2019 Novel Coronavirus Resource (2019nCoVR)

Affected Codons

Statistics
Strain count
Strains total18696
Filtered set1287
Chart type: Bar (Switch to bar)
codonsVariation CountStrain Count
TotalIn Selected SetTotalIn Selected Set
AAc>TGc1011
AAt>CTt1010
ACa>GAa2022
AaA>CaT3033
Aaa>Caa2801411
Aaa>Gaa290196
Aaa>Maa2020
Aaa>Taa14077
Aaa>Waa1011
Aac>Cac7070
Aac>Gac4603013
Aac>Mac2020
Aac>Rac1010
Aac>Tac10085
Aac>Wac1010
Aag>Cag2901211
Aag>Gag2801611
Aag>Mag4041
Aag>Rag2021
Aag>Tag13086
Aag>Wag1010
Aat>Cat4701615
Aat>Gat11404211
Aat>Mat1011
Aat>Rat5050
Aat>Tat190169
Aat>Wat150152
Aca>Cca7076
Aca>Gca9503412
Aca>Rca2021
Aca>Tca330238
Aca>Wca1010
Acc>Ccc1011
Acc>Gcc200109
Acc>Rcc1010
Acc>Tcc9088
Acc>Wcc1011
Acg>Gcg220149
Acg>Rcg2022
Act>Cct17075
Act>Gct12305112
Act>Mct2022
Act>Rct3031
Act>Tct6001610
Act>Wct120121
Aga>Cga9101210
Aga>Gga110118
Aga>Tga2020
Agc>Ggc4003010
Agc>Rgc2021
Agg>Cgg32099
Agg>Ggg3030
Agg>Rgg1010
Agg>Tgg4043
Agt>Cgt710713
Agt>Ggt10904715
Agt>Mgt3603621
Agt>Rgt2020
Agt>Tgt250139
Agt>Wgt1011
Ata>Cta8080
Ata>Gta12405715
Ata>Rta2021
Ata>Tta2001512
Atc>Ctc1701212
Atc>Gtc6703110
Atc>Mtc1011
Atc>Ttc3030
Atg>Ctg150158
Atg>Gtg6305116
Atg>Mtg3030
Atg>Rtg3032
Atg>Ttg170128
Atg>Wtg1010
Att>Ctt3501410
Att>Gtt5000327271
Att>Mtt3031
Att>Rtt6061
Att>Ttt230137
CAT>TTG3033
CAa>ACa1011
CCa>AAa5055
CTt>GGt1010
Caa>Aaa6303612
Caa>Gaa6202411
Caa>Maa2020
Caa>Saa1010
Caa>Taa260207
Caa>Yaa9084
Cac>Aac13087
Cac>Gac1010
Cac>Tac9809713
Cac>Yac5050
Cag>Aag3901510
Cag>Gag2601210
Cag>Mag3031
Cag>Tag12066
Cag>Yag3032
Cat>Aat17099
Cat>Gat1010
Cat>Mat2021
Cat>Tat171016524
Cat>Yat100101
Cca>Aca2501410
Cca>Gca5053
Cca>Mca2020
Cca>Sca1010
Cca>Tca4940476339
Cca>Yca7072
Ccc>Acc8083
Ccc>Mcc1011
Ccc>Tcc3403410
Ccg>Acg2021
Ccg>Gcg1010
Ccg>Tcg2402417
Cct>Act190176
Cct>Gct19098
Cct>Mct5053
Cct>Tct170016125
Cct>Yct6051
Cga>Aga19099
Cga>Yga1010
Cgc>Agc6063
Cgc>Ggc1010
Cgc>Tgc240247
Cgc>Ygc4041
Cgg>Agg20055
Cgg>Tgg5052
Cgt>Agt62088
Cgt>Ggt1010
Cgt>Tgt167016462
Cgt>Ygt4040
Cta>Ata340169
Cta>Gta2022
Cta>Tta822049836
Cta>Yta5051
Ctc>Atc3030
Ctc>Gtc1011
Ctc>Mtc8080
Ctc>Ttc193011731
Ctc>Ytc6060
Ctg>Atg7071
Ctg>Gtg8080
Ctg>Mtg1010
Ctg>Ttg17208042
Ctg>Ytg1010
Ctt>Att380317
Ctt>Gtt200105
Ctt>Stt3033
Ctt>Ttt625037359
Ctt>Ytt160167
GAa>CCa3033
GCt>AGt2020
GGa>TTa2020
GGt>TTt2020
GTg>CAg1010
GTt>CAt5051
Gaa>Aaa8405117
Gaa>Caa3302013
Gaa>Kaa3031
Gaa>Raa8081
Gaa>Saa1010
Gaa>Taa190189
Gac>Aac294028212
Gac>Cac170178
Gac>Kac3032
