat1140421
Aat>Mat1010
Aat>Rat5050
Aat>Tat190160
Aat>Wat150152
Aca>Cca7070
Aca>Gca950341
Aca>Rca2020
Aca>Tca330230
Aca>Wca1010
Acc>Ccc1010
Acc>Gcc200100
Acc>Rcc1010
Acc>Tcc9080
Acc>Wcc1011
Acg>Gcg220141
Acg>Rcg2020
Act>Cct17070
Act>Gct1230511
Act>Mct2020
Act>Rct3030
Act>Tct600161
Act>Wct120121
Aga>Cga910121
Aga>Gga110110
Aga>Tga2020
Agc>Ggc400301
Agc>Rgc2020
Agg>Cgg32091
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710710
Agt>Ggt1090471
Agt>Mgt360360
Agt>Rgt2020
Agt>Tgt250130
Agt>Wgt1010
Ata>Cta8080
Ata>Gta1240571
Ata>Rta2020
Ata>Tta200150
Atc>Ctc170121
Atc>Gtc670310
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150150
Atg>Gtg630510
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170120
Atg>Wtg1010
Att>Ctt350141
Att>Gtt50003271
Att>Mtt3031
Att>Rtt6060
Att>Ttt230130
CAT>TTG3030
CAa>ACa1010
CCa>AAa5050
CTt>GGt1010
Caa>Aaa630361
Caa>Gaa620240
Caa>Maa2020
Caa>Saa1010
Caa>Taa260200
Caa>Yaa9081
Cac>Aac13080
Cac>Gac1010
Cac>Tac980970
Cac>Yac5050
Cag>Aag390150
Cag>Gag260121
Cag>Mag3030
Cag>Tag12060
Cag>Yag3030
Cat>Aat17090
Cat>Gat1010
Cat>Mat2020
Cat>Tat17101650
Cat>Yat100101
Cca>Aca250141
Cca>Gca5050
Cca>Mca2020
Cca>Sca1010
Cca>Tca49404761
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340340
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240240
Cct>Act190170
Cct>Gct19090
Cct>Mct5050
Cct>Tct17001610
Cct>Yct6050
Cga>Aga19091
Cga>Yga1010
Cgc>Agc6060
Cgc>Ggc1010
Cgc>Tgc240240
Cgc>Ygc4040
Cgg>Agg20050
Cgg>Tgg5050
Cgt>Agt62080
Cgt>Ggt1010
Cgt>Tgt16701640
Cgt>Ygt4040
Cta>Ata340160
Cta>Gta2021
Cta>Tta82204981
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc19301170
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg1720801
Ctg>Ytg1010
Ctt>Att380310
Ctt>Gtt200100
Ctt>Stt3031
Ctt>Ttt62503731
Ctt>Ytt160160
GAa>CCa3031
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa840511
Gaa>Caa330200
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190181
Gac>Aac29402821
Gac>Cac170170
Gac>Kac3031
Gac>Sac2020
Gac>Tac11601150
Gag>Aag350190
Gag>Cag9090
Gag>Dag1010
Gag>Rag1010
Gag>Tag10090
Gat>Aat730500
Gat>Cat360350
Gat>Kat130120
Gat>Rat3030
Gat>Tat19001780
Gca>Aca24502111
Gca>Cca150101
Gca>Kca4040
Gca>Rca100100
Gca>Tca1060661
Gcc>Acc400300
Gcc>Ccc10050
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160130
Gcg>Acg180131
Gcg>Kcg1010
Gcg>Tcg210210
Gct>Act1650891
Gct>Cct24080
Gct>Kct240220
Gct>Rct8080
Gct>Sct2020
Gct>Tct20001501
Gga>Aga320320
Gga>Cga1647016472
Gga>Rga160160
Gga>Sga100101
Gga>Tga6060
Ggc>Agc350351
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390390
Ggg>Agg8080
Ggg>Tgg1010
Ggt>Agt28102440
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100101
Ggt>Tgt660650
Gta>Ata31502021
Gta>Cta6060
Gta>Kta9081
Gta>Rta1010
Gta>Tta30402990
Gtc>Atc720271
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450451
Gtg>Atg530221
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg11401140
Gtt>Att32701141
Gtt>Ctt450201
Gtt>Ktt100100
Gtt>Rtt4040
