2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set1043
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa280149
Aaa>Gaa290198
Aaa>Maa2020
Aaa>Taa14075
Aaa>Waa1011
Aac>Cac7070
Aac>Gac460309
Aac>Mac2020
Aac>Rac1010
Aac>Tac10080
Aac>Wac1010
Aag>Cag290128
Aag>Gag280169
Aag>Mag4041
Aag>Rag2020
Aag>Tag13086
Aag>Wag1010
Aat>Cat4701610
Aat>Gat11404210
Aat>Mat1010
Aat>Rat5050
Aat>Tat190164
Aat>Wat150151
Aca>Cca7076
Aca>Gca950348
Aca>Rca2021
Aca>Tca330236
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200108
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1010
Acg>Gcg220148
Acg>Rcg2020
Act>Cct17075
Act>Gct12305114
Act>Mct2020
Act>Rct3030
Act>Tct600168
Act>Wct120121
Aga>Cga910129
Aga>Gga110118
Aga>Tga2020
Agc>Ggc4003010
Agc>Rgc2020
Agg>Cgg32098
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4040
Agt>Cgt710712
Agt>Ggt10904710
Agt>Mgt360362
Agt>Rgt2020
Agt>Tgt250138
Agt>Wgt1010
Ata>Cta8086
Ata>Gta12405720
Ata>Rta2021
Ata>Tta200157
Atc>Ctc170129
Atc>Gtc6703114
Atc>Mtc1010
Atc>Ttc3030
Atg>Ctg150158
Atg>Gtg6305115
Atg>Mtg3031
Atg>Rtg3030
Atg>Ttg170128
Atg>Wtg1010
Att>Ctt3501410
Att>Gtt500032721
Att>Mtt3030
Att>Rtt6060
Att>Ttt230135
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303611
Caa>Gaa6202412
Caa>Maa2020
Caa>Saa1010
Caa>Taa260207
Caa>Yaa9080
Cac>Aac13087
Cac>Gac1010
Cac>Tac9809712
Cac>Yac5050
Cag>Aag3901512
Cag>Gag260128
Cag>Mag3030
Cag>Tag12065
Cag>Yag3030
Cat>Aat17099
Cat>Gat1010
Cat>Mat2020
Cat>Tat171016521
Cat>Yat100101
Cca>Aca250148
Cca>Gca5053
Cca>Mca2020
Cca>Sca1010
Cca>Tca494047652
Cca>Yca7071
Ccc>Acc8081
Ccc>Mcc1010
Ccc>Tcc340343
Ccg>Acg2021
Ccg>Gcg1011
Ccg>Tcg240248
Cct>Act190174
Cct>Gct19098
Cct>Mct5050
Cct>Tct170016132
Cct>Yct6050
Cga>Aga19098
Cga>Yga1010
Cgc>Agc6063
Cgc>Ggc1010
Cgc>Tgc240240
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1010
Cgt>Tgt16701643
Cgt>Ygt4040
Cta>Ata340168
Cta>Gta2021
Cta>Tta822049896
Cta>Yta5052
Ctc>Atc3030
Ctc>Gtc1010
Ctc>Mtc8080
Ctc>Ttc193011714
Ctc>Ytc6060
Ctg>Atg7070
Ctg>Gtg8081
Ctg>Mtg1010
Ctg>Ttg17208012
Ctg>Ytg1010
Ctt>Att380314
Ctt>Gtt200105
Ctt>Stt3030
Ctt>Ttt625037379
Ctt>Ytt160161
GAa>CCa3032
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5050
Gaa>Aaa8405112
Gaa>Caa3302013
Gaa>Kaa3030
Gaa>Raa8081
Gaa>Saa1010
Gaa>Taa190189
Gac>Aac294028249
Gac>Cac170175
Gac>Kac3031
Gac>Sac2022
Gac>Tac116011521
Gag>Aag350197
Gag>Cag9098
Gag>Dag1011
Gag>Rag1010
Gag>Tag10095
Gat>Aat7305014
Gat>Cat3603512
Gat>Kat130120
