2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set7066
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801412
Aaa>Gaa2901915
Aaa>Maa2022
Aaa>Taa14076
Aaa>Waa1010
Aac>Cac7077
Aac>Gac4603024
Aac>Mac2022
Aac>Rac1011
Aac>Tac10083
Aac>Wac1011
Aag>Cag2901211
Aag>Gag2801611
Aag>Mag4044
Aag>Rag2021
Aag>Tag13086
Aag>Wag1011
Aat>Cat4701616
Aat>Gat11404238
Aat>Mat1010
Aat>Rat5055
Aat>Tat190168
Aat>Wat1501515
Aca>Cca7077
Aca>Gca9503422
Aca>Rca2020
Aca>Tca3302321
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200109
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1011
Acg>Gcg2201413
Acg>Rcg2020
Act>Cct17076
Act>Gct12305141
Act>Mct2020
Act>Rct3032
Act>Tct6001615
Act>Wct1201212
Aga>Cga9101211
Aga>Gga1101110
Aga>Tga2022
Agc>Ggc4003024
Agc>Rgc2021
Agg>Cgg32099
Agg>Ggg3032
Agg>Rgg1011
Agg>Tgg4042
Agt>Cgt7107170
Agt>Ggt10904738
Agt>Mgt3603611
Agt>Rgt2022
Agt>Tgt2501312
Agt>Wgt1010
Ata>Cta8082
Ata>Gta12405743
Ata>Rta2020
Ata>Tta200156
Atc>Ctc1701211
Atc>Gtc6703122
Atc>Mtc1011
Atc>Ttc3031
Atg>Ctg150159
Atg>Gtg6305133
Atg>Mtg3032
Atg>Rtg3031
Atg>Ttg1701210
Atg>Wtg1010
Att>Ctt3501413
Att>Gtt500032767
Att>Mtt3032
Att>Rtt6062
Att>Ttt2301310
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303632
Caa>Gaa6202422
Caa>Maa2021
Caa>Saa1011
Caa>Taa2602014
Caa>Yaa9084
Cac>Aac13088
Cac>Gac1011
Cac>Tac9809758
Cac>Yac5051
Cag>Aag3901510
Cag>Gag2601212
Cag>Mag3032
Cag>Tag12066
Cag>Yag3031
Cat>Aat17099
Cat>Gat1011
Cat>Mat2020
Cat>Tat171016596
Cat>Yat100106
Cca>Aca2501412
Cca>Gca5055
Cca>Mca2022
Cca>Sca1010
Cca>Tca4940476142
Cca>Yca7071
Ccc>Acc8085
Ccc>Mcc1010
Ccc>Tcc3403423
Ccg>Acg2022
Ccg>Gcg1011
Ccg>Tcg2402411
Cct>Act1901710
Cct>Gct19099
Cct>Mct5052
Cct>Tct1700161110
Cct>Yct6054
Cga>Aga19099
Cga>Yga1010
Cgc>Agc6066
Cgc>Ggc1011
Cgc>Tgc2402416
Cgc>Ygc4040
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1011
Cgt>Tgt167016445
Cgt>Ygt4044
Cta>Ata3401613
Cta>Gta2022
Cta>Tta8220498398
Cta>Yta5052
Ctc>Atc3033
Ctc>Gtc1011
Ctc>Mtc8088
Ctc>Ttc193011775
Ctc>Ytc6062
Ctg>Atg7076
Ctg>Gtg8088
Ctg>Mtg1011
Ctg>Ttg17208039
Ctg>Ytg1011
Ctt>Att3803116
Ctt>Gtt200106
Ctt>Stt3031
Ctt>Ttt6250373279
Ctt>Ytt160168
GAa>CCa3033
GCt>AGt2022
GGa>TTa2020
GGt>TTt2022
GTg>CAg1010
GTt>CAt5051
Gaa>Aaa8405137
Gaa>Caa3302015
Gaa>Kaa3030
Gaa>Raa8085
Gaa>Saa1011
Gaa>Taa1901815
Gac>Aac294028236
Gac>Cac170177
Gac>Kac3032
Gac>Sac2020
Gac>Tac116011585
Gag>Aag350199
Gag>Cag9099
Gag>Dag1011
Gag>Rag1010
Gag>Tag10098
Gat>Aat7305043
Gat>Cat3603528
