2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set14
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801410
Aaa>Gaa290195
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460309
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290129
Aag>Gag280167
Aag>Mag4041
Aag>Rag2020
Aag>Tag13085
Aag>Wag1010
Aat>Cat4701610
Aat>Gat11404210
Aat>Mat1010
Aat>Rat5050
Aat>Tat190163
Aat>Wat150151
Aca>Cca7076
Aca>Gca950349
Aca>Rca2020
Aca>Tca330236
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200108
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1011
Acg>Gcg220149
Acg>Rcg2020
Act>Cct17075
Act>Gct12305110
Act>Mct2020
Act>Rct3030
Act>Tct600169
Act>Wct120120
Aga>Cga9101210
Aga>Gga110118
Aga>Tga2020
Agc>Ggc400309
Agc>Rgc2020
Agg>Cgg32099
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710712
Agt>Ggt10904710
Agt>Mgt360360
Agt>Rgt2020
Agt>Tgt250138
Agt>Wgt1010
Ata>Cta8080
Ata>Gta12405710
Ata>Rta2020
Ata>Tta200155
Atc>Ctc1701210
Atc>Gtc670319
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150158
Atg>Gtg630515
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170127
Atg>Wtg1010
Att>Ctt3501410
Att>Gtt50003279
Att>Mtt3031
Att>Rtt6060
Att>Ttt230135
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303610
Caa>Gaa620249
Caa>Maa2020
Caa>Saa1010
Caa>Taa260206
Caa>Yaa9081
Cac>Aac13087
Cac>Gac1010
Cac>Tac980978
Cac>Yac5050
Cag>Aag390158
Cag>Gag260129
Cag>Mag3030
Cag>Tag12065
Cag>Yag3030
Cat>Aat17099
Cat>Gat1010
Cat>Mat2020
Cat>Tat17101656
Cat>Yat100100
Cca>Aca250149
Cca>Gca5053
Cca>Mca2020
Cca>Sca1010
Cca>Tca494047610
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340343
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240240
Cct>Act190174
Cct>Gct19098
Cct>Mct5050
Cct>Tct17001619
Cct>Yct6050
Cga>Aga19099
Cga>Yga1010
Cgc>Agc6062
Cgc>Ggc1010
Cgc>Tgc240240
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1010
Cgt>Tgt16701640
Cgt>Ygt4040
Cta>Ata340168
Cta>Gta2022
Cta>Tta822049810
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc19301178
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg17208010
Ctg>Ytg1010
Ctt>Att380314
Ctt>Gtt200105
Ctt>Stt3031
Ctt>Ttt625037310
Ctt>Ytt160160
GAa>CCa3033
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa8405110
Gaa>Caa330208
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190189
Gac>Aac29402827
Gac>Cac170175
Gac>Kac3031
Gac>Sac2020
Gac>Tac11601150
Gag>Aag350196
Gag>Cag9098
Gag>Dag1010
Gag>Rag1010
Gag>Tag10095
Gat>Aat730509
Gat>Cat360358
Gat>Kat130120
Gat>Rat3030
Gat>Tat19001785
Gca>Aca245021110
Gca>Cca1501010
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606610
Gcc>Acc400309
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4040
Gcc>Tcc160133
Gcg>Acg1801310
Gcg>Kcg1010
Gcg>Tcg210213
Gct>Act16508910
Gct>Cct24085
Gct>Kct240220
Gct>Rct8080
Gct>Sct2020
Gct>Tct20001509
Gga>Aga320320
Gga>Cga1647016472
Gga>Rga160160
Gga>Sga100100
Gga>Tga6060
Ggc>Agc350357
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390390
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt28102449
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660651