Gac>Sac2020
Gac>Tac116011530
Gag>Aag350196
Gag>Cag9098
Gag>Dag1010
Gag>Rag1011
Gag>Tag10095
Gat>Aat7305011
Gat>Cat3603511
Gat>Kat130123
Gat>Rat3030
Gat>Tat190017817
Gca>Aca245021143
Gca>Cca1501010
Gca>Kca4041
Gca>Rca100101
Gca>Tca10606619
Gcc>Acc400309
Gcc>Ccc10055
Gcc>Kcc1011
Gcc>Rcc4040
Gcc>Tcc160134
Gcg>Acg1801310
Gcg>Kcg1011
Gcg>Tcg210213
Gct>Act16508918
Gct>Cct24088
Gct>Kct240223
Gct>Rct8082
Gct>Sct2021
Gct>Tct200015035
Gga>Aga320326
Gga>Cga16470164738
Gga>Rga160161
Gga>Sga100101
Gga>Tga6061
Ggc>Agc350358
Ggc>Cgc3030
Ggc>Kgc1011
Ggc>Rgc2021
Ggc>Sgc1010
Ggc>Tgc390393
Ggg>Agg8088
Ggg>Tgg1010
Ggt>Agt281024437
Ggt>Cgt4031
Ggt>Kgt7072
Ggt>Rgt100102
Ggt>Tgt6606526
Gta>Ata3150202163
Gta>Cta6061
Gta>Kta9084
Gta>Rta1010
Gta>Tta304029952
Gtc>Atc7202715
Gtc>Ctc6060
Gtc>Ktc1010
Gtc>Rtc2021
Gtc>Stc2020
Gtc>Ttc4504517
Gtg>Atg5302210
Gtg>Ctg18901892
Gtg>Stg1010
Gtg>Ttg114011414
Gtt>Att327011429
Gtt>Ctt4502011
Gtt>Ktt100103
Gtt>Rtt4041
Gtt>Stt2020
Gtt>Ttt232022919
TAt>GTt7071
TGc>GAc1011
TTa>AAa1010
TTa>CAa1011
TTa>CCa1011
TTg>GGg2021
TTt>CAt2020
TTt>CCt1011
Tac>Aac160154
Tac>Cac4903913
Tac>Gac2021
Tac>Yac140142
Tat>Aat9096
Tat>Cat1901913
Tat>Gat5054
Tat>Kat1010
Tat>Yat3030
Tca>Aca4701412
Tca>Cca6403426
Tca>Gca5301810
Tca>Kca1010
Tca>Wca1011
Tca>Yca4040
Tcc>Acc1201110
Tcc>Ccc5052
Tcc>Gcc2601210
Tcc>Wcc3031
Tcc>Ycc1010
Tcg>Acg13088
Tcg>Gcg10055
Tct>Act420119
Tct>Cct2602110
Tct>Gct6701810
Tct>Wct1010
Tga>Aga1010
Tgc>Agc1011
Tgc>Cgc5055
Tgc>Ggc6065
Tgc>Wgc1010
Tgc>Ygc1011
Tgg>Agg5050
Tgg>Cgg1010
Tgg>Wgg2020
Tgt>Agt14097
Tgt>Cgt1010
Tgt>Ggt1010
Tgt>Kgt1010
Tgt>Ygt3031
Tta>Ata620169
Tta>Cta60105125
Tta>Gta2401110
Tta>Kta1011
Tta>Yta5051
Ttc>Atc3032
Ttc>Ctc890797
Ttc>Gtc8087
Ttc>Ktc1010
Ttc>Ytc3030
Ttg>Atg370119
Ttg>Ctg5670206160
Ttg>Gtg160158
Ttg>Ytg8083
Ttt>Att17096
Ttt>Ctt230020516
Ttt>Gtt2701911
Ttt>Ktt1011
Ttt>Wtt2020
Ttt>Ytt3030
aAa>aCa1901110
aAa>aGa10205518
aAa>aRa1011
aAa>aTa19086
aAa>aWa2021
aAc>aCc210119
aAc>aGc5103011
aAc>aMc2020
aAc>aRc1011
aAc>aTc8086
aAc>aWc3030
aAg>aCg1801210
aAg>aGg223020640
aAg>aMg1010
aAg>aRg5051
aAg>aTg18087
aAg>aWg1011
aAt>aCt11605015
aAt>aGt11707337
aAt>aMt2020
aAt>aRt6061
aAt>aTt9085
aAt>aWt4042
aCa>aAa1640146130
aCa>aBa1010
aCa>aGa150109
aCa>aMa3030
aCa>aTa345033359
aCa>aYa210217
aCc>aAc12076
aCc>aGc9088
aCc>aTc26970266370
aCc>aYc6062
aCg>aAg1011
aCg>aGg4044
aCg>aTg276027428
aCg>aYg4042
aCt>aAt720569
aCt>aGt330109
aCt>aSt1010
aCt>aTt6910611122
aCt>aYt240244
aGA>aAC2022