Gat>Kat130126
Gat>Rat3030
Gat>Tat1900178141
Gca>Aca245021135
Gca>Cca1501010
Gca>Kca4043
Gca>Rca100100
Gca>Tca10606644
Gcc>Acc4003017
Gcc>Ccc10055
Gcc>Kcc1010
Gcc>Rcc4043
Gcc>Tcc1601311
Gcg>Acg1801312
Gcg>Kcg1010
Gcg>Tcg2102114
Gct>Act16508963
Gct>Cct24086
Gct>Kct2402218
Gct>Rct8085
Gct>Sct2021
Gct>Tct2000150115
Gga>Aga3203216
Gga>Cga1647016471646
Gga>Rga1601612
Gga>Sga100106
Gga>Tga6063
Ggc>Agc3503530
Ggc>Cgc3033
Ggc>Kgc1010
Ggc>Rgc2020
Ggc>Sgc1010
Ggc>Tgc3903927
Ggg>Agg8088
Ggg>Tgg1011
Ggt>Agt2810244207
Ggt>Cgt4033
Ggt>Kgt7073
Ggt>Rgt100104
Ggt>Tgt6606531
Gta>Ata315020258
Gta>Cta6066
Gta>Kta9084
Gta>Rta1011
Gta>Tta3040299186
Gtc>Atc7202718
Gtc>Ctc6065
Gtc>Ktc1011
Gtc>Rtc2020
Gtc>Stc2022
Gtc>Ttc4504525
Gtg>Atg5302217
Gtg>Ctg189018966
Gtg>Stg1010
Gtg>Ttg1140114103
Gtt>Att327011462
Gtt>Ctt4502016
Gtt>Ktt100103
Gtt>Rtt4042
Gtt>Stt2021
Gtt>Ttt2320229174
TAt>GTt7073
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1010
TTg>GGg2022
TTt>CAt2021
TTt>CCt1011
Tac>Aac160159
Tac>Cac4903925
Tac>Gac2022
Tac>Yac140142
Tat>Aat9098
Tat>Cat1901916
Tat>Gat5055
Tat>Kat1011
Tat>Yat3033
Tca>Aca4701414
Tca>Cca6403412
Tca>Gca5301817
Tca>Kca1010
Tca>Wca1010
Tca>Yca4043
Tcc>Acc1201111
Tcc>Ccc5054
Tcc>Gcc2601210
Tcc>Wcc3032
Tcc>Ycc1011
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act4201111
Tct>Cct2602116
Tct>Gct6701815
Tct>Wct1011
Tga>Aga1011
Tgc>Agc1010
Tgc>Cgc5055
Tgc>Ggc6066
Tgc>Wgc1010
Tgc>Ygc1010
Tgg>Agg5054
Tgg>Cgg1011
Tgg>Wgg2022
Tgt>Agt14096
Tgt>Cgt1010
Tgt>Ggt1011
Tgt>Kgt1011
Tgt>Ygt3031
Tta>Ata6201615
Tta>Cta60105134
Tta>Gta2401111
Tta>Kta1010
Tta>Yta5054
Ttc>Atc3031
Ttc>Ctc8907973
Ttc>Gtc8088
Ttc>Ktc1011
Ttc>Ytc3033
Ttg>Atg3701111
Ttg>Ctg567020665
Ttg>Gtg1601514
Ttg>Ytg8084
Ttt>Att17097
Ttt>Ctt230020585
Ttt>Gtt2701916
Ttt>Ktt1010
Ttt>Wtt2022
Ttt>Ytt3031
aAa>aCa1901110
aAa>aGa10205539
aAa>aRa1010
aAa>aTa19087
aAa>aWa2021
aAc>aCc2101110
aAc>aGc5103028
aAc>aMc2022
aAc>aRc1010
aAc>aTc8087
aAc>aWc3033
aAg>aCg1801210
aAg>aGg2230206125
aAg>aMg1011
aAg>aRg5055
aAg>aTg18086
aAg>aWg1010
aAt>aCt11605040
aAt>aGt11707345
aAt>aMt2022
aAt>aRt6063
aAt>aTt9088
aAt>aWt4041
aCa>aAa164014627
aCa>aBa1011
aCa>aGa1501010
aCa>aMa3033
aCa>aTa3450333248
aCa>aYa2102110
aCc>aAc12077
aCc>aGc9088
aCc>aTc2697026632606
aCc>aYc6061
aCg>aAg1011
aCg>aGg4044
aCg>aTg2760274256
aCg>aYg4041
aCt>aAt7205656
aCt>aGt3301010
aCt>aSt1011
aCt>aTt6910611436
aCt>aYt2402413
aGA>aAC2022
aGa>aAa8303428
aGa>aCa2902421
aGa>aKa4041
aGa>aRa6063
