2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set1139
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1010
AAt>CTt1010
ACa>GAa2020
AaA>CaT3030
Aaa>Caa280145
Aaa>Gaa290199
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1010
Aac>Cac7070
Aac>Gac460307
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290125
Aag>Gag280165
Aag>Mag4040
Aag>Rag2020
Aag>Tag13086
Aag>Wag1010
Aat>Cat470165
Aat>Gat1140426
Aat>Mat1010
Aat>Rat5050
Aat>Tat190161
Aat>Wat150150
Aca>Cca7073
Aca>Gca9503412
Aca>Rca2020
Aca>Tca330235
Aca>Wca1010
Acc>Ccc1010
Acc>Gcc200105
Acc>Rcc1010
Acc>Tcc9085
Acc>Wcc1010
Acg>Gcg220146
Acg>Rcg2020
Act>Cct17075
Act>Gct12305113
Act>Mct2020
Act>Rct3030
Act>Tct600165
Act>Wct120120
Aga>Cga910125
Aga>Gga110115
Aga>Tga2020
Agc>Ggc4003013
Agc>Rgc2020
Agg>Cgg32095
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710710
Agt>Ggt1090477
Agt>Mgt360360
Agt>Rgt2020
Agt>Tgt250135
Agt>Wgt1010
Ata>Cta8080
Ata>Gta1240575
Ata>Rta2020
Ata>Tta200155
Atc>Ctc170125
Atc>Gtc6703112
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150155
Atg>Gtg630519
Atg>Mtg3030
Atg>Rtg3030
Atg>Ttg170127
Atg>Wtg1010
Att>Ctt350145
Att>Gtt50003277
Att>Mtt3030
Att>Rtt6060
Att>Ttt230137
CAT>TTG3030
CAa>ACa1010
CCa>AAa5055
CTt>GGt1010
Caa>Aaa630366
Caa>Gaa620246
Caa>Maa2020
Caa>Saa1010
Caa>Taa260207
Caa>Yaa9080
Cac>Aac13085
Cac>Gac1010
Cac>Tac980978
Cac>Yac5050
Cag>Aag390156
Cag>Gag260125
Cag>Mag3030
Cag>Tag12065
Cag>Yag3030
Cat>Aat17095
Cat>Gat1010
Cat>Mat2020
Cat>Tat171016519
Cat>Yat100100
Cca>Aca250145
Cca>Gca5050
Cca>Mca2020
Cca>Sca1010
Cca>Tca494047611
Cca>Yca7070
Ccc>Acc8080
Ccc>Mcc1010
Ccc>Tcc340345
Ccg>Acg2020
Ccg>Gcg1010
Ccg>Tcg240240
Cct>Act190173
Cct>Gct19095
Cct>Mct5050
Cct>Tct170016116
Cct>Yct6050
Cga>Aga19095
Cga>Yga1010
Cgc>Agc6060
Cgc>Ggc1010
Cgc>Tgc240241
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62085
Cgt>Ggt1010
Cgt>Tgt167016410
Cgt>Ygt4041
Cta>Ata340166
Cta>Gta2020
Cta>Tta822049822
Cta>Yta5050
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc19301177
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg17208010
Ctg>Ytg1010
Ctt>Att3803113
Ctt>Gtt200106
Ctt>Stt3030
Ctt>Ttt625037326
Ctt>Ytt160160
GAa>CCa3030
GCt>AGt2020
GGa>TTa2022
GGt>TTt2020
GTg>CAg1010
GTt>CAt5051
Gaa>Aaa840517
Gaa>Caa330205
Gaa>Kaa3030
Gaa>Raa8080
Gaa>Saa1010
Gaa>Taa190186
Gac>Aac294028222
Gac>Cac170176
Gac>Kac3030
Gac>Sac2020
Gac>Tac11601154
Gag>Aag3501915
Gag>Cag9095
Gag>Dag1010
Gag>Rag1010
Gag>Tag10096
Gat>Aat730506
Gat>Cat360355
Gat>Kat130122
Gat>Rat3030
Gat>Tat190017814
Gca>Aca24502119
Gca>Cca150105
Gca>Kca4040
Gca>Rca100100
Gca>Tca10606615
Gcc>Acc4003011
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4041
Gcc>Tcc160130
Gcg>Acg180136
Gcg>Kcg1010
Gcg>Tcg210211
Gct>Act16508911
Gct>Cct24085
Gct>Kct240220
Gct>Rct8080
Gct>Sct2020
Gct>Tct200015015
Gga>Aga320329
Gga>Cga16470164725
Gga>Rga160162
Gga>Sga100100
Gga>Tga6061
Ggc>Agc350357
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1011
Ggc>Tgc390396
Ggg>Agg8085
Ggg>Tgg1010
Ggt>Agt281024417
Ggt>Cgt4030
Ggt>Kgt7070
Ggt>Rgt100100
Ggt>Tgt660655