Gta>Ata315020210
Gta>Cta6061
Gta>Kta9081
Gta>Rta1010
Gta>Tta30402999
Gtc>Atc720279
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2020
Gtc>Stc2020
Gtc>Ttc450456
Gtg>Atg5302210
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg11401148
Gtt>Att327011410
Gtt>Ctt4502010
Gtt>Ktt100100
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt23202295
TAt>GTt7070
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160150
Tac>Cac490396
Tac>Gac2020
Tac>Yac140140
Tat>Aat9095
Tat>Cat1901910
Tat>Gat5053
Tat>Kat1010
Tat>Yat3030
Tca>Aca4701410
Tca>Cca6403410
Tca>Gca530189
Tca>Kca1010
Tca>Wca1010
Tca>Yca4040
Tcc>Acc120119
Tcc>Ccc5052
Tcc>Gcc260129
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420119
Tct>Cct260219
Tct>Gct6701810
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14095
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620169
Tta>Cta60105110
Tta>Gta240118
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc890795
Ttc>Gtc8085
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370119
Ttg>Ctg567020610
Ttg>Gtg160158
Ttg>Ytg8081
Ttt>Att17095
Ttt>Ctt230020510
Ttt>Gtt270199
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190119
aAa>aGa10205510
aAa>aRa1010
aAa>aTa19085
aAa>aWa2020
aAc>aCc210118
aAc>aGc5103010
aAc>aMc2020
aAc>aRc1010
aAc>aTc8085
aAc>aWc3030
aAg>aCg180128
aAg>aGg223020610
aAg>aMg1010
aAg>aRg5050
aAg>aTg18085
aAg>aWg1010
aAt>aCt11605010
aAt>aGt11707310
aAt>aMt2020
aAt>aRt6060
aAt>aTt9085
aAt>aWt4040
aCa>aAa16401469
aCa>aBa1010
aCa>aGa150108
aCa>aMa3030
aCa>aTa34503339
aCa>aYa210211
aCc>aAc12075
aCc>aGc9088
aCc>aTc2697026639
aCc>aYc6060
aCg>aAg1011
aCg>aGg4044
aCg>aTg27602749
aCg>aYg4040
aCt>aAt720569
aCt>aGt330108
aCt>aSt1010
aCt>aTt691061110
aCt>aYt240240
aGA>aAC2022
aGa>aAa8303410
aGa>aCa2902410
aGa>aKa4040
aGa>aRa6060
aGa>aSa2020
aGa>aTa460465
aGc>aAc150106
aGc>aCc7075
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190190
aGg>aAg17150170710
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt13307510
aGt>aCt950419
aGt>aKt110110
aGt>aRt1010
aGt>aSt350350
aGt>aTt15401499
aTa>aAa3030
aTa>aCa9206610
aTa>aGa7065
aTa>aYa2020
aTc>aAc1011
aTc>aCc6206110
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210210
aTg>aDg1010
aTg>aGg4043
aTg>aKg2020
aTt>aAt7076
aTt>aCt7404410
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310198
aaA>aaG762013510
aaA>aaM1010
aaA>aaR6060
aaA>aaT420188
aaA>aaW2021
aaC>aaA130135
aaC>aaG7076
aaC>aaM2020
aaC>aaT1281071510
aaC>aaY240220
aaG>aaA66104410
aaG>aaC150150
aaG>aaK4040
aaG>aaR3030
aaG>aaT16801516
aaT>aaA610168
aaT>aaC761015810
aaT>aaG160116
aaT>aaK1011
aaT>aaW3030
aaT>aaY9090
acA>acC12701110
acA>acG205012410
acA>acM2020
acA>acR4040
acA>acT56902710
acA>acW1010
acC>acA11701610
acC>acG10055
acC>acM2020
acC>acT379020710
acC>acY130130
acG>acA14702510
acG>acC6064
acG>acK1010
acG>acR3030
acG>acT9506210
acT>acA52402010
acT>acC406011610
acT>acG750259
acT>acW2020
acT>acY7070
agA>agC23085
agA>agG19703010
agA>agM1010
agA>agR7071
agA>agT4101310
agC>agA560560
agC>agM4040
agC>agT17970170010