aGa>aSa2020
aGa>aTa4604642
aGc>aAc150108
aGc>aCc7077
aGc>aKc1010
aGc>aRc2021
aGc>aSc1011
aGc>aTc1901916
aGg>aAg1715017071696
aGg>aCg1010
aGg>aKg2022
aGg>aRg9096
aGg>aTg4044
aGt>aAt13307536
aGt>aCt9504134
aGt>aKt110115
aGt>aRt1011
aGt>aSt3503510
aGt>aTt154014953
aTa>aAa3033
aTa>aCa9206649
aTa>aGa7066
aTa>aYa2021
aTc>aAc1011
aTc>aCc6206153
aTc>aGc1011
aTc>aYc2021
aTg>aAg4043
aTg>aCg2102114
aTg>aDg1011
aTg>aGg4044
aTg>aKg2021
aTt>aAt7077
aTt>aCt7404428
aTt>aGt4042
aTt>aWt1010
aTt>aYt6062
aaA>aaC3101919
aaA>aaG762013585
aaA>aaM1010
aaA>aaR6065
aaA>aaT4201814
aaA>aaW2021
aaC>aaA1301312
aaC>aaG7076
aaC>aaM2020
aaC>aaT12810715498
aaC>aaY2402213
aaG>aaA66104435
aaG>aaC1501512
aaG>aaK4042
aaG>aaR3030
aaG>aaT1680151117
aaT>aaA6101612
aaT>aaC7610158126
aaT>aaG1601110
aaT>aaK1011
aaT>aaW3032
aaT>aaY9093
acA>acC12701111
acA>acG2050124110
acA>acM2021
acA>acR4042
acA>acT56902717
acA>acW1011
acC>acA11701615
acC>acG10055
acC>acM2022
acC>acT3790207176
acC>acY130139
acG>acA14702516
acG>acC6065
acG>acK1011
acG>acR3032
acG>acT9506239
acT>acA52402018
acT>acC406011699
acT>acG7502522
acT>acW2021
acT>acY7076
agA>agC23086
agA>agG19703027
agA>agM1010
agA>agR7073
agA>agT4101311
agC>agA5605615
agC>agM4040
agC>agT179701700186
agC>agY2020
agG>agA1841016641662
agG>agC1011
agG>agK2020
agG>agR100107
agG>agT2902421
agT>agA4201110
agT>agC15002824
agT>agG9074
agT>agW1011
agT>agY2021
atA>atC4501010
atA>atG1801815
atA>atM2022
atA>atR1010
atA>atT31401111
atA>atW1010
atC>atA1080259
atC>atG9055
atC>atM2022
atC>atT5890331232
atC>atY4043
atG>atA9509289
atG>atC120128
atG>atK9098
atG>atR2021
atG>atT2320214141
atT>atA34801312
atT>atC26003427
atT>atG120129
atT>atW2101212
atT>atY3033
cAa>cCa4601514
cAa>cGa4403418
cAa>cMa5054
cAa>cRa1010
cAa>cTa1801814
cAa>cWa1011
cAc>cGc3032
cAg>cCg21066
cAg>cGg2401914
cAg>cTg130108
cAg>cWg1011
cAt>cCt1011
cAt>cGt5605610
cAt>cMt5040
cAt>cRt3030
cAt>cTt4041
cAt>cWt1011
cCa>cAa2101313
cCa>cGa2011
cCa>cMa1011
cCa>cSa1011
cCa>cTa1650165112
cCa>cYa1501511
cCc>cAc1011
cCc>cGc2021
cCc>cTc182018231
cCc>cYc5052
cCg>cTg7076
cCg>cYg1011
cCt>cAt290127
cCt>cGt5052
cCt>cTt8126080536818
cCt>cYt2402410
cGa>cTa3031
cGc>cAc2002012
cGc>cTc9098
cGg>cAg6065
cGg>cCg3033
cGt>cAt1701712
cGt>cKt1010
cGt>cTt2402421
cTa>cAa1010
cTa>cCa9099
cTa>cWa1011
cTa>cYa2020
cTc>cAc3033
cTc>cCc3203229
cTc>cWc1010
cTc>cYc1011
cTg>cAg5055
cTg>cCg2022
cTg>cGg2022
cTg>cWg1010
cTt>cAt2502016
cTt>cCt1701512
cTt>cDt1011
cTt>cGt110107
cTt>cWt2022