Gta>Ata315020213
Gta>Cta6061
Gta>Kta9080
Gta>Rta1010
Gta>Tta30402997
Gtc>Atc720276
Gtc>Ctc6061
Gtc>Ktc1010
Gtc>Rtc2021
Gtc>Stc2020
Gtc>Ttc450455
Gtg>Atg530229
Gtg>Ctg18901890
Gtg>Stg1010
Gtg>Ttg11401147
Gtt>Att327011417
Gtt>Ctt450205
Gtt>Ktt100100
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt232022933
TAt>GTt7071
TGc>GAc1010
TTa>AAa1010
TTa>CAa1010
TTa>CCa1010
TTg>GGg2020
TTt>CAt2020
TTt>CCt1010
Tac>Aac160152
Tac>Cac490397
Tac>Gac2020
Tac>Yac140140
Tat>Aat9096
Tat>Cat190195
Tat>Gat5050
Tat>Kat1010
Tat>Yat3030
Tca>Aca470145
Tca>Cca640346
Tca>Gca530185
Tca>Kca1011
Tca>Wca1010
Tca>Yca4041
Tcc>Acc120115
Tcc>Ccc5051
Tcc>Gcc260125
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13085
Tcg>Gcg10055
Tct>Act420115
Tct>Cct260216
Tct>Gct670186
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5051
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14095
Tgt>Cgt1011
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620166
Tta>Cta6010515
Tta>Gta240115
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3031
Ttc>Ctc890797
Ttc>Gtc8085
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370115
Ttg>Ctg56702066
Ttg>Gtg160155
Ttg>Ytg8080
Ttt>Att17095
Ttt>Ctt23002057
Ttt>Gtt270195
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190115
aAa>aGa10205513
aAa>aRa1010
aAa>aTa19085
aAa>aWa2020
aAc>aCc210115
aAc>aGc510306
aAc>aMc2020
aAc>aRc1010
aAc>aTc8085
aAc>aWc3030
aAg>aCg180125
aAg>aGg223020647
aAg>aMg1010
aAg>aRg5050
aAg>aTg18085
aAg>aWg1010
aAt>aCt11605010
aAt>aGt1170739
aAt>aMt2020
aAt>aRt6060
aAt>aTt9085
aAt>aWt4040
aCa>aAa16401469
aCa>aBa1010
aCa>aGa150105
aCa>aMa3030
aCa>aTa345033316
aCa>aYa210212
aCc>aAc12075
aCc>aGc9085
aCc>aTc26970266313
aCc>aYc6061
aCg>aAg1010
aCg>aGg4040
aCg>aTg276027432
aCg>aYg4040
aCt>aAt720565
aCt>aGt330105
aCt>aSt1010
aCt>aTt691061146
aCt>aYt240240
aGA>aAC2020
aGa>aAa830346
aGa>aCa290247
aGa>aKa4040
aGa>aRa6062
aGa>aSa2020
aGa>aTa460466
aGc>aAc150105
aGc>aCc7075
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190190
aGg>aAg17150170731
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt1330758
aGt>aCt950418
aGt>aKt110110
aGt>aRt1010
aGt>aSt350350
aGt>aTt154014914
aTa>aAa3030
aTa>aCa9206617
aTa>aGa7065
aTa>aYa2020
aTc>aAc1010
aTc>aCc620617
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210211
aTg>aDg1010
aTg>aGg4040
aTg>aKg2020
aTt>aAt7075
aTt>aCt740447
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310195
aaA>aaG762013512
aaA>aaM1010
aaA>aaR6060
aaA>aaT420185
aaA>aaW2020
aaC>aaA130135
aaC>aaG7075
aaC>aaM2020
aaC>aaT1281071532
aaC>aaY240221
aaG>aaA6610449
aaG>aaC150150
aaG>aaK4040
aaG>aaR3030
aaG>aaT168015123
aaT>aaA610166
aaT>aaC761015811
aaT>aaG160115
aaT>aaK1010
aaT>aaW3030
aaT>aaY9090
acA>acC1270115
acA>acG20501248
acA>acM2020
acA>acR4040
acA>acT5690278
acA>acW1010
acC>acA1170165
acC>acG10055
acC>acM2020
acC>acT379020717
acC>acY130130
acG>acA1470255
acG>acC6060
acG>acK1010
acG>acR3030
acG>acT950627
acT>acA5240205
acT>acC406011612
acT>acG750257
acT>acW2020
acT>acY7070
agA>agC23085
agA>agG1970305
agA>agM1010
agA>agR7071
agA>agT410135