Gat>Rat3030
Gat>Tat190017821
Gca>Aca245021116
Gca>Cca150109
Gca>Kca4041
Gca>Rca100100
Gca>Tca10606614
Gcc>Acc4003010
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4041
Gcc>Tcc160135
Gcg>Acg1801310
Gcg>Kcg1010
Gcg>Tcg210214
Gct>Act16508912
Gct>Cct24085
Gct>Kct240221
Gct>Rct8080
Gct>Sct2020
Gct>Tct200015015
Gga>Aga320321
Gga>Cga16470164711
Gga>Rga160160
Gga>Sga100101
Gga>Tga6061
Ggc>Agc350359
Ggc>Cgc3030
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc390391
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt281024415
Ggt>Cgt4030
Ggt>Kgt7071
Ggt>Rgt100100
Ggt>Tgt660654
Gta>Ata315020237
Gta>Cta6061
Gta>Kta9080
Gta>Rta1010
Gta>Tta304029991
Gtc>Atc7202710
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2021
Gtc>Stc2020
Gtc>Ttc450459
Gtg>Atg530229
Gtg>Ctg189018980
Gtg>Stg1010
Gtg>Ttg114011413
Gtt>Att327011411
Gtt>Ctt4502010
Gtt>Ktt100101
Gtt>Rtt4040
Gtt>Stt2020
Gtt>Ttt232022922
TAt>GTt7071
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2021
TTt>CAt2021
TTt>CCt1011
Tac>Aac160150
Tac>Cac490397
Tac>Gac2020
Tac>Yac140140
Tat>Aat9095
Tat>Cat190199
Tat>Gat5053
Tat>Kat1010
Tat>Yat3031
Tca>Aca470149
Tca>Cca6403411
Tca>Gca530188
Tca>Kca1010
Tca>Wca1011
Tca>Yca4040
Tcc>Acc120118
Tcc>Ccc5053
Tcc>Gcc260128
Tcc>Wcc3030
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420118
Tct>Cct260218
Tct>Gct6701812
Tct>Wct1011
Tga>Aga1010
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6066
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5051
Tgg>Cgg1011
Tgg>Wgg2020
Tgt>Agt14095
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3030
Tta>Ata620168
Tta>Cta60105113
Tta>Gta240118
Tta>Kta1010
Tta>Yta5050
Ttc>Atc3030
Ttc>Ctc8907965
Ttc>Gtc8085
Ttc>Ktc1010
Ttc>Ytc3032
Ttg>Atg370118
Ttg>Ctg567020636
Ttg>Gtg160157
Ttg>Ytg8081
Ttt>Att17096
Ttt>Ctt230020590
Ttt>Gtt2701910
Ttt>Ktt1010
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa190119
aAa>aGa10205512
aAa>aRa1010
aAa>aTa19085
aAa>aWa2020
aAc>aCc210117
aAc>aGc510309
aAc>aMc2021
aAc>aRc1010
aAc>aTc8085
aAc>aWc3030
aAg>aCg180128
aAg>aGg223020614
aAg>aMg1010
aAg>aRg5050
aAg>aTg18085
aAg>aWg1010
aAt>aCt11605011
aAt>aGt11707315
aAt>aMt2020
aAt>aRt6060
aAt>aTt9086
aAt>aWt4040
aCa>aAa16401469
aCa>aBa1011
aCa>aGa150108
aCa>aMa3030
aCa>aTa345033368
aCa>aYa210211
aCc>aAc12075
aCc>aGc9088
aCc>aTc269702663506
aCc>aYc6060
aCg>aAg1011
aCg>aGg4043
aCg>aTg27602749
aCg>aYg4040
aCt>aAt720568
aCt>aGt330108
aCt>aSt1010
aCt>aTt691061147