Gtt>Stt2021
Gtt>Ttt23202290
TAt>GTt7070
TGc>GAc1010
TTa>AAa1010
TTa>CAa1010
TTa>CCa1010
TTg>GGg2020
TTt>CAt2020
TTt>CCt1010
Tac>Aac160150
Tac>Cac490390
Tac>Gac2020
Tac>Yac140140
Tat>Aat9090
Tat>Cat190191
Tat>Gat5050
Tat>Kat1010
Tat>Yat3030
Tca>Aca470141
Tca>Cca640341
Tca>Gca530181
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120111
Tcc>Ccc5050
Tcc>Gcc260121
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13080
Tcg>Gcg10050
Tct>Act420111
Tct>Cct260211
Tct>Gct670181
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5050
Tgc>Ggc6060
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14090
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620161
Tta>Cta6010511
Tta>Gta240110
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc890790
Ttc>Gtc8080
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370111
Ttg>Ctg56702061
Ttg>Gtg160151
Ttg>Ytg8081
Ttt>Att17090
Ttt>Ctt23002051
Ttt>Gtt270191
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190110
aAa>aGa1020551
aAa>aRa1010
aAa>aTa19080
aAa>aWa2020
aAc>aCc210111
aAc>aGc510301
aAc>aMc2020
aAc>aRc1010
aAc>aTc8080
aAc>aWc3030
aAg>aCg180120
aAg>aGg22302061
aAg>aMg1010
aAg>aRg5050
aAg>aTg18080
aAg>aWg1010
aAt>aCt1160501
aAt>aGt1170731
aAt>aMt2020
aAt>aRt6060
aAt>aTt9080
aAt>aWt4040
aCa>aAa16401460
aCa>aBa1010
aCa>aGa150100
aCa>aMa3030
aCa>aTa34503330
aCa>aYa210211
aCc>aAc12070
aCc>aGc9080
aCc>aTc2697026633
aCc>aYc6061
aCg>aAg1010
aCg>aGg4041
aCg>aTg27602741
aCg>aYg4040
aCt>aAt720561
aCt>aGt330100
aCt>aSt1010
aCt>aTt69106111
aCt>aYt240240
aGA>aAC2020
aGa>aAa830341
aGa>aCa290241
aGa>aKa4040
aGa>aRa6060
aGa>aSa2020
aGa>aTa460460
aGc>aAc150100
aGc>aCc7070
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190190
aGg>aAg1715017072
aGg>aCg1010
aGg>aKg2020
aGg>aRg9091
aGg>aTg4040
aGt>aAt1330751
aGt>aCt950411
aGt>aKt110110
aGt>aRt1010
aGt>aSt350350
aGt>aTt15401491
aTa>aAa3030
aTa>aCa920661
aTa>aGa7060
aTa>aYa2020
aTc>aAc1010
aTc>aCc620611
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210210
aTg>aDg1010
aTg>aGg4040
aTg>aKg2020
aTt>aAt7070
aTt>aCt740441
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310190
aaA>aaG76201351
aaA>aaM1010
aaA>aaR6060
aaA>aaT420180
aaA>aaW2021
aaC>aaA130130
aaC>aaG7070
aaC>aaM2020
aaC>aaT128107151
aaC>aaY240221
aaG>aaA6610441
aaG>aaC150150
aaG>aaK4041
aaG>aaR3030
aaG>aaT16801511
aaT>aaA610160
aaT>aaC76101581
aaT>aaG160110
aaT>aaK1011
aaT>aaW3030
aaT>aaY9090
acA>acC1270111
acA>acG20501241
acA>acM2020
acA>acR4040
acA>acT5690271
acA>acW1010
acC>acA1170161
acC>acG10050
acC>acM2020
acC>acT37902072
acC>acY130130
acG>acA1470251
acG>acC6061
acG>acK1010
acG>acR3030
acG>acT950621
acT>acA5240201
acT>acC40601163
acT>acG750251
acT>acW2020
acT>acY7070
agA>agC23080
agA>agG1970301
agA>agM1010
agA>agR7071
agA>agT410131
agC>agA560560
agC>agM4040
agC>agT1797017002
agC>agY2020
agG>agA1841016643
agG>agC1010
agG>agK2020
agG>agR100101
agG>agT290240
agT>agA420111
agT>agC1500281
agT>agG9070
agT>agW1010