cTt>cYt9092
caA>caC3301918
caA>caG42504535
caA>caM2022
caA>caR5051
caA>caT3701615
caA>caW1011
caC>caA1011
caC>caG1011
caC>caT30909839
caC>caY5051
caG>caA46005225
caG>caC2502321
caG>caK110116
caG>caR1011
caG>caT3264032113144
caT>caA9065
caT>caC358015232
caT>caG9097
caT>caK1010
caT>caY6064
ccA>ccC5701515
ccA>ccG9704942
ccA>ccM1010
ccA>ccR5053
ccA>ccT37203128
ccA>ccW2020
ccC>ccA4501311
ccC>ccG10099
ccC>ccM1011
ccC>ccT20708558
ccC>ccY3031
ccG>ccA5202316
ccG>ccC1001010
ccG>ccK5052
ccG>ccT149012299
ccT>ccA34901813
ccT>ccC15404941
ccT>ccG7001916
ccT>ccW3032
ccT>ccY5055
cgA>cgC5055
cgA>cgG6065
cgA>cgR1010
cgA>cgT26066
cgC>cgA1301010
cgC>cgT10303929
cgC>cgY1011
cgG>cgA3201313
cgG>cgC9099
cgG>cgR1011
cgG>cgT2701615
cgT>cgA6501010
cgT>cgC444037365
cgT>cgG16065
cgT>cgY4042
ctA>ctC4301010
ctA>ctG9801312
ctA>ctR1010
ctA>ctT16101716
ctA>ctW3031
ctC>ctA8401211
ctC>ctG5801511
ctC>ctM1011
ctC>ctT165601369244
ctC>ctY180186
ctG>ctA11502017
ctG>ctC2001010
ctG>ctK2022
ctG>ctT7104743
ctT>ctA33102014
ctT>ctC320010359
ctT>ctG19402713
ctT>ctK1011
ctT>ctY3032
gAa>gCa1501210
gAa>gGa6105433
gAa>gRa2021
gAa>gTa19099
gAa>gWa1010
gAc>gCc1301310
gAc>gGc1601210
gAc>gMc2020
gAc>gRc1010
gAc>gTc3032
gAg>gCg16065
gAg>gGg120129
gAg>gMg1011
gAg>gTg4044
gAg>gWg1011
gAt>gCt4001514
gAt>gGt6985068486752
gAt>gMt1011
gAt>gRt2602610
gAt>gTt1601512
gAt>gWt2022
gCa>gAa1301212
gCa>gGa11066
gCa>gMa1010
gCa>gTa3060302252
gCa>gYa160159
gCc>gAc9099
gCc>gGc7077
gCc>gTc8408460
gCc>gYc3030
gCg>gAg3033
gCg>gTg220229
gCg>gYg2021
gCt>gAt3502015
gCt>gGt6906969
gCt>gMt120127
gCt>gSt1011
gCt>gTt8530781510
gCt>gYt2402414
gGa>gAa200204
gGa>gKa1401411
gGa>gRa1010
gGa>gSa1010
gGa>gTa153015229
gGc>gAc188018825
gGc>gCc1011
gGc>gKc3031
gGc>gRc6062
gGc>gTc6063
gGg>gAg9098
gGg>gTg1011
gGt>gAt5103023
gGt>gCt8087
gGt>gKt4303119
gGt>gRt1011
gGt>gTt9400882147
gTa>gAa1011
gTa>gCa5102515
gTa>gGa5055
gTa>gYa2022
gTc>gAc2021
gTc>gCc7507069
gTc>gGc4044
gTc>gKc1010
gTc>gYc3033
gTg>gAg4044
gTg>gCg160118
gTg>gGg5055
gTg>gKg1011
gTg>gYg1011
gTt>gAt210108
gTt>gCt8904917
gTt>gGt3002017
gTt>gKt4004016
gTt>gWt2022
gTt>gYt2022
gaA>gaC680287
gaA>gaG48506339
gaA>gaM1011
gaA>gaR9097
gaA>gaT12601513
gaA>gaW1601414
gaC>gaA9507371
gaC>gaG5055
gaC>gaM2022
gaC>gaT9520457226
gaC>gaY140148
gaG>gaA42308560
gaG>gaC2501211
gaG>gaK7071
gaG>gaS1011
gaG>gaT9407866
gaT>gaA296019477
gaT>gaC7600179107
gaT>gaG5401816
gaT>gaW2021
gaT>gaY100108
gcA>gcC7701412
gcA>gcG6902619
gcA>gcR1010
gcA>gcT42506619