aCt>aYt240241
aGA>aAC2022
aGa>aAa8303414
aGa>aCa290249
aGa>aKa4041
aGa>aRa6060
aGa>aSa2020
aGa>aTa460469
aGc>aAc150106
aGc>aCc7075
aGc>aKc1010
aGc>aRc2020
aGc>aSc1010
aGc>aTc190192
aGg>aAg17150170720
aGg>aCg1010
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt13307510
aGt>aCt950418
aGt>aKt110110
aGt>aRt1010
aGt>aSt350352
aGt>aTt154014910
aTa>aAa3030
aTa>aCa9206612
aTa>aGa7065
aTa>aYa2020
aTc>aAc1011
aTc>aCc6206110
aTc>aGc1010
aTc>aYc2020
aTg>aAg4041
aTg>aCg210210
aTg>aDg1010
aTg>aGg4043
aTg>aKg2020
aTt>aAt7076
aTt>aCt7404415
aTt>aGt4040
aTt>aWt1010
aTt>aYt6060
aaA>aaC310198
aaA>aaG762013511
aaA>aaM1010
aaA>aaR6060
aaA>aaT420189
aaA>aaW2020
aaC>aaA130135
aaC>aaG7076
aaC>aaM2020
aaC>aaT12810715106
aaC>aaY240222
aaG>aaA66104410
aaG>aaC150150
aaG>aaK4041
aaG>aaR3030
aaG>aaT168015121
aaT>aaA610168
aaT>aaC761015815
aaT>aaG160117
aaT>aaK1010
aaT>aaW3031
aaT>aaY9091
acA>acC1270119
acA>acG205012410
acA>acM2020
acA>acR4040
acA>acT5690279
acA>acW1010
acC>acA1170169
acC>acG10055
acC>acM2020
acC>acT379020719
acC>acY130134
acG>acA14702512
acG>acC6063
acG>acK1010
acG>acR3030
acG>acT9506213
acT>acA52402010
acT>acC406011613
acT>acG750258
acT>acW2020
acT>acY7071
agA>agC23086
agA>agG19703010
agA>agM1010
agA>agR7071
agA>agT410139
agC>agA560560
agC>agM4040
agC>agT179701700221
agC>agY2020
agG>agA18410166422
agG>agC1010
agG>agK2021
agG>agR100100
agG>agT290248
agT>agA420119
agT>agC15002811
agT>agG9074
agT>agW1010
agT>agY2020
atA>atC450108
atA>atG1801811
atA>atM2020
atA>atR1010
atA>atT3140119
atA>atW1010
atC>atA1080258
atC>atG9055
atC>atM2020
atC>atT589033144
atC>atY4040
atG>atA9509212
atG>atC120126
atG>atK9091
atG>atR2020
atG>atT232021417
atT>atA3480139
atT>atC26003411
atT>atG120128
atT>atW210120
atT>atY3030
cAa>cCa460158
cAa>cGa4403410
cAa>cMa5050
cAa>cRa1010
cAa>cTa180189
cAa>cWa1011
cAc>cGc3030
cAg>cCg21066
cAg>cGg240198
cAg>cTg130108
cAg>cWg1010
cAt>cCt1010
cAt>cGt560565
cAt>cMt5041
cAt>cRt3030
cAt>cTt4042
cAt>cWt1010
cCa>cAa210138
cCa>cGa2010
cCa>cMa1010
cCa>cSa1010
cCa>cTa165016516
cCa>cYa150151
cCc>cAc1011
cCc>cGc2020
cCc>cTc182018239
cCc>cYc5050
cCg>cTg7070
cCg>cYg1010
cCt>cAt290125
cCt>cGt5050
cCt>cTt812608053807
cCt>cYt240241
cGa>cTa3030
cGc>cAc200202
cGc>cTc9090
cGg>cAg6062
cGg>cCg3031
cGt>cAt170173
cGt>cKt1010
cGt>cTt240241
cTa>cAa1010
cTa>cCa9099
cTa>cWa1010
cTa>cYa2020
cTc>cAc3030
cTc>cCc320321
cTc>cWc1010
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2021
cTg>cWg1010
cTt>cAt250205