agC>agY2020
agG>agA18410166412
agG>agC1010
agG>agK2020
agG>agR100100
agG>agT290248
agT>agA420119
agT>agC15002810
agT>agG9074
agT>agW1010
agT>agY2020
atA>atC450109
atA>atG180188
atA>atM2020
atA>atR1010
atA>atT31401110
atA>atW1010
atC>atA1080259
atC>atG9055
atC>atM2020
atC>atT589033110
atC>atY4040
atG>atA950928
atG>atC120123
atG>atK9090
atG>atR2020
atG>atT23202146
atT>atA34801310
atT>atC26003410
atT>atG120127
atT>atW210120
atT>atY3030
cAa>cCa460159
cAa>cGa440348
cAa>cMa5050
cAa>cRa1010
cAa>cTa180187
cAa>cWa1010
cAc>cGc3030
cAg>cCg21066
cAg>cGg240195
cAg>cTg130108
cAg>cWg1011
cAt>cCt1010
cAt>cGt560565
cAt>cMt5040
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210139
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa16501655
cCa>cYa150150
cCc>cAc1011
cCc>cGc2020
cCc>cTc18201820
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290125
cCt>cGt5051
cCt>cTt81260805311
cCt>cYt240240
cGa>cTa3030
cGc>cAc200200
cGc>cTc9090
cGg>cAg6062
cGg>cCg3031
cGt>cAt170170
cGt>cKt1010
cGt>cTt240240
cTa>cAa1010
cTa>cCa9098
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320321
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2021
cTg>cWg1010
cTt>cAt250205
cTt>cCt170154
cTt>cDt1010
cTt>cGt110105
cTt>cWt2020
cTt>cYt9090
caA>caC3301910
caA>caG42504510
caA>caM2020
caA>caR5050
caA>caT370169
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT30909810
caC>caY5050
caG>caA46005210
caG>caC250238
caG>caK110110
caG>caR1010
caG>caT3264032116
caT>caA9064
caT>caC358015210
caT>caG9095
caT>caK1010
caT>caY6060
ccA>ccC5701510
ccA>ccG9704910
ccA>ccM1010
ccA>ccR5050
ccA>ccT37203110
ccA>ccW2020
ccC>ccA4501310
ccC>ccG10099
ccC>ccM1010
ccC>ccT20708510
ccC>ccY3030
ccG>ccA5202310
ccG>ccC100109
ccG>ccK5050
ccG>ccT14901229
ccT>ccA34901810
ccT>ccC15404910
ccT>ccG7001910
ccT>ccW3030
ccT>ccY5050
cgA>cgC5053
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130109
cgC>cgT10303910
cgC>cgY1010
cgG>cgA320139
cgG>cgC9099
cgG>cgR1010
cgG>cgT270169
cgT>cgA650109
cgT>cgC444037312
cgT>cgG16065
cgT>cgY4040
ctA>ctC4301010
ctA>ctG9801310
ctA>ctR1010
ctA>ctT16101710
ctA>ctW3030
ctC>ctA8401210
ctC>ctG580159
ctC>ctM1010
ctC>ctT16560136910
ctC>ctY180180
ctG>ctA11502010
ctG>ctC2001010
ctG>ctK2020
ctG>ctT7104710
ctT>ctA33102010
ctT>ctC320010310
ctT>ctG19402710
ctT>ctK1010
ctT>ctY3030
gAa>gCa150124
gAa>gGa610545
gAa>gRa2020
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc160129
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt400158
gAt>gGt69850684811
gAt>gMt1010
gAt>gRt260260
gAt>gTt160154
gAt>gWt2020
gCa>gAa1301210
gCa>gGa11065
gCa>gMa1010
gCa>gTa30603027
gCa>gYa160150
gCc>gAc9098
gCc>gGc7075
gCc>gTc840845
gCc>gYc3030
gCg>gAg3033
gCg>gTg220220
gCg>gYg2020
gCt>gAt350205
gCt>gGt690695
gCt>gMt120120
gCt>gSt1010
gCt>gTt853078110
gCt>gYt240240
gGa>gAa200200
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301521
gGc>gAc18801886
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6060
gGg>gAg9093
gGg>gTg1011
gGt>gAt510308
gGt>gCt8083
gGt>gKt430310
gGt>gRt1010
gGt>gTt94008824
gTa>gAa1010
gTa>gCa5102510
gTa>gGa5055
gTa>gYa2020