gcA>gcW110114
gcC>gcA14402219
gcC>gcG1501010
gcC>gcM2021
gcC>gcS1010
gcC>gcT415011158
gcC>gcY6063
gcG>gcA12801714
gcG>gcC2401911
gcG>gcK1010
gcG>gcR2022
gcG>gcT9405428
gcT>gcA47901514
gcT>gcC5880296154
gcT>gcG6901413
gcT>gcS1011
gcT>gcW2021
gcT>gcY9095
ggA>ggC200169
ggA>ggG7504223
ggA>ggR1010
ggA>ggT320013120
ggC>ggA5801817
ggC>ggG7077
ggC>ggT425010356
ggC>ggY2021
ggG>ggA8803126
ggG>ggC1501010
ggG>ggT2402415
ggT>ggA26601514
ggT>ggC30304230
ggT>ggG4601211
ggT>ggW1011
ggT>ggY3031
gtA>gtC7601010
gtA>gtG25207253
gtA>gtR3032
gtA>gtT41001512
gtC>gtA17509190
gtC>gtG38098
gtC>gtM1010
gtC>gtT5020217149
gtC>gtY7071
gtG>gtA25106952
gtG>gtC10402812
gtG>gtK6065
gtG>gtR3032
gtG>gtT288012990
gtT>gtA39201614
gtT>gtC35306445
gtT>gtG27201717
gtT>gtK1010
gtT>gtY2022
tAc>tCc5055
tAc>tGc2102119
tAc>tTc3201111
tAc>tWc1010
tAt>tCt1011
tAt>tGt11420113968
tAt>tMt1010
tAt>tRt1011
tAt>tTt2601110
tAt>tWt2020
tCa>tGa17077
tCa>tMa1010
tCa>tTa105901043727
tCa>tYa110113
tCc>tAc100109
tCc>tGc6066
tCc>tTc5005031
tCc>tYc6063
tCg>tAg3033
tCg>tGg1010
tCg>tTg3903933
tCg>tYg3031
tCt>tAt3903938
tCt>tGt100109
tCt>tMt8087
tCt>tTt2270227155
tCt>tYt220228
tGc>tAc130136
tGc>tTc10097
tGg>tCg2022
tGg>tKg2022
tGg>tTg2802821
tGt>tAt2202218
tGt>tCt3021
tGt>tKt5042
tGt>tRt1010
tGt>tTt3003020
tTa>tAa9097
tTa>tCa167101667174
tTa>tGa6065
tTa>tWa2021
tTa>tYa9094
tTc>tAc9065
tTc>tCc1401410
tTc>tGc1601110
tTc>tYc1010
tTg>tAg9099
tTg>tCg5055
tTg>tGg1010
tTg>tWg1010
tTg>tYg1011
tTt>tAt183013818
tTt>tCt4001514
tTt>tGt140149
tTt>tKt2022
tTt>tWt1010
tTt>tYt100105
taA>taG1010
taA>taR1010
taC>taA1010
taC>taT225601657613
taC>taY200208
taG>taT1010
taT>taA4042
taT>taC7990208100
taT>taG5405447
taT>taK4044
taT>taY3033
tcA>tcC8601010
tcA>tcG9203520
tcA>tcR3032
tcA>tcT38701916
tcA>tcW1010
tcC>tcA5301414
tcC>tcG8087
tcC>tcT3400182129
tcC>tcY5054
tcG>tcA2802220
tcG>tcC8088
tcG>tcT4803221
tcT>tcA41301612
tcT>tcC16603119
tcT>tcG2201110
tcT>tcY2022
tgA>tgG2021
tgC>tgA1011
tgC>tgT3310133101
tgC>tgY7072
tgG>tgA2020
tgG>tgC1011
tgG>tgK1010
tgG>tgR2020
tgG>tgT1901915
tgT>tgA3032
tgT>tgC35803320
tgT>tgG2022
tgT>tgK3032
tgT>tgY3032
ttA>ttC8001111
ttA>ttG9510588545
ttA>ttR4041
ttA>ttT29101712
ttA>ttW1011
ttC>ttA2401910
ttC>ttG100108
ttC>ttS2020
ttC>ttT7742774270667066
ttC>ttY320319
ttG>ttA43406551
ttG>ttC6001614
ttG>ttK160166
ttG>ttS1011
ttG>ttT141801287220
ttT>ttA5703617
ttT>ttC64005837
ttT>ttG5055
ttT>ttK5051
ttT>ttY2020

 
Rules used
codons
Affected Codons
Values: ttC>ttT