agC>agA560560
agC>agM4040
agC>agT1797017001082
agC>agY2021
agG>agA18410166430
agG>agC1010
agG>agK2020
agG>agR100100
agG>agT290246
agT>agA420115
agT>agC1500285
agT>agG9070
agT>agW1010
agT>agY2020
atA>atC450105
atA>atG180186
atA>atM2020
atA>atR1010
atA>atT3140115
atA>atW1010
atC>atA1080257
atC>atG9055
atC>atM2020
atC>atT589033115
atC>atY4040
atG>atA950925
atG>atC120121
atG>atK9090
atG>atR2020
atG>atT232021412
atT>atA3480135
atT>atC2600345
atT>atG120126
atT>atW210120
atT>atY3030
cAa>cCa460155
cAa>cGa4403411
cAa>cMa5050
cAa>cRa1010
cAa>cTa180185
cAa>cWa1010
cAc>cGc3030
cAg>cCg21065
cAg>cGg240197
cAg>cTg130106
cAg>cWg1010
cAt>cCt1010
cAt>cGt560567
cAt>cMt5040
cAt>cRt3030
cAt>cTt4040
cAt>cWt1010
cCa>cAa210136
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa165016513
cCa>cYa150152
cCc>cAc1011
cCc>cGc2020
cCc>cTc18201824
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290125
cCt>cGt5050
cCt>cTt8126080531099
cCt>cYt240243
cGa>cTa3030
cGc>cAc200202
cGc>cTc9090
cGg>cAg6062
cGg>cCg3030
cGt>cAt170170
cGt>cKt1010
cGt>cTt240242
cTa>cAa1010
cTa>cCa9095
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320323
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2020
cTg>cWg1010
cTt>cAt250207
cTt>cCt170150
cTt>cDt1010
cTt>cGt110105
cTt>cWt2020
cTt>cYt9090
caA>caC330195
caA>caG42504511
caA>caM2020
caA>caR5050
caA>caT370165
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT30909812
caC>caY5050
caG>caA46005219
caG>caC250235
caG>caK110110
caG>caR1010
caG>caT32640321120
caT>caA9061
caT>caC35801526
caT>caG9097
caT>caK1010
caT>caY6060
ccA>ccC570155
ccA>ccG9704914
ccA>ccM1010
ccA>ccR5050
ccA>ccT3720316
ccA>ccW2020
ccC>ccA450135
ccC>ccG10095
ccC>ccM1010
ccC>ccT2070857
ccC>ccY3030
ccG>ccA520236
ccG>ccC100105
ccG>ccK5052
ccG>ccT149012220
ccT>ccA3490186
ccT>ccC1540495
ccT>ccG700195
ccT>ccW3030
ccT>ccY5050
cgA>cgC5050
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130105
cgC>cgT1030399
cgC>cgY1010
cgG>cgA320135
cgG>cgC9095
cgG>cgR1010
cgG>cgT270165
cgT>cgA650105
cgT>cgC444037315
cgT>cgG16065
cgT>cgY4040
ctA>ctC430105
ctA>ctG980136
ctA>ctR1010
ctA>ctT1610175
ctA>ctW3030
ctC>ctA840125
ctC>ctG580155
ctC>ctM1010
ctC>ctT1656013691074
ctC>ctY180182
ctG>ctA1150207
ctG>ctC200105
ctG>ctK2020
ctG>ctT710478
ctT>ctA3310205
ctT>ctC320010325
ctT>ctG19402719
ctT>ctK1010
ctT>ctY3030
gAa>gCa150120
gAa>gGa610546
gAa>gRa2020
gAa>gTa19095
gAa>gWa1010
gAc>gCc130135
gAc>gGc160126
gAc>gMc2020
gAc>gRc1010
gAc>gTc3030
gAg>gCg16065
gAg>gGg120125
gAg>gMg1010
gAg>gTg4040
gAg>gWg1010
gAt>gCt400155
gAt>gGt69850684842
gAt>gMt1010
gAt>gRt260261
gAt>gTt160151
gAt>gWt2020
gCa>gAa130125
gCa>gGa11065
gCa>gMa1010
gCa>gTa306030217
gCa>gYa160150
gCc>gAc9095
gCc>gGc7075
gCc>gTc8408416
gCc>gYc3030
gCg>gAg3030
gCg>gTg220221
gCg>gYg2020
gCt>gAt350205
gCt>gGt690695
gCt>gMt120120
gCt>gSt1010
gCt>gTt853078150
gCt>gYt240240
gGa>gAa2002014
gGa>gKa140142
gGa>gRa1010
gGa>gSa1010
gGa>gTa15301520
gGc>gAc188018810
gGc>gCc1010
gGc>gKc3030
gGc>gRc6060
gGc>gTc6060
gGg>gAg9090
gGg>gTg1010
gGt>gAt510305
gGt>gCt8080
gGt>gKt430311
gGt>gRt1010
gGt>gTt940088216