gTc>gAc2020
gTc>gCc7507010
gTc>gGc4044
gTc>gKc1010
gTc>gYc3030
gTg>gAg4043
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1010
gTt>gAt210107
gTt>gCt8904910
gTt>gGt300208
gTt>gKt400400
gTt>gWt2021
gTt>gYt2020
gaA>gaC680286
gaA>gaG48506310
gaA>gaM1010
gaA>gaR9091
gaA>gaT12601510
gaA>gaW160140
gaC>gaA950739
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045711
gaC>gaY140140
gaG>gaA42308510
gaG>gaC250129
gaG>gaK7070
gaG>gaS1010
gaG>gaT9407810
gaT>gaA29601949
gaT>gaC760017910
gaT>gaG540189
gaT>gaW2020
gaT>gaY100101
gcA>gcC77771414
gcA>gcG6902610
gcA>gcR1010
gcA>gcT42506610
gcA>gcW110110
gcC>gcA14402210
gcC>gcG150109
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011110
gcC>gcY6060
gcG>gcA12801710
gcG>gcC240199
gcG>gcK1010
gcG>gcR2020
gcG>gcT9405410
gcT>gcA47901510
gcT>gcC588029610
gcT>gcG6901410
gcT>gcS1011
gcT>gcW2020
gcT>gcY9090
ggA>ggC200169
ggA>ggG7504210
ggA>ggR1010
ggA>ggT32001319
ggC>ggA5801810
ggC>ggG7077
ggC>ggT425010310
ggC>ggY2021
ggG>ggA8803110
ggG>ggC150109
ggG>ggT240249
ggT>ggA26601510
ggT>ggC30304210
ggT>ggG460129
ggT>ggW1010
ggT>ggY3030
gtA>gtC7601010
gtA>gtG25207210
gtA>gtR3030
gtA>gtT41001510
gtC>gtA1750919
gtC>gtG38098
gtC>gtM1010
gtC>gtT502021710
gtC>gtY7070
gtG>gtA25106910
gtG>gtC10402810
gtG>gtK6060
gtG>gtR3030
gtG>gtT288012910
gtT>gtA39201610
gtT>gtC35306410
gtT>gtG27201710
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc320119
tAc>tWc1010
tAt>tCt1010
tAt>tGt1142011395
tAt>tMt1010
tAt>tRt1010
tAt>tTt260119
tAt>tWt2020
tCa>tGa17076
tCa>tMa1010
tCa>tTa1059010439
tCa>tYa110110
tCc>tAc100109
tCc>tGc6065
tCc>tTc500500
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg390395
tCg>tYg3030
tCt>tAt390396
tCt>tGt100105
tCt>tMt8080
tCt>tTt227022710
tCt>tYt220221
tGc>tAc130135
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280280
tGt>tAt220222
tGt>tCt3020
tGt>tKt5041
tGt>tRt1010
tGt>tTt300306
tTa>tAa9093
tTa>tCa16710166710
tTa>tGa6065
tTa>tWa2020
tTa>tYa9091
tTc>tAc9064
tTc>tCc140149
tTc>tGc160115
tTc>tYc1010
tTg>tAg9098
tTg>tCg5054
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt183013810
tTt>tCt4001510
tTt>tGt140147
tTt>tKt2020
tTt>tWt1010
tTt>tYt100101
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT22560165712
taC>taY200200
taG>taT1010
taT>taA4040
taT>taC799020810
taT>taG540540
taT>taK4040
taT>taY3030
tcA>tcC860109
tcA>tcG9203510
tcA>tcR3030
tcA>tcT38701910
tcA>tcW1010
tcC>tcA530148
tcC>tcG8086
tcC>tcT340018210
tcC>tcY5050
tcG>tcA2802210
tcG>tcC8088
tcG>tcT4803210
tcT>tcA41301610
tcT>tcC16603110
tcT>tcG220119
tcT>tcY2020
tgA>tgG2021
tgC>tgA1010
tgC>tgT331013310
tgC>tgY7070
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190190
tgT>tgA3030
tgT>tgC35803310
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800119
ttA>ttG951058810
ttA>ttR4040
ttA>ttT29101710
ttA>ttW1010
ttC>ttA240198
ttC>ttG100108
ttC>ttS2020
ttC>ttT77420706612
ttC>ttY320310
ttG>ttA43406510
ttG>ttC6001610
ttG>ttK160160
ttG>ttS1011
ttG>ttT14180128712
ttT>ttA5703610
ttT>ttC64005810
ttT>ttG5053
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: gcA>gcC