aGa>aAa8303411
aGa>aCa2902411
aGa>aKa4042
aGa>aRa6061
aGa>aSa2021
aGa>aTa460467
aGc>aAc150107
aGc>aCc7075
aGc>aKc1011
aGc>aRc2021
aGc>aSc1010
aGc>aTc190192
aGg>aAg17150170752
aGg>aCg1011
aGg>aKg2020
aGg>aRg9090
aGg>aTg4040
aGt>aAt13307514
aGt>aCt9504112
aGt>aKt110112
aGt>aRt1010
aGt>aSt3503521
aGt>aTt154014942
aTa>aAa3030
aTa>aCa9206611
aTa>aGa7066
aTa>aYa2021
aTc>aAc1011
aTc>aCc6206112
aTc>aGc1010
aTc>aYc2020
aTg>aAg4040
aTg>aCg210210
aTg>aDg1010
aTg>aGg4043
aTg>aKg2021
aTt>aAt7077
aTt>aCt7404417
aTt>aGt4040
aTt>aWt1010
aTt>aYt6062
aaA>aaC3101915
aaA>aaG762013541
aaA>aaM1010
aaA>aaR6061
aaA>aaT4201810
aaA>aaW2021
aaC>aaA130136
aaC>aaG7077
aaC>aaM2022
aaC>aaT1281071549
aaC>aaY240226
aaG>aaA66104413
aaG>aaC150152
aaG>aaK4042
aaG>aaR3032
aaG>aaT168015115
aaT>aaA6101611
aaT>aaC761015827
aaT>aaG160117
aaT>aaK1011
aaT>aaW3031
aaT>aaY9094
acA>acC12701110
acA>acG205012416
acA>acM2020
acA>acR4043
acA>acT56902713
acA>acW1010
acC>acA11701612
acC>acG10055
acC>acM2020
acC>acT379020734
acC>acY130134
acG>acA14702511
acG>acC6065
acG>acK1010
acG>acR3031
acG>acT9506216
acT>acA52402013
acT>acC406011621
acT>acG7502510
acT>acW2021
acT>acY7071
agA>agC23087
agA>agG19703012
agA>agM1010
agA>agR7074
agA>agT4101310
agC>agA5605650
agC>agM4043
agC>agT17970170083
agC>agY2020
agG>agA18410166449
agG>agC1011
agG>agK2022
agG>agR100100
agG>agT2902410
agT>agA420119
agT>agC15002816
agT>agG9074
agT>agW1010
agT>agY2021
atA>atC450109
atA>atG180189
atA>atM2020
atA>atR1011
atA>atT31401110
atA>atW1010
atC>atA10802520
atC>atG9055
atC>atM2021
atC>atT589033131
atC>atY4041
atG>atA9509210
atG>atC120126
atG>atK9091
atG>atR2021
atG>atT232021469
atT>atA34801311
atT>atC26003417
atT>atG120128
atT>atW210120
atT>atY3030
cAa>cCa460159
cAa>cGa440349
cAa>cMa5050
cAa>cRa1011
cAa>cTa1801812
cAa>cWa1010
cAc>cGc3031
cAg>cCg21066
cAg>cGg240196
cAg>cTg130109
cAg>cWg1011
cAt>cCt1010
cAt>cGt5605642
cAt>cMt5042
cAt>cRt3033
cAt>cTt4043
cAt>cWt1010
cCa>cAa210139
cCa>cGa2011
cCa>cMa1010
cCa>cSa1010
cCa>cTa165016536
cCa>cYa150151
cCc>cAc1011
cCc>cGc2021
cCc>cTc1820182127
cCc>cYc5051
cCg>cTg7070
cCg>cYg1010
cCt>cAt290125
cCt>cGt5054
cCt>cTt812608053170
cCt>cYt240244
cGa>cTa3033
cGc>cAc200203
cGc>cTc9095
cGg>cAg6063
cGg>cCg3031
cGt>cAt170174
cGt>cKt1011
cGt>cTt240241
cTa>cAa1011
cTa>cCa9098
cTa>cWa1010
cTa>cYa2022
cTc>cAc3030
cTc>cCc320321
cTc>cWc1011
cTc>cYc1010
cTg>cAg5055
cTg>cCg2020
cTg>cGg2021
cTg>cWg1011
cTt>cAt250206
cTt>cCt170154
cTt>cDt1010