agT>agY2020
atA>atC450101
atA>atG180180
atA>atM2020
atA>atR1010
atA>atT3140111
atA>atW1010
atC>atA1080251
atC>atG9050
atC>atM2020
atC>atT58903311
atC>atY4040
atG>atA950920
atG>atC120120
atG>atK9090
atG>atR2020
atG>atT23202140
atT>atA3480131
atT>atC2600341
atT>atG120120
atT>atW210120
atT>atY3030
cAa>cCa460151
cAa>cGa440340
cAa>cMa5050
cAa>cRa1010
cAa>cTa180181
cAa>cWa1010
cAc>cGc3030
cAg>cCg21060
cAg>cGg240190
cAg>cTg130100
cAg>cWg1011
cAt>cCt1010
cAt>cGt560560
cAt>cMt5040
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210131
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa16501650
cCa>cYa150150
cCc>cAc1010
cCc>cGc2020
cCc>cTc18201820
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290120
cCt>cGt5051
cCt>cTt8126080537
cCt>cYt240241
cGa>cTa3030
cGc>cAc200200
cGc>cTc9090
cGg>cAg6060
cGg>cCg3031
cGt>cAt170171
cGt>cKt1010
cGt>cTt240240
cTa>cAa1010
cTa>cCa9090
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320320
cTc>cWc1010
cTc>cYc1010
cTg>cAg5050
cTg>cCg2020
cTg>cGg2020
cTg>cWg1010
cTt>cAt250200
cTt>cCt170150
cTt>cDt1010
cTt>cGt110100
cTt>cWt2020
cTt>cYt9090
caA>caC330191
caA>caG4250451
caA>caM2021
caA>caR5050
caA>caT370160
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT3090981
caC>caY5050
caG>caA4600521
caG>caC250230
caG>caK110110
caG>caR1010
caG>caT3264032114
caT>caA9061
caT>caC35801521
caT>caG9090
caT>caK1010
caT>caY6061
ccA>ccC570151
ccA>ccG970491
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720311
ccA>ccW2020
ccC>ccA450131
ccC>ccG10091
ccC>ccM1010
ccC>ccT2070851
ccC>ccY3030
ccG>ccA520231
ccG>ccC100101
ccG>ccK5050
ccG>ccT14901221
ccT>ccA3490181
ccT>ccC1540491
ccT>ccG700191
ccT>ccW3030
ccT>ccY5050
cgA>cgC5050
cgA>cgG6060
cgA>cgR1010
cgA>cgT26060
cgC>cgA130101
cgC>cgT1030391
cgC>cgY1010
cgG>cgA320131
cgG>cgC9091
cgG>cgR1010
cgG>cgT270161
cgT>cgA650101
cgT>cgC44403731
cgT>cgG16060
cgT>cgY4040
ctA>ctC430101
ctA>ctG980131
ctA>ctR1010
ctA>ctT1610171
ctA>ctW3030
ctC>ctA840121
ctC>ctG580150
ctC>ctM1010
ctC>ctT1656013692
ctC>ctY180180
ctG>ctA1150201
ctG>ctC200101
ctG>ctK2020
ctG>ctT710471
ctT>ctA3310201
ctT>ctC32001031
ctT>ctG1940271
ctT>ctK1010
ctT>ctY3030
gAa>gCa150120
gAa>gGa610540
gAa>gRa2020
gAa>gTa19090
gAa>gWa1010
gAc>gCc130130
gAc>gGc160121
gAc>gMc2020
gAc>gRc1010
gAc>gTc3030
gAg>gCg16060
gAg>gGg120120
gAg>gMg1010
gAg>gTg4040
gAg>gWg1010
gAt>gCt400150
gAt>gGt6985068488
gAt>gMt1010
gAt>gRt260261
gAt>gTt160150
gAt>gWt2020
gCa>gAa130121
gCa>gGa11060
gCa>gMa1010
gCa>gTa30603021
gCa>gYa160150
gCc>gAc9090
gCc>gGc7070
gCc>gTc840840
gCc>gYc3030
gCg>gAg3030
gCg>gTg220220
gCg>gYg2020
gCt>gAt350200
gCt>gGt690690
gCt>gMt120121
gCt>gSt1010
gCt>gTt85307811
gCt>gYt240240
gGa>gAa200200
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301521
gGc>gAc18801880
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6060
gGg>gAg9090
gGg>gTg1011
gGt>gAt510300
gGt>gCt8080
gGt>gKt430311
gGt>gRt1010
gGt>gTt94008820
gTa>gAa1010
gTa>gCa510251
gTa>gGa5050