cTt>cCt170156
cTt>cDt1010
cTt>cGt110105
cTt>cWt2020
cTt>cYt9090
caA>caC330199
caA>caG42504516
caA>caM2020
caA>caR5051
caA>caT370169
caA>caW1011
caC>caA1010
caC>caG1010
caC>caT30909812
caC>caY5050
caG>caA4600529
caG>caC250239
caG>caK110111
caG>caR1010
caG>caT326403211540
caT>caA9063
caT>caC358015215
caT>caG9096
caT>caK1010
caT>caY6061
ccA>ccC570159
ccA>ccG9704913
ccA>ccM1010
ccA>ccR5050
ccA>ccT37203110
ccA>ccW2020
ccC>ccA450139
ccC>ccG10098
ccC>ccM1010
ccC>ccT20708516
ccC>ccY3030
ccG>ccA520239
ccG>ccC100108
ccG>ccK5050
ccG>ccT149012210
ccT>ccA34901810
ccT>ccC15404931
ccT>ccG700199
ccT>ccW3030
ccT>ccY5050
cgA>cgC5053
cgA>cgG6065
cgA>cgR1010
cgA>cgT26065
cgC>cgA130108
cgC>cgT10303911
cgC>cgY1010
cgG>cgA320138
cgG>cgC9098
cgG>cgR1010
cgG>cgT2701610
cgT>cgA650108
cgT>cgC444037322
cgT>cgG16065
cgT>cgY4040
ctA>ctC430109
ctA>ctG980139
ctA>ctR1010
ctA>ctT1610179
ctA>ctW3030
ctC>ctA840129
ctC>ctG580159
ctC>ctM1010
ctC>ctT16560136929
ctC>ctY180180
ctG>ctA11502011
ctG>ctC200109
ctG>ctK2020
ctG>ctT7104711
ctT>ctA3310209
ctT>ctC320010311
ctT>ctG1940279
ctT>ctK1010
ctT>ctY3030
gAa>gCa150125
gAa>gGa610549
gAa>gRa2020
gAa>gTa19097
gAa>gWa1010
gAc>gCc130135
gAc>gGc160128
gAc>gMc2020
gAc>gRc1010
gAc>gTc3031
gAg>gCg16065
gAg>gGg120126
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt4001511
gAt>gGt698506848735
gAt>gMt1010
gAt>gRt260264
gAt>gTt160155
gAt>gWt2020
gCa>gAa130129
gCa>gGa11065
gCa>gMa1010
gCa>gTa3060302154
gCa>gYa160150
gCc>gAc9098
gCc>gGc7075
gCc>gTc8408412
gCc>gYc3030
gCg>gAg3033
gCg>gTg220220
gCg>gYg2020
gCt>gAt350205
gCt>gGt690696
gCt>gMt120122
gCt>gSt1010
gCt>gTt853078154
gCt>gYt240242
gGa>gAa200202
gGa>gKa140140
gGa>gRa1010
gGa>gSa1010
gGa>gTa1530152124
gGc>gAc188018811
gGc>gCc1011
gGc>gKc3031
gGc>gRc6060
gGc>gTc6060
gGg>gAg9095
gGg>gTg1010
gGt>gAt510309
gGt>gCt8083
gGt>gKt430316
gGt>gRt1010
gGt>gTt940088239
gTa>gAa1010
gTa>gCa510259
gTa>gGa5055
gTa>gYa2020
gTc>gAc2020
gTc>gCc750709
gTc>gGc4043
gTc>gKc1010
gTc>gYc3030
gTg>gAg4043
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1010
gTt>gAt210106
gTt>gCt8904910
gTt>gGt300208
gTt>gKt400405
gTt>gWt2020
gTt>gYt2020
gaA>gaC680287
gaA>gaG48506310
gaA>gaM1010
gaA>gaR9091
gaA>gaT1260159
gaA>gaW160141
gaC>gaA9507329
gaC>gaG5055
gaC>gaM2020
gaC>gaT9520457164
gaC>gaY140141
gaG>gaA42308513
gaG>gaC250129
gaG>gaK7071
gaG>gaS1010
gaG>gaT9407813
gaT>gaA296019489
gaT>gaC760017933
gaT>gaG540189
gaT>gaW2020
gaT>gaY100101
gcA>gcC770149
gcA>gcG6902611