gTa>gAa1010
gTa>gCa510257
gTa>gGa5055
gTa>gYa2020
gTc>gAc2020
gTc>gCc750705
gTc>gGc4040
gTc>gKc1010
gTc>gYc3030
gTg>gAg4040
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1010
gTt>gAt210105
gTt>gCt8904929
gTt>gGt300205
gTt>gKt400400
gTt>gWt2020
gTt>gYt2020
gaA>gaC680287
gaA>gaG4850637
gaA>gaM1010
gaA>gaR9090
gaA>gaT1260155
gaA>gaW160140
gaC>gaA950736
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045773
gaC>gaY140140
gaG>gaA4230857
gaG>gaC250125
gaG>gaK7070
gaG>gaS1010
gaG>gaT940786
gaT>gaA29601945
gaT>gaC760017946
gaT>gaG540186
gaT>gaW2020
gaT>gaY100101
gcA>gcC770145
gcA>gcG690269
gcA>gcR1010
gcA>gcT42506636
gcA>gcW110110
gcC>gcA1440225
gcC>gcG150105
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011112
gcC>gcY6061
gcG>gcA1280176
gcG>gcC2401914
gcG>gcK1010
gcG>gcR2020
gcG>gcT940549
gcT>gcA4790156
gcT>gcC588029615
gcT>gcG690145
gcT>gcS1010
gcT>gcW2020
gcT>gcY9090
ggA>ggC200165
ggA>ggG750426
ggA>ggR1010
ggA>ggT3200131120
ggC>ggA580185
ggC>ggG7075
ggC>ggT425010313
ggC>ggY2020
ggG>ggA880315
ggG>ggC150105
ggG>ggT240245
ggT>ggA2660155
ggT>ggC3030429
ggT>ggG460125
ggT>ggW1010
ggT>ggY3030
gtA>gtC760105
gtA>gtG2520725
gtA>gtR3030
gtA>gtT4100155
gtC>gtA1750915
gtC>gtG38095
gtC>gtM1010
gtC>gtT502021722
gtC>gtY7070
gtG>gtA25106921
gtG>gtC1040285
gtG>gtK6060
gtG>gtR3030
gtG>gtT288012912
gtT>gtA3920166
gtT>gtC35306411
gtT>gtG2720175
gtT>gtK1010
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc320115
tAc>tWc1010
tAt>tCt1010
tAt>tGt1142114211391139
tAt>tMt1010
tAt>tRt1010
tAt>tTt260115
tAt>tWt2020
tCa>tGa17075
tCa>tMa1010
tCa>tTa10590104319
tCa>tYa110110
tCc>tAc100105
tCc>tGc6065
tCc>tTc500502
tCc>tYc6060
tCg>tAg3030
tCg>tGg1010
tCg>tTg390399
tCg>tYg3030
tCt>tAt390395
tCt>tGt100105
tCt>tMt8080
tCt>tTt227022733
tCt>tYt220220
tGc>tAc1301312
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280280
tGt>tAt220221
tGt>tCt3020
tGt>tKt5040
tGt>tRt1010
tGt>tTt300306
tTa>tAa9091
tTa>tCa1671016671081
tTa>tGa6065
tTa>tWa2020
tTa>tYa9090
tTc>tAc9060
tTc>tCc140146
tTc>tGc160115
tTc>tYc1010
tTg>tAg9095
tTg>tCg5051
tTg>tGg1010
tTg>tWg1010
tTg>tYg1010
tTt>tAt18301386
tTt>tCt400155
tTt>tGt140145
tTt>tKt2020
tTt>tWt1010
tTt>tYt100100
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT22560165774
taC>taY200201
taG>taT1010
taT>taA4041
taT>taC799020896
taT>taG540543
taT>taK4040
taT>taY3030
tcA>tcC860105
tcA>tcG9203522
tcA>tcR3030
tcA>tcT3870196
tcA>tcW1010
tcC>tcA530145
tcC>tcG8085
tcC>tcT340018221
tcC>tcY5050
tcG>tcA280225
tcG>tcC8085
tcG>tcT480325
tcT>tcA4130165
tcT>tcC16603110
tcT>tcG220115
tcT>tcY2020
tgA>tgG2020
tgC>tgA1010
tgC>tgT331013310
tgC>tgY7070
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190190
tgT>tgA3030
tgT>tgC3580335
tgT>tgG2020
tgT>tgK3030
tgT>tgY3030
ttA>ttC800115
ttA>ttG951058814
ttA>ttR4040
ttA>ttT2910177
ttA>ttW1010
ttC>ttA240195
ttC>ttG100105
ttC>ttS2020
ttC>ttT77420706668
ttC>ttY320310
ttG>ttA43406510
ttG>ttC600165
ttG>ttK160160
ttG>ttS1010
ttG>ttT14180128731
ttT>ttA570365
ttT>ttC64005816
ttT>ttG5050
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: tAt>tGt