cTt>cGt110106
cTt>cWt2020
cTt>cYt9097
caA>caC3301910
caA>caG42504518
caA>caM2020
caA>caR5053
caA>caT3701611
caA>caW1010
caC>caA1010
caC>caG1010
caC>caT30909855
caC>caY5051
caG>caA46005213
caG>caC2502311
caG>caK110111
caG>caR1010
caG>caT32640321171
caT>caA9064
caT>caC358015223
caT>caG9095
caT>caK1010
caT>caY6060
ccA>ccC5701510
ccA>ccG9704914
ccA>ccM1010
ccA>ccR5052
ccA>ccT37203112
ccA>ccW2022
ccC>ccA4501312
ccC>ccG10099
ccC>ccM1010
ccC>ccT20708535
ccC>ccY3031
ccG>ccA5202314
ccG>ccC1001010
ccG>ccK5050
ccG>ccT149012217
ccT>ccA34901814
ccT>ccC15404913
ccT>ccG7001911
ccT>ccW3031
ccT>ccY5051
cgA>cgC5053
cgA>cgG6066
cgA>cgR1010
cgA>cgT26065
cgC>cgA130109
cgC>cgT10303913
cgC>cgY1010
cgG>cgA320139
cgG>cgC9099
cgG>cgR1010
cgG>cgT270169
cgT>cgA650109
cgT>cgC4440373317
cgT>cgG16065
cgT>cgY4040
ctA>ctC4301010
ctA>ctG9801310
ctA>ctR1011
ctA>ctT16101711
ctA>ctW3032
ctC>ctA8401210
ctC>ctG5801513
ctC>ctM1010
ctC>ctT165601369106
ctC>ctY180189
ctG>ctA11502010
ctG>ctC2001010
ctG>ctK2020
ctG>ctT7104713
ctT>ctA33102013
ctT>ctC320010340
ctT>ctG19402710
ctT>ctK1010
ctT>ctY3031
gAa>gCa150124
gAa>gGa6105419
gAa>gRa2021
gAa>gTa19097
gAa>gWa1011
gAc>gCc130138
gAc>gGc1601210
gAc>gMc2021
gAc>gRc1011
gAc>gTc3032
gAg>gCg16066
gAg>gGg120127
gAg>gMg1010
gAg>gTg4041
gAg>gWg1010
gAt>gCt400158
gAt>gGt698506848160
gAt>gMt1010
gAt>gRt260264
gAt>gTt160157
gAt>gWt2020
gCa>gAa1301210
gCa>gGa11066
gCa>gMa1011
gCa>gTa306030221
gCa>gYa160152
gCc>gAc9099
gCc>gGc7076
gCc>gTc8408414
gCc>gYc3032
gCg>gAg3033
gCg>gTg220223
gCg>gYg2020
gCt>gAt350207
gCt>gGt690697
gCt>gMt120125
gCt>gSt1010
gCt>gTt8530781185
gCt>gYt240245
gGa>gAa200200
gGa>gKa140140
gGa>gRa1011
gGa>gSa1011
gGa>gTa15301528
gGc>gAc188018814
gGc>gCc1010
gGc>gKc3032
gGc>gRc6062
gGc>gTc6062
gGg>gAg9094
gGg>gTg1011
gGt>gAt5103015
gGt>gCt8084
gGt>gKt430318
gGt>gRt1010
gGt>gTt9400882713
gTa>gAa1010
gTa>gCa5102518
gTa>gGa5055
gTa>gYa2020
gTc>gAc2021
gTc>gCc7507010
gTc>gGc4044
gTc>gKc1010
gTc>gYc3030
gTg>gAg4043
gTg>gCg160117
gTg>gGg5055
gTg>gKg1010
gTg>gYg1011
gTt>gAt210108
gTt>gCt8904914
gTt>gGt300209
gTt>gKt4004020
gTt>gWt2021
gTt>gYt2020
gaA>gaC6802822
gaA>gaG48506313
gaA>gaM1010
gaA>gaR9092
gaA>gaT12601510
gaA>gaW160140
gaC>gaA9507310
gaC>gaG5055
gaC>gaM2020
gaC>gaT952045744
gaC>gaY140145
gaG>gaA42308529
gaG>gaC2501210
gaG>gaK7074
gaG>gaS1010
gaG>gaT9407824
gaT>gaA296019410
gaT>gaC760017935
gaT>gaG5401810
gaT>gaW2020
gaT>gaY100101
gcA>gcC7701412
gcA>gcG6902611
gcA>gcR1011