gcA>gcR1010
gcA>gcT42506610
gcA>gcW110112
gcC>gcA14402210
gcC>gcG150109
gcC>gcM2020
gcC>gcS1010
gcC>gcT415011132
gcC>gcY6062
gcG>gcA1280179
gcG>gcC240198
gcG>gcK1010
gcG>gcR2020
gcG>gcT9405419
gcT>gcA47901510
gcT>gcC588029686
gcT>gcG690149
gcT>gcS1010
gcT>gcW2020
gcT>gcY9090
ggA>ggC200168
ggA>ggG7504210
ggA>ggR1010
ggA>ggT32001318
ggC>ggA5801810
ggC>ggG7077
ggC>ggT425010318
ggC>ggY2020
ggG>ggA880319
ggG>ggC150108
ggG>ggT240249
ggT>ggA2660159
ggT>ggC3030429
ggT>ggG460129
ggT>ggW1010
ggT>ggY3030
gtA>gtC760109
gtA>gtG25207210
gtA>gtR3030
gtA>gtT4100159
gtC>gtA1750919
gtC>gtG38098
gtC>gtM1010
gtC>gtT502021733
gtC>gtY7070
gtG>gtA25106911
gtG>gtC1040289
gtG>gtK6060
gtG>gtR3032
gtG>gtT288012919
gtT>gtA3920169
gtT>gtC35306413
gtT>gtG2720179
gtT>gtK1011
gtT>gtY2020
tAc>tCc5055
tAc>tGc210210
tAc>tTc320118
tAc>tWc1010
tAt>tCt1010
tAt>tGt11420113919
tAt>tMt1010
tAt>tRt1011
tAt>tTt260119
tAt>tWt2020
tCa>tGa17076
tCa>tMa1010
tCa>tTa1059105910431043
tCa>tYa110110
tCc>tAc100108
tCc>tGc6065
tCc>tTc500501
tCc>tYc6060
tCg>tAg3033
tCg>tGg1010
tCg>tTg390397
tCg>tYg3030
tCt>tAt390395
tCt>tGt100105
tCt>tMt8080
tCt>tTt227022719
tCt>tYt220221
tGc>tAc130135
tGc>tTc10095
tGg>tCg2020
tGg>tKg2021
tGg>tTg280284
tGt>tAt220225
tGt>tCt3020
tGt>tKt5040
tGt>tRt1010
tGt>tTt300307
tTa>tAa9093
tTa>tCa167101667216
tTa>tGa6065
tTa>tWa2020
tTa>tYa9091
tTc>tAc9063
tTc>tCc1401410
tTc>tGc160115
tTc>tYc1010
tTg>tAg9098
tTg>tCg5054
tTg>tGg1010
tTg>tWg1011
tTg>tYg1010
tTt>tAt1830138128
tTt>tCt400159
tTt>tGt140147
tTt>tKt2020
tTt>tWt1010
tTt>tYt100102
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657194
taC>taY200200
taG>taT1010
taT>taA4041
taT>taC799020815
taT>taG540540
taT>taK4043
taT>taY3030
tcA>tcC860108
tcA>tcG9203510
tcA>tcR3030
tcA>tcT3870199
tcA>tcW1010
tcC>tcA530148
tcC>tcG8086
tcC>tcT340018250
tcC>tcY5050
tcG>tcA2802210
tcG>tcC8088
tcG>tcT4803210
tcT>tcA4130169
tcT>tcC16603110
tcT>tcG220118
tcT>tcY2020
tgA>tgG2021
tgC>tgA1010
tgC>tgT331013316
tgC>tgY7070
tgG>tgA2020
tgG>tgC1010
tgG>tgK1010
tgG>tgR2020
tgG>tgT190191
tgT>tgA3030
tgT>tgC35803312
tgT>tgG2020
tgT>tgK3032
tgT>tgY3030
ttA>ttC800119
ttA>ttG9510588129
ttA>ttR4040
ttA>ttT2910179
ttA>ttW1010
ttC>ttA240199
ttC>ttG1001010
ttC>ttS2020
ttC>ttT774207066727
ttC>ttY320312
ttG>ttA43406514
ttG>ttC6001610
ttG>ttK160162
ttG>ttS1010
ttG>ttT14180128769
ttT>ttA5703611
ttT>ttC64005816
ttT>ttG5053
ttT>ttK5050
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: tCa>tTa