gTa>gYa2020
gTc>gAc2020
gTc>gCc750701
gTc>gGc4041
gTc>gKc1010
gTc>gYc3030
gTg>gAg4040
gTg>gCg160110
gTg>gGg5050
gTg>gKg1010
gTg>gYg1010
gTt>gAt210101
gTt>gCt890491
gTt>gGt300200
gTt>gKt400400
gTt>gWt2021
gTt>gYt2020
gaA>gaC680280
gaA>gaG4850631
gaA>gaM1010
gaA>gaR9091
gaA>gaT1260151
gaA>gaW160140
gaC>gaA950731
gaC>gaG5050
gaC>gaM2020
gaC>gaT95204571
gaC>gaY140142
gaG>gaA4230851
gaG>gaC250121
gaG>gaK7070
gaG>gaS1010
gaG>gaT940782
gaT>gaA29601941
gaT>gaC76001791
gaT>gaG540181
gaT>gaW2020
gaT>gaY10101010
gcA>gcC770141
gcA>gcG690261
gcA>gcR1010
gcA>gcT4250661
gcA>gcW110110
gcC>gcA1440221
gcC>gcG150101
gcC>gcM2020
gcC>gcS1010
gcC>gcT41501111
gcC>gcY6060
gcG>gcA1280171
gcG>gcC240191
gcG>gcK1010
gcG>gcR2020
gcG>gcT940541
gcT>gcA4790151
gcT>gcC58802961
gcT>gcG690141
gcT>gcS1011
gcT>gcW2020
gcT>gcY9090
ggA>ggC200161
ggA>ggG750421
ggA>ggR1010
ggA>ggT32001311
ggC>ggA580181
ggC>ggG7070
ggC>ggT42501031
ggC>ggY2021
ggG>ggA880311
ggG>ggC150101
ggG>ggT240241
ggT>ggA2660151
ggT>ggC3030422
ggT>ggG460121
ggT>ggW1010
ggT>ggY3030
gtA>gtC760101
gtA>gtG2520721
gtA>gtR3030
gtA>gtT4100151
gtC>gtA1750911
gtC>gtG38090
gtC>gtM1010
gtC>gtT50202171
gtC>gtY7070
gtG>gtA2510691
gtG>gtC1040281
gtG>gtK6060
gtG>gtR3030
gtG>gtT28801291
gtT>gtA3920161
gtT>gtC3530641
gtT>gtG2720171
gtT>gtK1010
gtT>gtY2020
tAc>tCc5050
tAc>tGc210210
tAc>tTc320111
tAc>tWc1010
tAt>tCt1010
tAt>tGt1142011391
tAt>tMt1010
tAt>tRt1010
tAt>tTt260110
tAt>tWt2020
tCa>tGa17070
tCa>tMa1010
tCa>tTa1059010431
tCa>tYa110110
tCc>tAc100101
tCc>tGc6060
tCc>tTc500500
tCc>tYc6061
tCg>tAg3030
tCg>tGg1010
tCg>tTg390390
tCg>tYg3030
tCt>tAt390391
tCt>tGt100100
tCt>tMt8080
tCt>tTt22702271
tCt>tYt220221
tGc>tAc130130
tGc>tTc10090
tGg>tCg2020
tGg>tKg2020
tGg>tTg280280
tGt>tAt220220
tGt>tCt3020
tGt>tKt5041
tGt>tRt1010
tGt>tTt300301
tTa>tAa9090
tTa>tCa1671016672
tTa>tGa6060
tTa>tWa2020
tTa>tYa9091
tTc>tAc9061
tTc>tCc140140
tTc>tGc160110
tTc>tYc1010
tTg>tAg9090
tTg>tCg5050
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt18301381
tTt>tCt400151
tTt>tGt140140
tTt>tKt2020
tTt>tWt1010
tTt>tYt100101
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT2256016572
taC>taY200201
taG>taT1010
taT>taA4040
taT>taC79902081
taT>taG540540
taT>taK4040
taT>taY3030
tcA>tcC860101
tcA>tcG920351
tcA>tcR3030
tcA>tcT3870191
tcA>tcW1010
tcC>tcA530140
tcC>tcG8080
tcC>tcT34001821
tcC>tcY5050
tcG>tcA280221
tcG>tcC8080
tcG>tcT480321
tcT>tcA4130161
tcT>tcC1660311
tcT>tcG220111
tcT>tcY2020
tgA>tgG2021
tgC>tgA1010
tgC>tgT33101331
tgC>tgY7070
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190190
tgT>tgA3030
tgT>tgC3580331
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800111
ttA>ttG95105881
ttA>ttR4040
ttA>ttT2910171
ttA>ttW1010
ttC>ttA240190
ttC>ttG100100
ttC>ttS2020
ttC>ttT7742070668
ttC>ttY320310
ttG>ttA4340651
ttG>ttC600161
ttG>ttK160160
ttG>ttS1011
ttG>ttT1418012871
ttT>ttA570361
ttT>ttC6400581
ttT>ttG5050
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: gaT>gaY