gcA>gcT42506613
gcA>gcW110115
gcC>gcA14402213
gcC>gcG150109
gcC>gcM2021
gcC>gcS1011
gcC>gcT415011123
gcC>gcY6060
gcG>gcA12801711
gcG>gcC240199
gcG>gcK1010
gcG>gcR2020
gcG>gcT9405424
gcT>gcA47901510
gcT>gcC588029633
gcT>gcG6901411
gcT>gcS1011
gcT>gcW2021
gcT>gcY9093
ggA>ggC2001613
ggA>ggG7504219
ggA>ggR1010
ggA>ggT320013112
ggC>ggA5801810
ggC>ggG7077
ggC>ggT425010319
ggC>ggY2022
ggG>ggA8803115
ggG>ggC150109
ggG>ggT2402412
ggT>ggA26601510
ggT>ggC30304216
ggT>ggG4601211
ggT>ggW1010
ggT>ggY3032
gtA>gtC7601010
gtA>gtG25207226
gtA>gtR3030
gtA>gtT41001514
gtC>gtA1750919
gtC>gtG38098
gtC>gtM1010
gtC>gtT502021752
gtC>gtY7073
gtG>gtA25106912
gtG>gtC10402825
gtG>gtK6061
gtG>gtR3030
gtG>gtT288012932
gtT>gtA39201611
gtT>gtC35306420
gtT>gtG27201710
gtT>gtK1011
gtT>gtY2020
tAc>tCc5055
tAc>tGc210211
tAc>tTc3201110
tAc>tWc1011
tAt>tCt1010
tAt>tGt11420113931
tAt>tMt1011
tAt>tRt1010
tAt>tTt2601110
tAt>tWt2022
tCa>tGa17077
tCa>tMa1011
tCa>tTa10590104369
tCa>tYa110112
tCc>tAc100109
tCc>tGc6066
tCc>tTc500508
tCc>tYc6063
tCg>tAg3033
tCg>tGg1010
tCg>tTg390397
tCg>tYg3030
tCt>tAt390396
tCt>tGt100106
tCt>tMt8080
tCt>tTt227022734
tCt>tYt220228
tGc>tAc130137
tGc>tTc10095
tGg>tCg2020
tGg>tKg2020
tGg>tTg280283
tGt>tAt220225
tGt>tCt3021
tGt>tKt5042
tGt>tRt1011
tGt>tTt3003012
tTa>tAa9093
tTa>tCa16710166777
tTa>tGa6066
tTa>tWa2021
tTa>tYa9092
tTc>tAc9065
tTc>tCc1401412
tTc>tGc160116
tTc>tYc1011
tTg>tAg9099
tTg>tCg5054
tTg>tGg1011
tTg>tWg1011
tTg>tYg1010
tTt>tAt183013812
tTt>tCt4001511
tTt>tGt140147
tTt>tKt2020
tTt>tWt1011
tTt>tYt100106
taA>taG1011
taA>taR1011
taC>taA1010
taC>taT225601657866
taC>taY200204
taG>taT1011
taT>taA4041
taT>taC799020823
taT>taG540543
taT>taK4040
taT>taY3030
tcA>tcC860109
tcA>tcG9203510
tcA>tcR3030
tcA>tcT38701910
tcA>tcW1010
tcC>tcA530148
tcC>tcG8086
tcC>tcT340018231
tcC>tcY5051
tcG>tcA2802211
tcG>tcC8088
tcG>tcT4803220
tcT>tcA41301612
tcT>tcC16603119
tcT>tcG2201110
tcT>tcY2020
tgA>tgG2021
tgC>tgA1010
tgC>tgT331013325
tgC>tgY7073
tgG>tgA2021
tgG>tgC1010
tgG>tgK1011
tgG>tgR2022
tgG>tgT190191
tgT>tgA3031
tgT>tgC35803321
tgT>tgG2020
tgT>tgK3031
tgT>tgY3031
ttA>ttC800119
ttA>ttG951058846
ttA>ttR4042
ttA>ttT29101714
ttA>ttW1010
ttC>ttA2401910
ttC>ttG100108
ttC>ttS2021
ttC>ttT774207066220
ttC>ttY3203110
ttG>ttA43406519
ttG>ttC6001612
ttG>ttK160162
ttG>ttS1011
ttG>ttT1418141812871287
ttT>ttA5703621
ttT>ttC64005818
ttT>ttG5053
ttT>ttK5053
ttT>ttY2021

 
Rules used
codons
Affected Codons
Values: ttG>ttT